FFCP PHASE1:Mm9::chr15:75397594..75397605,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=23934|HGNC=|MCL_coexpression_id=13|UniProt=Q8K356,Q9WUC3|association_with_transcript=6bp_to_NM_011837,uc007wgv.2_5end|description=CAGE_peak_7_at_Ly6h_5end|id=chr15:75397594..75397605,-|ontology_enrichment_celltype=CL:0000117!1.53e-16!23;CL:0000337!1.53e-16!23;CL:0000540!5.28e-11!33;CL:0000047!5.28e-11!33;CL:0000031!5.28e-11!33;CL:0000404!5.28e-11!33;CL:0000393!8.38e-08!39;CL:0000211!8.38e-08!39;CL:0000221!8.58e-08!44;CL:0000133!8.58e-08!44;CL:0002319!1.91e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-31,23;CL:0000337,1.01e-31,23;CL:0000540,2.60e-20,33;CL:0000047,2.60e-20,33;CL:0000031,2.60e-20,33;CL:0000404,2.60e-20,33;CL:0000393,2.71e-16,39;CL:0000211,2.71e-16,39;CL:0002319,3.02e-14,43;CL:0000221,8.56e-14,44;CL:0000133,8.56e-14,44;CL:0002609,5.83e-10,6;CL:0002613,3.62e-07,3;CL:0000120,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.26e-30!52;UBERON:0005068!4.26e-30!52;UBERON:0006241!4.26e-30!52;UBERON:0007135!4.26e-30!52;UBERON:0001017!1.32e-27!73;UBERON:0005743!1.32e-27!73;UBERON:0000073!3.49e-26!75;UBERON:0001016!3.49e-26!75;UBERON:0000955!4.89e-26!50;UBERON:0006238!4.89e-26!50;UBERON:0003080!1.27e-25!40;UBERON:0002616!2.13e-25!49;UBERON:0002780!5.43e-25!39;UBERON:0001890!5.43e-25!39;UBERON:0006240!5.43e-25!39;UBERON:0002346!9.04e-25!71;UBERON:0003075!9.04e-25!71;UBERON:0007284!9.04e-25!71;UBERON:0002020!5.50e-23!34;UBERON:0000033!1.09e-22!63;UBERON:0003056!2.68e-22!49;UBERON:0004121!5.16e-21!102;UBERON:0000924!5.16e-21!102;UBERON:0006601!5.16e-21!102;UBERON:0002791!8.89e-19!29;UBERON:0003528!8.89e-19!29;UBERON:0001893!8.89e-19!29;UBERON:0007811!8.29e-16!86;UBERON:0000153!3.08e-15!94;UBERON:0000956!8.25e-13!21;UBERON:0001869!8.25e-13!21;UBERON:0000203!8.25e-13!21;UBERON:0002619!6.33e-10!17;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0001894!4.56e-07!10;UBERON:0006222!4.56e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.22e-49,54;UBERON:0001049,6.41e-49,52;UBERON:0005068,6.41e-49,52;UBERON:0006241,6.41e-49,52;UBERON:0007135,6.41e-49,52;UBERON:0002020,7.63e-47,34;UBERON:0003080,6.44e-46,40;UBERON:0002780,1.41e-44,39;UBERON:0001890,1.41e-44,39;UBERON:0006240,1.41e-44,39;UBERON:0001017,1.42e-42,73;UBERON:0000955,1.84e-42,47;UBERON:0006238,1.84e-42,47;UBERON:0001016,3.73e-41,75;UBERON:0002616,3.75e-41,46;UBERON:0002346,7.36e-38,64;UBERON:0003075,7.36e-38,64;UBERON:0007284,7.36e-38,64;UBERON:0003528,8.60e-38,29;UBERON:0002791,8.60e-38,29;UBERON:0001893,8.60e-38,29;UBERON:0003056,8.03e-36,49;UBERON:0010371,5.97e-32,73;UBERON:0004121,3.04e-30,95;UBERON:0000924,3.04e-30,95;UBERON:0006601,3.04e-30,95;UBERON:0000956,3.95e-27,21;UBERON:0001869,3.95e-27,21;UBERON:0000203,3.95e-27,21;UBERON:0010314,2.84e-23,92;UBERON:0002619,7.06e-21,17;UBERON:0000025,7.57e-17,114;UBERON:0002021,7.61e-17,10;UBERON:0000411,7.61e-17,10;UBERON:0001950,7.61e-17,10;UBERON:0004111,4.35e-15,122;UBERON:0002420,1.99e-11,8;UBERON:0007245,1.99e-11,8;UBERON:0010009,1.99e-11,8;UBERON:0010011,1.99e-11,8;UBERON:0000454,1.99e-11,8;UBERON:0001948,6.21e-10,5;UBERON:0002315,6.21e-10,5;UBERON:0011216,2.57e-09,194;UBERON:0002240,3.49e-08,6;UBERON:0005174,3.49e-08,6;UBERON:0001137,3.49e-08,6;UBERON:0001894,7.66e-08,10;UBERON:0006222,7.66e-08,10;UBERON:0000483,1.20e-07,174;UBERON:0000119,1.89e-07,176;UBERON:0002950,4.08e-07,4;UBERON:0001891,4.08e-07,4;UBERON:0009616,4.08e-07,4;UBERON:0010286,4.08e-07,4;UBERON:0000369,4.54e-07,5;UBERON:0002435,4.54e-07,5;UBERON:0000204,4.54e-07,5;UBERON:0010082,4.54e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,4.45519596494579,3.15487442027073,4.85606673486466,6.40518768759679,2.9397791811589,1.72521847832825,1.83843757322004,0,1.53224805702225,0.921639199