FFCP PHASE1:Mm9::chr15:25294581..25294593,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25294581..25294593,-|id=chr15:25294581..25294593,-|ontology_enrichment_celltype=CL:0000117!4.44e-23!23;CL:0000337!4.44e-23!23;CL:0000540!2.76e-18!33;CL:0000047!2.76e-18!33;CL:0000031!2.76e-18!33;CL:0000404!2.76e-18!33;CL:0000393!4.04e-14!39;CL:0000211!4.04e-14!39;CL:0000221!1.30e-13!44;CL:0000133!1.30e-13!44;CL:0002319!4.04e-13!43;CL:0000055!4.30e-10!50;CL:0002609!6.57e-08!6;CL:0002321!1.36e-07!70;CL:0000220!1.36e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-32,23;CL:0000337,1.10e-32,23;CL:0000540,3.37e-22,33;CL:0000047,3.37e-22,33;CL:0000031,3.37e-22,33;CL:0000404,3.37e-22,33;CL:0000393,1.76e-18,39;CL:0000211,1.76e-18,39;CL:0002319,1.42e-16,43;CL:0000221,3.74e-16,44;CL:0000133,3.74e-16,44;CL:0000120,2.39e-15,3;CL:0002613,1.35e-14,3;CL:0002321,3.74e-11,70;CL:0000723,6.00e-08,91;CL:0000048,6.00e-08,91;CL:0002609,1.09e-07,6;CL:0000034,2.58e-07,97;CL:0002612,3.89e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.37e-24!34;UBERON:0002791!6.81e-19!29;UBERON:0003528!6.81e-19!29;UBERON:0001893!6.81e-19!29;UBERON:0001017!1.65e-15!73;UBERON:0005743!1.65e-15!73;UBERON:0000073!9.38e-15!75;UBERON:0001016!9.38e-15!75;UBERON:0001049!2.32e-13!52;UBERON:0005068!2.32e-13!52;UBERON:0006241!2.32e-13!52;UBERON:0007135!2.32e-13!52;UBERON:0000956!3.10e-13!21;UBERON:0001869!3.10e-13!21;UBERON:0000203!3.10e-13!21;UBERON:0002616!3.11e-12!49;UBERON:0004121!3.84e-12!102;UBERON:0000924!3.84e-12!102;UBERON:0006601!3.84e-12!102;UBERON:0002780!5.92e-12!39;UBERON:0001890!5.92e-12!39;UBERON:0006240!5.92e-12!39;UBERON:0002346!5.98e-12!71;UBERON:0003075!5.98e-12!71;UBERON:0007284!5.98e-12!71;UBERON:0000955!8.28e-12!50;UBERON:0006238!8.28e-12!50;UBERON:0003056!1.48e-11!49;UBERON:0000033!1.79e-11!63;UBERON:0003080!1.85e-11!40;UBERON:0002619!3.84e-11!17;UBERON:0007811!3.23e-08!86;UBERON:0002021!4.10e-07!10;UBERON:0000411!4.10e-07!10;UBERON:0001950!4.10e-07!10;UBERON:0002420!6.93e-07!8;UBERON:0007245!6.93e-07!8;UBERON:0010009!6.93e-07!8;UBERON:0010011!6.93e-07!8;UBERON:0000454!6.93e-07!8;UBERON:0000369!8.93e-07!5;UBERON:0002435!8.93e-07!5;UBERON:0000204!8.93e-07!5;UBERON:0010082!8.93e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.06e-21,34;UBERON:0001017,3.44e-16,73;UBERON:0001016,1.08e-15,75;UBERON:0000073,9.08e-15,54;UBERON:0003528,1.09e-14,29;UBERON:0002791,1.09e-14,29;UBERON:0001893,1.09e-14,29;UBERON:0001049,3.37e-13,52;UBERON:0005068,3.37e-13,52;UBERON:0006241,3.37e-13,52;UBERON:0007135,3.37e-13,52;UBERON:0004121,7.45e-12,95;UBERON:0000924,7.45e-12,95;UBERON:0006601,7.45e-12,95;UBERON:0002780,1.50e-10,39;UBERON:0001890,1.50e-10,39;UBERON:0006240,1.50e-10,39;UBERON:0002346,2.44e-10,64;UBERON:0003075,2.44e-10,64;UBERON:0007284,2.44e-10,64;UBERON:0003080,2.99e-10,40;UBERON:0000956,3.12e-10,21;UBERON:0001869,3.12e-10,21;UBERON:0000203,3.12e-10,21;UBERON:0001948,5.38e-09,5;UBERON:0002315,5.38e-09,5