FFCP PHASE1:Hg19::chr4:155533359..155533365,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=3694|TSSclassifier=S|UniProt=P02679|association_with_transcript=-105bp_to_X51473_5end|coexpression_cluster_id=C5|description=CAGE_peak_13_at_FGG_5end|id=chr4:155533359..155533365,-|ontology_enrichment_celltype=CL:0000181!9.18e-30!12;CL:0000417!9.18e-30!12;CL:0000668!9.18e-30!12;CL:0000414!9.18e-30!12;CL:0000412!9.18e-30!12;CL:0000182!9.18e-30!12;CL:0000223!1.60e-09!59;CL:0002563!9.63e-07!4|ontology_enrichment_celltype_v019=CL:0000182;2.22e-30;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0000223,6.02e-07,58|ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13!CL:0000223;6.52e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.10e-41!19;UBERON:0006925!1.10e-41!19;UBERON:0008836!1.10e-41!19;UBERON:0008835!4.88e-36!22;UBERON:0003894!4.88e-36!22;UBERON:0009854!1.75e-34!23;UBERON:0007499!9.64e-32!25;UBERON:0009497!9.64e-32!25;UBERON:0000015!9.64e-32!25;UBERON:0002423!9.64e-32!25;UBERON:0006235!9.64e-32!25;UBERON:0004161!9.64e-32!25;UBERON:0005057!1.57e-30!26;UBERON:0009856!1.57e-30!26;UBERON:0002365!1.23e-25!31;UBERON:0002330!1.23e-25!31;UBERON:0002368!9.99e-23!35;UBERON:0003929!6.87e-20!54;UBERON:0000949!1.05e-17!45;UBERON:0005172!1.69e-14!55;UBERON:0005173!1.69e-14!55;UBERON:0002530!1.62e-13!59;UBERON:0005911!4.47e-13!82;UBERON:0002417!4.48e-13!61;UBERON:0000916!4.48e-13!61;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0001041!3.99e-08!98;UBERON:0000490!1.07e-07!138;UBERON:0005177!1.96e-07!107;UBERON:0009569!4.94e-07!113;UBERON:0002405!7.57e-07!115;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155;UBERON:0001242!9.63e-07!4;UBERON:0001262!9.63e-07!4;UBERON:0004786!9.63e-07!4;UBERON:0004808!9.63e-07!4;UBERON:0001277!9.63e-07!4;UBERON:0003914!9.94e-07!118|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;2.96e-32;31!UBERON:0002330;2.96e-32;31!UBERON:0002368;7.58e-28;33!UBERON:0000949;4.39e-20;43!UBERON:0005172;2.19e-14;52!UBERON:0005173;2.19e-14;52!UBERON:0002417;4.84e-11;58!UBERON:0000916;4.84e-11;58!UBERON:0002530;2.08e-10;57!UBERON:0001007;3.14e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,7.86261773342101,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39656701034247,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@FGG}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3694 | |||
|TSSclassifier=S | |||
|UniProt=P02679 | |||
|association_with_transcript=-105bp_to_X51473_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_FGG_5end | |||
|id=chr4:155533359..155533365,- | |||
|ontology_enrichment_celltype=CL:0000181!9.18e-30!12;CL:0000417!9.18e-30!12;CL:0000668!9.18e-30!12;CL:0000414!9.18e-30!12;CL:0000412!9.18e-30!12;CL:0000182!9.18e-30!12;CL:0000223!1.60e-09!59;CL:0002563!9.63e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.22e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13!CL:0000223;6.52e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.10e-41!19;UBERON:0006925!1.10e-41!19;UBERON:0008836!1.10e-41!19;UBERON:0008835!4.88e-36!22;UBERON:0003894!4.88e-36!22;UBERON:0009854!1.75e-34!23;UBERON:0007499!9.64e-32!25;UBERON:0009497!9.64e-32!25;UBERON:0000015!9.64e-32!25;UBERON:0002423!9.64e-32!25;UBERON:0006235!9.64e-32!25;UBERON:0004161!9.64e-32!25;UBERON:0005057!1.57e-30!26;UBERON:0009856!1.57e-30!26;UBERON:0002365!1.23e-25!31;UBERON:0002330!1.23e-25!31;UBERON:0002368!9.99e-23!35;UBERON:0003929!6.87e-20!54;UBERON:0000949!1.05e-17!45;UBERON:0005172!1.69e-14!55;UBERON:0005173!1.69e-14!55;UBERON:0002530!1.62e-13!59;UBERON:0005911!4.47e-13!82;UBERON:0002417!4.48e-13!61;UBERON:0000916!4.48e-13!61;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0001041!3.99e-08!98;UBERON:0000490!1.07e-07!138;UBERON:0005177!1.96e-07!107;UBERON:0009569!4.94e-07!113;UBERON:0002405!7.57e-07!115;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155;UBERON:0001242!9.63e-07!4;UBERON:0001262!9.63e-07!4;UBERON:0004786!9.63e-07!4;UBERON:0004808!9.63e-07!4;UBERON:0001277!9.63e-07!4;UBERON:0003914!9.94e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;2.96e-32;31!UBERON:0002330;2.96e-32;31!UBERON:0002368;7.58e-28;33!UBERON:0000949;4.39e-20;43!UBERON:0005172;2.19e-14;52!UBERON:0005173;2.19e-14;52!UBERON:0002417;4.84e-11;58!UBERON:0000916;4.84e-11;58!UBERON:0002530;2.08e-10;57!UBERON:0001007;3.14e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,7.86261773342101,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39656701034247,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@FGG | |||
}} |
Revision as of 02:56, 13 September 2013
Short description: | p13@FGG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_FGG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -105bp_to_X51473_5end |
EntrezGene: | FGG |
HGNC: | 3694 |
UniProt: | P02679 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-30 | 12 |
endodermal cell | 6.02e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.