537461,5.40733779693795,5.48925861614458,6.25096044668112,1.67509799400829,3.37657566019008,3.81995619442025,5.59794312399969,2.98980529678116,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,4.52355667606312,3.82413504423008,1.79000820131231,3.32460871295296,3.73154905055843,0.509196819251581,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.15434922846191,5.35103984372279,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,1.28528526568723,0,1.24645922567079,0.651547837414304,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,1.24138163549592,2.31879462882692,2.46823530903181,8.52501857520878,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,4.14292712856459,3.43737308063638,2.06223818812425,3.42541259885321,3.7769694869485,4.72515750162264,2.70192721934532,3.17199686288943,1.55328093525546,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,1.10306105070008,0.44449345560323,0.412070114477788,0,0,0,0.377252682772152,0.936415074698824,0.640251524048693,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.70990322463735,0.238436189947321,0.726732083161643,0.846984423737976,0.592302255241736,0.548783918618318,0.263069711437843,0.407412341537585,0,0.474540072496697,0.985044823755635,0,0.77468420592983,0.385813221962283,3.2475375131933,1.40358965067245,0.429742108096597,0.956441660344217,0.220591419119515,0.695603506861264|short_description=p7@Ly6h}} | ||
|EntrezGene=23934 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q8K356,Q9WUC3 | |||
|association_with_transcript=6bp_to_NM_011837,uc007wgv.2_5end | |||
|description=CAGE_peak_7_at_Ly6h_5end | |||
|id=chr15:75397594..75397605,- | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-16!23;CL:0000337!1.53e-16!23;CL:0000540!5.28e-11!33;CL:0000047!5.28e-11!33;CL:0000031!5.28e-11!33;CL:0000404!5.28e-11!33;CL:0000393!8.38e-08!39;CL:0000211!8.38e-08!39;CL:0000221!8.58e-08!44;CL:0000133!8.58e-08!44;CL:0002319!1.91e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-31,23;CL:0000337,1.01e-31,23;CL:0000540,2.60e-20,33;CL:0000047,2.60e-20,33;CL:0000031,2.60e-20,33;CL:0000404,2.60e-20,33;CL:0000393,2.71e-16,39;CL:0000211,2.71e-16,39;CL:0002319,3.02e-14,43;CL:0000221,8.56e-14,44;CL:0000133,8.56e-14,44;CL:0002609,5.83e-10,6;CL:0002613,3.62e-07,3;CL:0000120,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.26e-30!52;UBERON:0005068!4.26e-30!52;UBERON:0006241!4.26e-30!52;UBERON:0007135!4.26e-30!52;UBERON:0001017!1.32e-27!73;UBERON:0005743!1.32e-27!73;UBERON:0000073!3.49e-26!75;UBERON:0001016!3.49e-26!75;UBERON:0000955!4.89e-26!50;UBERON:0006238!4.89e-26!50;UBERON:0003080!1.27e-25!40;UBERON:0002616!2.13e-25!49;UBERON:0002780!5.43e-25!39;UBERON:0001890!5.43e-25!39;UBERON:0006240!5.43e-25!39;UBERON:0002346!9.04e-25!71;UBERON:0003075!9.04e-25!71;UBERON:0007284!9.04e-25!71;UBERON:0002020!5.50e-23!34;UBERON:0000033!1.09e-22!63;UBERON:0003056!2.68e-22!49;UBERON:0004121!5.16e-21!102;UBERON:0000924!5.16e-21!102;UBERON:0006601!5.16e-21!102;UBERON:0002791!8.89e-19!29;UBERON:0003528!8.89e-19!29;UBERON:0001893!8.89e-19!29;UBERON:0007811!8.29e-16!86;UBERON:0000153!3.08e-15!94;UBERON:0000956!8.25e-13!21;UBERON:0001869!8.25e-13!21;UBERON:0000203!8.25e-13!21;UBERON:0002619!6.33e-10!17;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0001894!4.56e-07!10;UBERON:0006222!4.56e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.22e-49,54;UBERON:0001049,6.41e-49,52;UBERON:0005068,6.41e-49,52;UBERON:0006241,6.41e-49,52;UBERON:0007135,6.41e-49,52;UBERON:0002020,7.63e-47,34;UBERON:0003080,6.44e-46,40;UBERON:0002780,1.41e-44,39;UBERON:0001890,1.41e-44,39;UBERON:0006240,1.41e-44,39;UBERON:0001017,1.42e-42,73;UBERON:0000955,1.84e-42,47;UBERON:0006238,1.84e-42,47;UBERON:0001016,3.73e-41,75;UBERON:0002616,3.75e-41,46;UBERON:0002346