;UBERON:0000369,5.73e-09,5;UBERON:0002435,5.73e-09,5;UBERON:0000204,5.73e-09,5;UBERON:0010082,5.73e-09,5;UBERON:0010371,8.26e-09,73;UBERON:0002616,1.01e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0003056,4.25e-08,49;UBERON:0002021,1.28e-07,10;UBERON:0000411,1.28e-07,10;UBERON:0001950,1.28e-07,10;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6;UBERON:0002257,3.89e-07,3;UBERON:0002619,8.99e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.8664130215526,1.08004750665353,0.420649922702764,0.285650984403804,1.54607978666129,0.734944795289724,0.862609239164127,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.05509030184155,1.82975287204819,1.56274011167028,0.558365998002762,0,0.15279824777681,0.294628585473668,1.56608848879013,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.502617408451458,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.35163505977661,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:25294581..25294593,- | |||
|id=chr15:25294581..25294593,- | |||
|ontology_enrichment_celltype=CL:0000117!4.44e-23!23;CL:0000337!4.44e-23!23;CL:0000540!2.76e-18!33;CL:0000047!2.76e-18!33;CL:0000031!2.76e-18!33;CL:0000404!2.76e-18!33;CL:0000393!4.04e-14!39;CL:0000211!4.04e-14!39;CL:0000221!1.30e-13!44;CL:0000133!1.30e-13!44;CL:0002319!4.04e-13!43;CL:0000055!4.30e-10!50;CL:0002609!6.57e-08!6;CL:0002321!1.36e-07!70;CL:0000220!1.36e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-32,23;CL:0000337,1.10e-32,23;CL:0000540,3.37e-22,33;CL:0000047,3.37e-22,33;CL:0000031,3.37e-22,33;CL:0000404,3.37e-22,33;CL:0000393,1.76e-18,39;CL:0000211,1.76e-18,39;CL:0002319,1.42e-16,43;CL:0000221,3.74e-16,44;CL:0000133,3.74e-16,44;CL:0000120,2.39e-15,3;CL:0002613,1.35e-14,3;CL:0002321,3.74e-11,70;CL:0000723,6.00e-08,91;CL:0000048,6.00e-08,91;CL:0002609,1.09e-07,6;CL:0000034,2.58e-07,97;CL:0002612,3.89e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.37e-24!34;UBERON:0002791!6.81e-19!29;UBERON:0003528!6.81e-19!29;UBERON:0001893!6.81e-19!29;UBERON:0001017!1.65e-15!73;UBERON:0005743!1.65e-15!73;UBERON:0000073!9.38e-15!75;UBERON:0001016!9.38e-15!75;UBERON:0001049!2.32e-13!52;UBERON:0005068!2.32e-13!52;UBERON:0006241!2.32e-13!52;UBERON:0007135!2.32e-13!52;UBERON:0000956!3.10e-13!21;UBERON:0001869!3.10e-13!21;UBERON:0000203!3.10e-13!21;UBERON:0002616!3.11e-12!49;UBERON:0004121!3.84e-12!102;UBERON:0000924!3.84e-12!102;UBERON:0006601!3.84e-12!102;UBERON:0002780!5.92e-12!39;UBERON:0001890!5.92e-12!39;UBERON:0006240!5.92e-12!39;UBERON:0002346!5.98e-12!71;UBERON:0003075!5.98e-12!71;UBERON:0007284!5.98e-12!71;UBERON:0000955!8.28e-12!50;UBERON:0006238!8.28e-12!50;UBERON:0003056!1.48e-11!49;UBERON:0000033!1.79e-11!63;UBERON:0003080!1.85e-11!40;UBERON:0002619!3.84e-11!17;UBERON:0007811!3.23e-08!86;UBERON:0002021!4.10e-07!10;UBERON:0000411!4.10e-07!10;UBERON:0001950!4.10e-07!10;UBERON:0002420!6.93e-07!8;UBERON:0007245!6.93e-07!8;UBERON:0010009!6.93e-07!8;UBERON:0010011!6.