FFCP PHASE1:Mm9::chr14:96918286..96918321,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=93688|HGNC=|MCL_coexpression_id=159|UniProt=Q9JI74|association_with_transcript=0bp_to_ENSMUST00000022666_5end|description=CAGE_peak_1_at_Klhl1_5end|id=chr14:96918286..96918321,-|ontology_enrichment_celltype=CL:0000117!3.45e-15!23;CL:0000337!3.45e-15!23;CL:0000540!6.14e-10!33;CL:0000047!6.14e-10!33;CL:0000031!6.14e-10!33;CL:0000404!6.14e-10!33;CL:0000393!3.06e-07!39;CL:0000211!3.06e-07!39;CL:0002319!5.69e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.88e-23,23;CL:0000337,5.88e-23,23;CL:0000540,1.53e-14,33;CL:0000047,1.53e-14,33;CL:0000031,1.53e-14,33;CL:0000404,1.53e-14,33;CL:0000393,1.37e-11,39;CL:0000211,1.37e-11,39;CL:0002319,4.35e-10,43;CL:0000221,9.32e-10,44;CL:0000133,9.32e-10,44;CL:0002614,1.85e-07,3;CL:0000120,3.22e-07,3;CL:0002612,4.43e-07,3;CL:0002610,7.26e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.31e-19!75;UBERON:0001016!2.31e-19!75;UBERON:0001049!7.93e-19!52;UBERON:0005068!7.93e-19!52;UBERON:0006241!7.93e-19!52;UBERON:0007135!7.93e-19!52;UBERON:0001017!8.47e-19!73;UBERON:0005743!8.47e-19!73;UBERON:0000033!2.05e-18!63;UBERON:0002346!6.60e-18!71;UBERON:0003075!6.60e-18!71;UBERON:0007284!6.60e-18!71;UBERON:0000955!4.66e-17!50;UBERON:0006238!4.66e-17!50;UBERON:0002616!2.86e-16!49;UBERON:0003056!7.13e-16!49;UBERON:0004121!1.31e-15!102;UBERON:0000924!1.31e-15!102;UBERON:0006601!1.31e-15!102;UBERON:0002020!1.60e-15!34;UBERON:0003080!2.11e-12!40;UBERON:0002780!1.41e-11!39;UBERON:0001890!1.41e-11!39;UBERON:0006240!1.41e-11!39;UBERON:0002791!3.70e-11!29;UBERON:0003528!3.70e-11!29;UBERON:0001893!3.70e-11!29;UBERON:0007811!1.81e-09!86;UBERON:0002420!1.06e-08!8;UBERON:0007245!1.06e-08!8;UBERON:0010009!1.06e-08!8;UBERON:0010011!1.06e-08!8;UBERON:0000454!1.06e-08!8;UBERON:0000153!5.56e-08!94;UBERON:0003076!1.59e-07!12;UBERON:0003057!1.59e-07!12;UBERON:0002298!2.67e-07!6;UBERON:0002240!4.56e-07!6;UBERON:0005174!4.56e-07!6;UBERON:0001137!4.56e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.93e-20,73;UBERON:0000073,4.34e-20,54;UBERON:0002346,7.36e-20,64;UBERON:0003075,7.36e-20,64;UBERON:0007284,7.36e-20,64;UBERON:0004121,8.37e-20,95;UBERON:0000924,8.37e-20,95;UBERON:0006601,8.37e-20,95;UBERON:0001016,1.71e-19,75;UBERON:0001049,2.70e-17,52;UBERON:0005068,2.70e-17,52;UBERON:0006241,2.70e-17,52;UBERON:0007135,2.70e-17,52;UBERON:0010371,1.92e-16,73;UBERON:0002420,2.73e-15,8;UBERON:0007245,2.73e-15,8;UBERON:0010009,2.73e-15,8;UBERON:0010011,2.73e-15,8;UBERON:0000454,2.73e-15,8;UBERON:0002020,2.06e-14,34;UBERON:0002240,3.71e-12,6;UBERON:0005174,3.71e-12,6;UBERON:0001137,3.71e-12,6;UBERON:0003056,6.80e-12,49;UBERON:0003076,7.08e-12,12;UBERON:0003057,7.08e-12,12;UBERON:0010314,1.85e-11,92;UBERON:0000955,2.55e-11,47;UBERON:0006238,2.55e-11,47;UBERON:0001948,8.57e-11,5;UBERON:0002315,8.57e-11,5;UBERON:0002616,2.59e-10,46;UBERON:0000369,1.86e-09,5;UBERON:0002435,1.86e-09,5;UBERON:0000204,1.86e-09,5;UBERON:0010082,1.86e-09,5;UBERON:0002950,2.20e-09,4;UBERON:0001891,2.20e-09,4;UBERON:0009616,2.20e-09,4;UBERON:0010286,2.20e-09,4;UBERON:0003080,1.52e-08,40;UBERON:0003528,3.60e-08,29;UBERON:0002791,3.60e-08,29;UBERON:0001893,3.60e-08,29;UBERON:0002780,1.60e-07,39;UBERON:0001890,1.60e-07,39;UBERON:0006240,1.60e-07,39;UBERON:0002038,1.85e-07,3;UBERON:0009663,1.85e-07,3;UBERON:0009661,1.85e-07,3;UBERON:0000125,1.85e-07,3;UBERON:0002308,1.85e-07,3;UBERON:0002257,4.43e-07,3;UBERON:0004684,7.26e-07,3;UBERON:0002275,7.26e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,10.5798195854407,6.33831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