FFCP PHASE1:Hg19::chr4:15939963..15939978,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19695|TSSclassifier=S|UniProt=Q14512|association_with_transcript=0bp_to_ENST00000259988,uc003gom.2_5end|coexpression_cluster_id=C4385|description=CAGE_peak_1_at_FGFBP1_5end|id=chr4:15939963..15939978,-|ontology_enrichment_celltype=CL:0000066!7.91e-44!254;CL:0002076!1.06e-26!43;CL:0000223!3.50e-18!59;CL:0002251!3.63e-13!21;CL:0002368!2.62e-10!13;CL:0000076!2.62e-09!62;CL:0002159!1.01e-07!13;CL:0002202!2.90e-07!9;CL:0002632!2.90e-07!9;CL:0000082!8.87e-07!19|ontology_enrichment_celltype_v019=CL:0002076;2.03e-25;42!CL:0002251;1.54e-16;20!CL:0002368;4.85e-14;13!CL:0002159;7.59e-10;14!CL:0002202;8.70e-10;9!CL:0002632;8.70e-10;9!CL:0000622;5.00e-07;5|ontology_enrichment_celltype_v019_2=CL:0000066,7.15e-43,253;CL:0002076,6.75e-36,42;CL:0000223,4.23e-25,58;CL:0002251,1.68e-16,20;CL:0002368,4.79e-14,13;CL:0002159,7.60e-10,14;CL:0002202,8.60e-10,9;CL:0002632,8.60e-10,9;CL:0000076,2.65e-09,63;CL:0000622,5.44e-07,5|ontology_enrichment_development_v019=CL:0000223;1.77e-13;58!UBERON:0008947;3.30e-11;29!UBERON:0006595;8.20e-08;86|ontology_enrichment_disease=DOID:305!5.41e-23!106;DOID:0050687!9.02e-14!143;DOID:1749!9.71e-11!14;DOID:299!8.67e-09!25;DOID:162!3.49e-08!235;DOID:14566!7.25e-08!239|ontology_enrichment_disease_v019=DOID:1749;1.15e-14;14!DOID:299;9.76e-08;25|ontology_enrichment_disease_v019_2=DOID:305,2.09e-23,106;DOID:1749,1.21e-14,14;DOID:0050687,2.57e-14,143;DOID:299,8.87e-08,25;DOID:162,3.31e-07,235;DOID:14566,9.80e-07,239|ontology_enrichment_uberon=UBERON:0004119!1.69e-27!169;UBERON:0000925!1.69e-27!169;UBERON:0006595!1.69e-27!169;UBERON:0001004!4.42e-23!72;UBERON:0001007!8.41e-21!155;UBERON:0001555!8.41e-21!155;UBERON:0007026!8.41e-21!155;UBERON:0000065!3.07e-19!53;UBERON:0000077!1.53e-17!130;UBERON:0008947!1.49e-16!38;UBERON:0003258!1.49e-16!38;UBERON:0004921!2.37e-16!129;UBERON:0004185!2.37e-16!129;UBERON:0000072!2.28e-15!46;UBERON:0005911!9.03e-13!82;UBERON:0001041!2.01e-12!98;UBERON:0000464!5.14e-12!104;UBERON:0005153!6.23e-11!37;UBERON:0000063!4.74e-10!97;UBERON:0005178!5.60e-10!34;UBERON:0002224!5.60e-10!34;UBERON:0000161!5.96e-10!35;UBERON:0000064!1.39e-09!219;UBERON:0000466!1.63e-09!126;UBERON:0005181!1.87e-09!35;UBERON:0000062!1.08e-08!511;UBERON:0000344!1.30e-08!12;UBERON:0001737!1.49e-08!9;UBERON:0001557!3.15e-08!19;UBERON:0006554!4.93e-08!44;UBERON:0005157!5.80e-08!51;UBERON:0000166!6.54e-08!21;UBERON:0002048!8.03e-08!22;UBERON:0000117!8.03e-08!22;UBERON:0000171!8.03e-08!22;UBERON:0000170!8.03e-08!22;UBERON:0005597!8.03e-08!22;UBERON:0000118!8.03e-08!22;UBERON:0003100!8.69e-08!41;UBERON:0001048!9.08e-08!168;UBERON:0003104!1.11e-07!238;UBERON:0009142!1.11e-07!238;UBERON:0001008!1.15e-07!45;UBERON:0005156!1.52e-07!59;UBERON:0000990!1.52e-07!59;UBERON:0004807!2.28e-07!28;UBERON:0005795!2.35e-07!22;UBERON:0004802!8.87e-07!19;UBERON:0000115!8.87e-07!19;UBERON:0000995!9.53e-07!21|ontology_enrichment_uberon_v019=UBERON:0000065;4.60e-14;44!UBERON:0000072;8.86e-14;37!UBERON:0001004;1.71e-12;65!UBERON:0001737;2.45e-11;9!UBERON:0001557;2.45e-11;9!UBERON:0005911;1.04e-09;36!UBERON:0000161;1.41e-09;19!UBERON:0000166;1.41e-09;19!UBERON:0000344;1.82e-09;20!UBERON:0000165;6.07e-09;28!UBERON:0004807;8.66e-09;22!UBERON:0005178;1.50e-08;34!UBERON:0002224;1.50e-08;34!UBERON:0000486;1.59e-08;12!UBERON:0000974;3.62e-08