,7.36e-38,64;UBERON:0003075,7.36e-38,64;UBERON:0007284,7.36e-38,64;UBERON:0003528,8.60e-38,29;UBERON:0002791,8.60e-38,29;UBERON:0001893,8.60e-38,29;UBERON:0003056,8.03e-36,49;UBERON:0010371,5.97e-32,73;UBERON:0004121,3.04e-30,95;UBERON:0000924,3.04e-30,95;UBERON:0006601,3.04e-30,95;UBERON:0000956,3.95e-27,21;UBERON:0001869,3.95e-27,21;UBERON:0000203,3.95e-27,21;UBERON:0010314,2.84e-23,92;UBERON:0002619,7.06e-21,17;UBERON:0000025,7.57e-17,114;UBERON:0002021,7.61e-17,10;UBERON:0000411,7.61e-17,10;UBERON:0001950,7.61e-17,10;UBERON:0004111,4.35e-15,122;UBERON:0002420,1.99e-11,8;UBERON:0007245,1.99e-11,8;UBERON:0010009,1.99e-11,8;UBERON:0010011,1.99e-11,8;UBERON:0000454,1.99e-11,8;UBERON:0001948,6.21e-10,5;UBERON:0002315,6.21e-10,5;UBERON:0011216,2.57e-09,194;UBERON:0002240,3.49e-08,6;UBERON:0005174,3.49e-08,6;UBERON:0001137,3.49e-08,6;UBERON:0001894,7.66e-08,10;UBERON:0006222,7.66e-08,10;UBERON:0000483,1.20e-07,174;UBERON:0000119,1.89e-07,176;UBERON:0002950,4.08e-07,4;UBERON:0001891,4.08e-07,4;UBERON:0009616,4.08e-07,4;UBERON:0010286,4.08e-07,4;UBERON:0000369,4.54e-07,5;UBERON:0002435,4.54e-07,5;UBERON:0000204,4.54e-07,5;UBERON:0010082,4.54e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,4.45519596494579,3.15487442027073,4.85606673486466,6.40518768759679,2.9397791811589,1.72521847832825,1.83843757322004,0,1.53224805702225,0.921639199537461,5.40733779693795,5.48925861614458,6.25096044668112,1.67509799400829,3.37657566019008,3.81995619442025,5.59794312399969,2.98980529678116,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.470354828542819,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,4.52355667606312,3.82413504423008,1.79000820131231,3.32460871295296,3.73154905055843,0.509196819251581,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.15434922846191,5.35103984372279,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,1.28528526568723,0,1.24645922567079,0.651547837414304,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.18006109403131,0.776152102696527,0.857348140126369,1.24138163549592,2.31879462882692,2.46823530903181,8.52501857520878,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0,0,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,3.95326289831947,4.14292712856459,3.43737308063638,2.06223818812425,3.42541259885321,3.7769694869485,4.72515750162264,2.70192721934532,3.17199686288943,1.55328093525546,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,1.10306105070008,0.44449345560323,0.412070114477788,0,0,0,0.377252682772152,0.936415074698824,0.640251524048693,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.70990322463735,0.238436189947321,0.726732083161643,0.846984423737976,0.592302255241736,0.548783918618318,0.263069711437843,0.407412341537585,0,0.474540072496697,0.985044823755635,0,0.77468420592983,0.385813221962283,3.2475375131933,1.40358965067245,0.429742108096597,0.956441660344217,0.220591419119515,0.695603506861264 | |||
|short_description=p7@Ly6h | |||
}} |
Revision as of 10:54, 13 September 2013
Short description: | p7@Ly6h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ly6h_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 6bp_to_NM_011837, uc007wgv.2_5end |
EntrezGene: | Ly6h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-31 | 23 |
neuron | 2.60e-20 | 33 |
neuronal stem cell | 2.60e-20 | 33 |
neuroblast | 2.60e-20 | 33 |
electrically signaling cell | 2.60e-20 | 33 |
electrically responsive cell | 2.71e-16 | 39 |
electrically active cell | 2.71e-16 | 39 |
neural cell | 3.02e-14 | 43 |
ectodermal cell | 8.56e-14 | 44 |
neurectodermal cell | 8.56e-14 | 44 |
neuron of cerebral cortex | 5.83e-10 | 6 |
striatum neuron | 3.62e-07 | 3 |
granule cell | 7.35e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.