,5.42736870367227,5.30084498283872,0.979926393719632,0.670918297127655,0,3.30347642998166,5.2351808614927,4.30098293117482,2.90149833006426,4.57438218012048,1.56274011167028,7.2587579740359,11.2552522006336,8.25110537994775,4.71405736757868,9.25415925194169,3.54158947068071,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,7.63932260964596,1.83000241127451,1.88481528169297,0.869121600961382,1.53429274398198,3.74018480207208,2.59586020908412,0,0,0,0,0,1.60931473103431,2.34080768746954,2.26057226753573,1.15662048557257,1.66547836370305,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,3.39913891117389,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,2.57779773515531,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,1.44224540067226,1.92551525755089,0.505394423527595,0.760437899670719,1.13175804831646,0.468207537349412,1.15245274328765,0.746661096422973,0.952587382566147,0.811190281613988,1.35036454324594,1.64834360321323,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.436039249896986,1.31753132581463,0.846146078916765,0.914639864363863,0.263069711437843,1.08643291076689,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.309873682371932,0.192906610981141,0.499621155875892,1.40358965067245,0.214871054048298,0.765153328275374,0.220591419119515,0|short_description=p1@Klhl1}} | ||
|EntrezGene=93688 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q9JI74 | |||
|association_with_transcript=0bp_to_ENSMUST00000022666_5end | |||
|description=CAGE_peak_1_at_Klhl1_5end | |||
|id=chr14:96918286..96918321,- | |||
|ontology_enrichment_celltype=CL:0000117!3.45e-15!23;CL:0000337!3.45e-15!23;CL:0000540!6.14e-10!33;CL:0000047!6.14e-10!33;CL:0000031!6.14e-10!33;CL:0000404!6.14e-10!33;CL:0000393!3.06e-07!39;CL:0000211!3.06e-07!39;CL:0002319!5.69e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.88e-23,23;CL:0000337,5.88e-23,23;CL:0000540,1.53e-14,33;CL:0000047,1.53e-14,33;CL:0000031,1.53e-14,33;CL:0000404,1.53e-14,33;CL:0000393,1.37e-11,39;CL:0000211,1.37e-11,39;CL:0002319,4.35e-10,43;CL:0000221,9.32e-10,44;CL:0000133,9.32e-10,44;CL:0002614,1.85e-07,3;CL:0000120,3.22e-07,3;CL:0002612,4.43e-07,3;CL:0002610,7.26e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.31e-19!75;UBERON:0001016!2.31e-19!75;UBERON:0001049!7.93e-19!52;UBERON:0005068!7.93e-19!52;UBERON:0006241!7.93e-19!52;UBERON:0007135!7.93e-19!52;UBERON:0001017!8.47e-19!73;UBERON:0005743!8.47e-19!73;UBERON:0000033!2.05e-18!63;UBERON:0002346!6.60e-18!71;UBERON:0003075!6.60e-18!71;UBERON:0007284!6.60e-18!71;UBERON:0000955!4.66e-17!50;UBERON:0006238!4.66e-17!50;UBERON:0002616!2.86e-16!49;UBERON:0003056!7.13e-16!49;UBERON:0004121!1.31e-15!102;UBERON:0000924!1.31e-15!102;UBERON:0006601!1.31e-15!102;UBERON:0002020!1.60e-15!34;UBERON:0003080!2.11e-12!40;UBERON:0002780!1.41e-11!39;UBERON:0001890!1.41e-11!39;UBERON:0006240!1.41e-11!39;UBERON:0002791!3.70e-11!29;UBERON:0003528!3.70e-11!29;UBERON:0001893!3.70e-11!29;UBERON:0007811!1.81e-09!86;UBERON:0002420!1.06e-08!8;UBERON:0007245!1.06e-08!8;UBERON:0010009!1.06e-08!8;UBERON:0010011!1.06e-08!8;UBERON:0000454!1.06e-08!8;UBERON:0000153!5.56e-08!94;UBERON:0003076!1.59e-07!12;UBERON:0003057!1.59e-07!12;UBERON:0002298!2.67e-07!6;UBERON:0002240!4.56e-07!6;UBERON:0005174!4.56e-07!6;UBERON:0001137!4.56e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.93e-20,73;UBERON:0000073,4.34e-20,54;UBERON:0002346,7.36e-20,64;UBERON:0003075,7.36e-20,64;UBERON:0007284,7.36e-20,64;UBERON:0004121,8.37e-20,95;UBERON:0000924,8.37e-20,95;UBERON:0006601,8.37e-20,95;UBERON:0001016,1.71e-19,75;UBERON:0001049,2.70e-17,52;UBERON:0005068,2.70e-