93e-07!8;UBERON:0000454!6.93e-07!8;UBERON:0000369!8.93e-07!5;UBERON:0002435!8.93e-07!5;UBERON:0000204!8.93e-07!5;UBERON:0010082!8.93e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.06e-21,34;UBERON:0001017,3.44e-16,73;UBERON:0001016,1.08e-15,75;UBERON:0000073,9.08e-15,54;UBERON:0003528,1.09e-14,29;UBERON:0002791,1.09e-14,29;UBERON:0001893,1.09e-14,29;UBERON:0001049,3.37e-13,52;UBERON:0005068,3.37e-13,52;UBERON:0006241,3.37e-13,52;UBERON:0007135,3.37e-13,52;UBERON:0004121,7.45e-12,95;UBERON:0000924,7.45e-12,95;UBERON:0006601,7.45e-12,95;UBERON:0002780,1.50e-10,39;UBERON:0001890,1.50e-10,39;UBERON:0006240,1.50e-10,39;UBERON:0002346,2.44e-10,64;UBERON:0003075,2.44e-10,64;UBERON:0007284,2.44e-10,64;UBERON:0003080,2.99e-10,40;UBERON:0000956,3.12e-10,21;UBERON:0001869,3.12e-10,21;UBERON:0000203,3.12e-10,21;UBERON:0001948,5.38e-09,5;UBERON:0002315,5.38e-09,5;UBERON:0000369,5.73e-09,5;UBERON:0002435,5.73e-09,5;UBERON:0000204,5.73e-09,5;UBERON:0010082,5.73e-09,5;UBERON:0010371,8.26e-09,73;UBERON:0002616,1.01e-08,46;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0003056,4.25e-08,49;UBERON:0002021,1.28e-07,10;UBERON:0000411,1.28e-07,10;UBERON:0001950,1.28e-07,10;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6;UBERON:0002257,3.89e-07,3;UBERON:0002619,8.99e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0,0,1.8664130215526,1.08004750665353,0.420649922702764,0.285650984403804,1.54607978666129,0.734944795289724,0.862609239164127,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.05509030184155,1.82975287204819,1.56274011167028,0.558365998002762,0,0.15279824777681,0.294628585473668,1.56608848879013,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.502617408451458,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.35163505977661,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.453142408984205,1.55328093525546,0.103787347584177,0,0,0,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0,0,0,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr15:25294581..25294593,- | |||
}} |
Revision as of 10:16, 13 September 2013
Short description: | p@chr15:25294581..25294593, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25294581..25294593, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-32 | 23 |
neuron | 3.37e-22 | 33 |
neuronal stem cell | 3.37e-22 | 33 |
neuroblast | 3.37e-22 | 33 |
electrically signaling cell | 3.37e-22 | 33 |
electrically responsive cell | 1.76e-18 | 39 |
electrically active cell | 1.76e-18 | 39 |
neural cell | 1.42e-16 | 43 |
ectodermal cell | 3.74e-16 | 44 |
neurectodermal cell | 3.74e-16 | 44 |
granule cell | 2.39e-15 | 3 |
striatum neuron | 1.35e-14 | 3 |
embryonic cell | 3.74e-11 | 70 |
somatic stem cell | 6.00e-08 | 91 |
multi fate stem cell | 6.00e-08 | 91 |
neuron of cerebral cortex | 1.09e-07 | 6 |
stem cell | 2.58e-07 | 97 |
neuron of the ventral spinal cord | 3.89e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.