FFCP PHASE1:Mm9::chr14:80406074..80406083,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:80406074..80406083,+|id=chr14:80406074..80406083,+|ontology_enrichment_celltype=CL:0002250!5.27e-09!3;CL:0002076!2.07e-07!15;CL:0002563!2.89e-07!9;CL:0002251!2.89e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,7.38e-28,3;CL:0002563,1.89e-16,9;CL:0002251,1.89e-16,9;CL:0002076,5.18e-10,15;CL:0000066,4.25e-09,25;CL:0000223,1.41e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.83e-16!15;UBERON:0005409!8.57e-15!59;UBERON:0000160!2.23e-14!43;UBERON:0004923!5.05e-13!24;UBERON:0001242!7.19e-12!13;UBERON:0000060!7.19e-12!13;UBERON:0001262!7.19e-12!13;UBERON:0004786!7.19e-12!13;UBERON:0001007!1.55e-08!128;UBERON:0001555!1.55e-08!128;UBERON:0007026!1.55e-08!128;UBERON:0000331!2.20e-08!3;UBERON:0002116!2.20e-08!3;UBERON:0001204!2.20e-08!3;UBERON:0001168!2.20e-08!3;UBERON:0004119!2.62e-08!130;UBERON:0000925!2.62e-08!130;UBERON:0006595!2.62e-08!130;UBERON:0003350!2.89e-07!9;UBERON:0004808!2.89e-07!9;UBERON:0001277!2.89e-07!9;UBERON:0004921!5.50e-07!126;UBERON:0004185!5.50e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-28,15;UBERON:0001242,1.59e-24,13;UBERON:0001262,1.59e-24,13;UBERON:0004786,1.59e-24,13;UBERON:0004923,7.87e-18,24;UBERON:0003350,1.89e-16,9;UBERON:0004808,1.89e-16,9;UBERON:0001277,1.89e-16,9;UBERON:0000485,1.57e-13,11;UBERON:0000331,1.86e-12,3;UBERON:0002116,1.86e-12,3;UBERON:0001204,1.86e-12,3;UBERON:0001168,1.86e-12,3;UBERON:0000160,2.97e-10,31;UBERON:0002108,1.40e-09,4|phase1_expression=0,0,0,0,0,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,0.91763712426868,0,0.430761996159075,1.50829862880122,1.52018735565099,1.00812051903972,0.665191531965914,0,0,0,6.35473563452804,8.47796691328311,6.32925004413344,0,0,0,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:80406074..80406083,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:80406074..80406083,+ | |||
|id=chr14:80406074..80406083,+ | |||
|ontology_enrichment_celltype=CL:0002250!5.27e-09!3;CL:0002076!2.07e-07!15;CL:0002563!2.89e-07!9;CL:0002251!2.89e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,7.38e-28,3;CL:0002563,1.89e-16,9;CL:0002251,1.89e-16,9;CL:0002076,5.18e-10,15;CL:0000066,4.25e-09,25;CL:0000223,1.41e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.83e-16!15;UBERON:0005409!8.57e-15!59;UBERON:0000160!2.23e-14!43;UBERON:0004923!5.05e-13!24;UBERON:0001242!7.19e-12!13;UBERON:0000060!7.19e-12!13;UBERON:0001262!7.19e-12!13;UBERON:0004786!7.19e-12!13;UBERON:0001007!1.55e-08!128;UBERON:0001555!1.55e-08!128;UBERON:0007026!1.55e-08!128;UBERON:0000331!2.20e-08!3;UBERON:0002116!2.20e-08!3;UBERON:0001204!2.20e-08!3;UBERON:0001168!2.20e-08!3;UBERON:0004119!2.62e-08!130;UBERON:0000925!2.62e-08!130;UBERON:0006595!2.62e-08!130;UBERON:0003350!2.89e-07!9;UBERON:0004808!2.89e-07!9;UBERON:0001277!2.89e-07!9;UBERON:0004921!5.50e-07!126;UBERON:0004185!5.50e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-28,15;UBERON:0001242,1.59e-24,13;UBERON:0001262,1.59e-24,13;UBERON:0004786,1.59e-24,13;UBERON:0004923,7.87e-18,24;UBERON:0003350,1.89e-16,9;UBERON:0004808,1.89e-16,9;UBERON:0001277,1.89e-16,9;UBERON:0000485,1.57e-13,11;UBERON:0000331,1.86e-12,3;UBERON:0002116,1.86e-12,3;UBERON:0001204,1.86e-12,3;UBERON:0001168,1.86e-12,3;UBERON:0000160,2.97e-10,31;UBERON:0002108,1.40e-09,4 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,0.91763712426868,0,0.430761996159075,1.50829862880122,1.52018735565099,1.00812051903972,0.665191531965914,0,0,0,6.35473563452804,8.47796691328311,6.32925004413344,0,0,0,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80406074..80406083,+ | |||
}} |
Revision as of 03:11, 13 September 2013
Short description: | p@chr14:80406074..80406083, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:80406074..80406083, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 7.38e-28 | 3 |
intestinal epithelial cell | 1.89e-16 | 9 |
epithelial cell of alimentary canal | 1.89e-16 | 9 |
endo-epithelial cell | 5.18e-10 | 15 |
epithelial cell | 4.25e-09 | 25 |
endodermal cell | 1.41e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.33e-28 | 15 |
intestinal mucosa | 1.59e-24 | 13 |
wall of intestine | 1.59e-24 | 13 |
gastrointestinal system mucosa | 1.59e-24 | 13 |
organ component layer | 7.87e-18 | 24 |
epithelium of mucosa | 1.89e-16 | 9 |
gastrointestinal system epithelium | 1.89e-16 | 9 |
intestinal epithelium | 1.89e-16 | 9 |
simple columnar epithelium | 1.57e-13 | 11 |
ileal mucosa | 1.86e-12 | 3 |
ileum | 1.86e-12 | 3 |
mucosa of small intestine | 1.86e-12 | 3 |
wall of small intestine | 1.86e-12 | 3 |
intestine | 2.97e-10 | 31 |
small intestine | 1.40e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.