17,52;UBERON:0006241,2.70e-17,52;UBERON:0007135,2.70e-17,52;UBERON:0010371,1.92e-16,73;UBERON:0002420,2.73e-15,8;UBERON:0007245,2.73e-15,8;UBERON:0010009,2.73e-15,8;UBERON:0010011,2.73e-15,8;UBERON:0000454,2.73e-15,8;UBERON:0002020,2.06e-14,34;UBERON:0002240,3.71e-12,6;UBERON:0005174,3.71e-12,6;UBERON:0001137,3.71e-12,6;UBERON:0003056,6.80e-12,49;UBERON:0003076,7.08e-12,12;UBERON:0003057,7.08e-12,12;UBERON:0010314,1.85e-11,92;UBERON:0000955,2.55e-11,47;UBERON:0006238,2.55e-11,47;UBERON:0001948,8.57e-11,5;UBERON:0002315,8.57e-11,5;UBERON:0002616,2.59e-10,46;UBERON:0000369,1.86e-09,5;UBERON:0002435,1.86e-09,5;UBERON:0000204,1.86e-09,5;UBERON:0010082,1.86e-09,5;UBERON:0002950,2.20e-09,4;UBERON:0001891,2.20e-09,4;UBERON:0009616,2.20e-09,4;UBERON:0010286,2.20e-09,4;UBERON:0003080,1.52e-08,40;UBERON:0003528,3.60e-08,29;UBERON:0002791,3.60e-08,29;UBERON:0001893,3.60e-08,29;UBERON:0002780,1.60e-07,39;UBERON:0001890,1.60e-07,39;UBERON:0006240,1.60e-07,39;UBERON:0002038,1.85e-07,3;UBERON:0009663,1.85e-07,3;UBERON:0009661,1.85e-07,3;UBERON:0000125,1.85e-07,3;UBERON:0002308,1.85e-07,3;UBERON:0002257,4.43e-07,3;UBERON:0004684,7.26e-07,3;UBERON:0002275,7.26e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,10.5798195854407,6.33831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,5.42736870367227,5.30084498283872,0.979926393719632,0.670918297127655,0,3.30347642998166,5.2351808614927,4.30098293117482,2.90149833006426,4.57438218012048,1.56274011167028,7.2587579740359,11.2552522006336,8.25110537994775,4.71405736757868,9.25415925194169,3.54158947068071,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,7.63932260964596,1.83000241127451,1.88481528169297,0.869121600961382,1.53429274398198,3.74018480207208,2.59586020908412,0,0,0,0,0,1.60931473103431,2.34080768746954,2.26057226753573,1.15662048557257,1.66547836370305,0.843315521037559,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,3.39913891117389,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,2.57779773515531,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,1.44224540067226,1.92551525755089,0.505394423527595,0.760437899670719,1.13175804831646,0.468207537349412,1.15245274328765,0.746661096422973,0.952587382566147,0.811190281613988,1.35036454324594,1.64834360321323,0.735994600671987,0.342869252385415,0.532427418478012,1.1921809497366,0.436039249896986,1.31753132581463,0.846146078916765,0.914639864363863,0.263069711437843,1.08643291076689,1.12228454331548,0.474540072496697,0.788035859004508,1.22769312950907,0.309873682371932,0.192906610981141,0.499621155875892,1.40358965067245,0.214871054048298,0.765153328275374,0.220591419119515,0 | |||
|short_description=p1@Klhl1 | |||
}} |
Revision as of 03:16, 13 September 2013
Short description: | p1@Klhl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klhl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000022666_5end |
EntrezGene: | Klhl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.88e-23 | 23 |
neuroblast (sensu Vertebrata) | 5.88e-23 | 23 |
neuron | 1.53e-14 | 33 |
neuronal stem cell | 1.53e-14 | 33 |
neuroblast | 1.53e-14 | 33 |
electrically signaling cell | 1.53e-14 | 33 |
electrically responsive cell | 1.37e-11 | 39 |
electrically active cell | 1.37e-11 | 39 |
neural cell | 4.35e-10 | 43 |
ectodermal cell | 9.32e-10 | 44 |
neurectodermal cell | 9.32e-10 | 44 |
neuron of the substantia nigra | 1.85e-07 | 3 |
granule cell | 3.22e-07 | 3 |
neuron of the ventral spinal cord | 4.43e-07 | 3 |
raphe nuclei neuron | 7.26e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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