;6!UBERON:0005181;3.82e-08;35!UBERON:0005910;4.51e-08;6!UBERON:0007196;6.48e-08;15!UBERON:0001558;6.48e-08;15!UBERON:0000365;2.22e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.44e-30,160;UBERON:0000925,5.44e-30,160;UBERON:0006595,5.44e-30,160;UBERON:0001004,2.48e-24,74;UBERON:0001007,2.23e-22,145;UBERON:0001555,2.23e-22,145;UBERON:0007026,2.23e-22,145;UBERON:0000065,2.63e-19,54;UBERON:0004921,4.92e-19,118;UBERON:0008947,6.91e-17,38;UBERON:0003258,6.91e-17,38;UBERON:0000072,3.55e-16,47;UBERON:0001041,4.06e-15,87;UBERON:0000161,2.31e-13,36;UBERON:0001737,2.46e-11,9;UBERON:0000166,8.72e-11,22;UBERON:0005911,1.83e-10,82;UBERON:0005153,9.73e-10,37;UBERON:0001557,1.71e-09,19;UBERON:0000344,1.84e-09,20;UBERON:0005178,2.23e-09,34;UBERON:0002224,2.23e-09,34;UBERON:0003102,4.17e-09,99;UBERON:0005181,5.91e-09,35;UBERON:0000165,1.82e-08,29;UBERON:0000930,1.82e-08,29;UBERON:0005157,1.84e-08,47;UBERON:0005910,4.34e-08,6;UBERON:0007196,6.49e-08,15;UBERON:0001558,6.49e-08,15;UBERON:0006554,1.25e-07,47;UBERON:0000365,2.20e-07,5;UBERON:0001008,2.39e-07,48;UBERON:0003100,4.96e-07,41|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,2.08948502559871,1.47440361900905,2.79120467188971,0.873765488520689,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,1314.77235100487,1016.56997587659,176.002908839391,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19695 | |||
|TSSclassifier=S | |||
|UniProt=Q14512 | |||
|association_with_transcript=0bp_to_ENST00000259988,uc003gom.2_5end | |||
|coexpression_cluster_id=C4385 | |||
|description=CAGE_peak_1_at_FGFBP1_5end | |||
|id=chr4:15939963..15939978,- | |||
|ontology_enrichment_celltype=CL:0000066!7.91e-44!254;CL:0002076!1.06e-26!43;CL:0000223!3.50e-18!59;CL:0002251!3.63e-13!21;CL:0002368!2.62e-10!13;CL:0000076!2.62e-09!62;CL:0002159!1.01e-07!13;CL:0002202!2.90e-07!9;CL:0002632!2.90e-07!9;CL:0000082!8.87e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.03e-25;42!CL:0002251;1.54e-16;20!CL:0002368;4.85e-14;13!CL:0002159;7.59e-10;14!CL:0002202;8.70e-10;9!CL:0002632;8.70e-10;9!CL:0000622;5.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.15e-43,253;CL:0002076,6.75e-36,42;CL:0000223,4.23e-25,58;CL:0002251,1.68e-16,20;CL:0002368,4.79e-14,13;CL:0002159,7.60e-10,14;CL:0002202,8.60e-10,9;CL:0002632,8.60e-10,9;CL:0000076,2.65e-09,63;CL:0000622,5.44e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.77e-13;58!UBERON:0008947;3.30e-11;29!UBERON:0006595;8.20e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.41e-23!106;DOID:0050687!9.02e-14!143;DOID:1749!9.71e-11!14;DOID:299!8.67e-09!25;DOID:162!3.49e-08!235;DOID:14566!7.25e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.15e-14;14!DOID:299;9.76e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.09e-23,106;DOID:1749,1.21e-14,14;DOID:0050687,2.57e-14,143;DOID:299,8.87e-08,25;DOID:162,3.31e-07,235;DOID:14566,9.80e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.69e-27!169;UBERON:0000925!1.69e-27!169;UBERON:0006595!1.69e-27!169;UBERON:0001004!4.42e-23!72;UBERON:0001007!8.41e-21!155;UBERON:0001555!8.41e-21!155;UBERON:0007026!8.41e-21!155;UBERON:0000065!3.07e-19!53;UBERON:0000077!1.53e-17!130;UBERON:0008947!1.49e-16!38;UBERON:0003258!1.49e-16!38;UBERON:0004921!2.37e-16!129;UBERON:0004185!2.37e-16!129;UBERON:0000072!2.28e-15!46;UBERON:0005911!9.03e-13!82;UBERON:0001041!2.01e-12!98;UBERON:0000464!5.14e-12!