FFCP PHASE1:Hg19::chr4:159046557..159046560,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:159046557..159046560,-|id=chr4:159046557..159046560,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;3.00e-14;6!CL:0002504;6.16e-13;3!CL:1000279;6.16e-13;3!CL:1000280;6.16e-13;3!CL:0002618;6.16e-13;3!CL:0000228;2.50e-10;1!CL:0002372;2.50e-10;1!CL:0002543;6.67e-07;6|ontology_enrichment_celltype_v019_2=CL:0000235,2.74e-14,6;CL:0002504,6.56e-13,3;CL:1000279,6.56e-13,3;CL:1000280,6.56e-13,3;CL:0002618,9.42e-13,3;CL:0000228,2.28e-10,1;CL:0002372,2.28e-10,1;CL:0002543,8.22e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!9.78e-09!659;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.52e-07!626;UBERON:0007023!2.37e-07!115|ontology_enrichment_uberon_v019=UBERON:0002134;6.72e-11;1!UBERON:0005208;6.72e-11;1!UBERON:0004145;6.72e-11;1!UBERON:0005946;6.72e-11;1!UBERON:0005965;6.72e-11;1!UBERON:0002078;6.72e-11;1!UBERON:0005795;2.50e-10;1!UBERON:0002066;4.06e-08;5!UBERON:0000059;5.20e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.73e-11,1;UBERON:0005208,6.73e-11,1;UBERON:0005946,6.73e-11,1;UBERON:0005965,6.73e-11,1;UBERON:0002078,6.73e-11,1;UBERON:0000059,5.09e-08,11;UBERON:0002066,5.22e-08,5|phase1_expression=0.54503513781167,0.428201047781966,0.986680828671798,0,2.68176656656373,0,0,0,0.783556884599516,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.671746422719773,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0.600707571366025,0.964353520182481,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,1.07159673940896,1.34717623575702,0.563057402416611,0,0,0.549605231791222,0,0,0.436094052142534,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0.570762456703795,0,0,1.96973604869918,1.17002132569619,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.904318131178758,0,0.099972991182057,0,0,2.10833939483032,0,0,1.42636905040718,0.579125226670317,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.581051892299796,0,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,1.61885211824983,1.09814811894422,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.573645408816206,0.589494246078727,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0.3945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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:159046557..159046560,- | |||
|id=chr4:159046557..159046560,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.00e-14;6!CL:0002504;6.16e-13;3!CL:1000279;6.16e-13;3!CL:1000280;6.16e-13;3!CL:0002618;6.16e-13;3!CL:0000228;2.50e-10;1!CL:0002372;2.50e-10;1!CL:0002543;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.74e-14,6;CL:0002504,6.56e-13,3;CL:1000279,6.56e-13,3;CL:1000280,6.56e-13,3;CL:0002618,9.42e-13,3;CL:0000228,2.28e-10,1;CL:0002372,2.28e-10,1;CL:0002543,8.22e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.78e-09!659;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.52e-07!626;UBERON:0007023!2.37e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.72e-11;1!UBERON:0005208;6.72e-11;1!UBERON:0004145;6.72e-11;1!UBERON:0005946;6.72e-11;1!UBERON:0005965;6.72e-11;1!UBERON:0002078;6.72e-11;1!UBERON:0005795;2.50e-10;1!UBERON:0002066;4.06e-08;5!UBERON:0000059;5.20e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.73e-11,1;UBERON:0005208,6.73e-11,1;UBERON:0005946,6.73e-11,1;UBERON:0005965,6.73e-11,1;UBERON:0002078,6.73e-11,1;UBERON:0000059,5.09e-08,11;UBERON:0002066,5.22e-08,5 | |||
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| |||
|short_description=p@chr4:159046557..159046560,- | |||
}} |
Revision as of 03:01, 13 September 2013
Short description: | p@chr4:159046557..159046560, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:159046557..159046560, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.74e-14 | 6 |
enteric smooth muscle cell | 6.56e-13 | 3 |
smooth muscle cell of large intestine | 6.56e-13 | 3 |
smooth muscle cell of colon | 6.56e-13 | 3 |
endothelial cell of umbilical vein | 9.42e-13 | 3 |
multinucleate cell | 2.28e-10 | 1 |
myotube | 2.28e-10 | 1 |
vein endothelial cell | 8.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 6.73e-11 | 1 |
right atrium valve | 6.73e-11 | 1 |
outflow tract of atrium | 6.73e-11 | 1 |
outflow part of right atrium | 6.73e-11 | 1 |
right cardiac atrium | 6.73e-11 | 1 |
large intestine | 5.09e-08 | 11 |
umbilical vein | 5.22e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.