104;UBERON:0005153!6.23e-11!37;UBERON:0000063!4.74e-10!97;UBERON:0005178!5.60e-10!34;UBERON:0002224!5.60e-10!34;UBERON:0000161!5.96e-10!35;UBERON:0000064!1.39e-09!219;UBERON:0000466!1.63e-09!126;UBERON:0005181!1.87e-09!35;UBERON:0000062!1.08e-08!511;UBERON:0000344!1.30e-08!12;UBERON:0001737!1.49e-08!9;UBERON:0001557!3.15e-08!19;UBERON:0006554!4.93e-08!44;UBERON:0005157!5.80e-08!51;UBERON:0000166!6.54e-08!21;UBERON:0002048!8.03e-08!22;UBERON:0000117!8.03e-08!22;UBERON:0000171!8.03e-08!22;UBERON:0000170!8.03e-08!22;UBERON:0005597!8.03e-08!22;UBERON:0000118!8.03e-08!22;UBERON:0003100!8.69e-08!41;UBERON:0001048!9.08e-08!168;UBERON:0003104!1.11e-07!238;UBERON:0009142!1.11e-07!238;UBERON:0001008!1.15e-07!45;UBERON:0005156!1.52e-07!59;UBERON:0000990!1.52e-07!59;UBERON:0004807!2.28e-07!28;UBERON:0005795!2.35e-07!22;UBERON:0004802!8.87e-07!19;UBERON:0000115!8.87e-07!19;UBERON:0000995!9.53e-07!21 | |||
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| |||
|short_description=p1@FGFBP1 | |||
}} |
Revision as of 03:04, 13 September 2013
Short description: | p1@FGFBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FGFBP1_5end |
Coexpression cluster: | C4385_Keratinocyte_Tracheal_Bronchial_Mallassezderived_Gingival_Sebocyte_oral |
Association with transcript: | 0bp_to_ENST00000259988, uc003gom.2_5end |
EntrezGene: | FGFBP1 |
HGNC: | 19695 |
UniProt: | Q14512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.15e-43 | 253 |
endo-epithelial cell | 6.75e-36 | 42 |
endodermal cell | 4.23e-25 | 58 |
epithelial cell of alimentary canal | 1.68e-16 | 20 |
respiratory epithelial cell | 4.79e-14 | 13 |
general ecto-epithelial cell | 7.60e-10 | 14 |
epithelial cell of tracheobronchial tree | 8.60e-10 | 9 |
epithelial cell of lower respiratory tract | 8.60e-10 | 9 |
squamous epithelial cell | 2.65e-09 | 63 |
acinar cell | 5.44e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.44e-30 | 160 |
endoderm | 5.44e-30 | 160 |
presumptive endoderm | 5.44e-30 | 160 |
respiratory system | 2.48e-24 | 74 |
digestive system | 2.23e-22 | 145 |
digestive tract | 2.23e-22 | 145 |
primitive gut | 2.23e-22 | 145 |
respiratory tract | 2.63e-19 | 54 |
subdivision of digestive tract | 4.92e-19 | 118 |
respiratory primordium | 6.91e-17 | 38 |
endoderm of foregut | 6.91e-17 | 38 |
segment of respiratory tract | 3.55e-16 | 47 |
foregut | 4.06e-15 | 87 |
orifice | 2.31e-13 | 36 |
larynx | 2.46e-11 | 9 |
oral opening | 8.72e-11 | 22 |
endo-epithelium | 1.83e-10 | 82 |
epithelial bud | 9.73e-10 | 37 |
upper respiratory tract | 1.71e-09 | 19 |
mucosa | 1.84e-09 | 20 |
thoracic cavity element | 2.23e-09 | 34 |
thoracic cavity | 2.23e-09 | 34 |
surface structure | 4.17e-09 | 99 |
thoracic segment organ | 5.91e-09 | 35 |
mouth | 1.82e-08 | 29 |
stomodeum | 1.82e-08 | 29 |
epithelial fold | 1.84e-08 | 47 |
transitional epithelium | 4.34e-08 | 6 |
tracheobronchial tree | 6.49e-08 | 15 |
lower respiratory tract | 6.49e-08 | 15 |
urinary system structure | 1.25e-07 | 47 |
urothelium | 2.20e-07 | 5 |
renal system | 2.39e-07 | 48 |
female organism | 4.96e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.09e-23 | 106 |
squamous cell carcinoma | 1.21e-14 | 14 |
cell type cancer | 2.57e-14 | 143 |
adenocarcinoma | 8.87e-08 | 25 |
cancer | 3.31e-07 | 235 |
disease of cellular proliferation | 9.80e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.