FFCP PHASE1:Mm9::chr14:63668728..63668738,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73670|HGNC=|MCL_coexpression_id=9|UniProt=D3YYK2|association_with_transcript=53bp_to_ENSMUST00000111209_5end|description=CAGE_peak_3_at_Defb30_5end|id=chr14:63668728..63668738,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000080!7.42e-18!4;UBERON:0005904!7.42e-18!4;UBERON:0006947!7.42e-18!4;UBERON:0002120!7.42e-18!4;UBERON:0004054!7.42e-18!4;UBERON:0004875!7.42e-18!4;UBERON:0004876!7.42e-18!4;UBERON:0005721!7.42e-18!4;UBERON:0005754!7.42e-18!4;UBERON:0007297!7.42e-18!4;UBERON:0004175!9.53e-14!9;UBERON:0003135!1.07e-12!15;UBERON:0000058!4.10e-12!6;UBERON:0003101!6.64e-12!16;UBERON:0000079!6.64e-12!16;UBERON:0001301!2.91e-11!3;UBERON:0006555!2.91e-11!3;UBERON:0005103!2.91e-11!3;UBERON:0000083!2.91e-11!3;UBERON:0009201!2.91e-11!3;UBERON:0004819!2.91e-11!3;UBERON:0006553!2.91e-11!3;UBERON:0003074!2.91e-11!3;UBERON:0003060!2.91e-11!3;UBERON:0003133!4.25e-11!24;UBERON:0005156!3.17e-10!26;UBERON:0000990!3.17e-10!26;UBERON:0000473!6.21e-09!14;UBERON:0003064!6.21e-09!14;UBERON:0000998!7.41e-09!1;UBERON:0007194!7.41e-09!1;UBERON:0006868!7.41e-09!1;UBERON:0000996!1.47e-08!1;UBERON:0003887!1.75e-07!10;UBERON:0004176!2.15e-07!17;UBERON:0001008!2.15e-07!17;UBERON:0009196!2.15e-07!17;UBERON:0009117!2.15e-07!17;UBERON:0000991!5.40e-07!18;UBERON:0005564!5.40e-07!18;UBERON:0004122!6.78e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.61e-30,3;UBERON:0006555,5.61e-30,3;UBERON:0005103,5.61e-30,3;UBERON:0000083,5.61e-30,3;UBERON:0009201,5.61e-30,3;UBERON:0004819,5.61e-30,3;UBERON:0006553,5.61e-30,3;UBERON:0003074,5.61e-30,3;UBERON:0003060,5.61e-30,3;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,17.9433158487909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Defb30}} | ||
|EntrezGene=73670 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=D3YYK2 | |||
|association_with_transcript=53bp_to_ENSMUST00000111209_5end | |||
|description=CAGE_peak_3_at_Defb30_5end | |||
|id=chr14:63668728..63668738,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!7.42e-18!4;UBERON:0005904!7.42e-18!4;UBERON:0006947!7.42e-18!4;UBERON:0002120!7.42e-18!4;UBERON:0004054!7.42e-18!4;UBERON:0004875!7.42e-18!4;UBERON:0004876!7.42e-18!4;UBERON:0005721!7.42e-18!4;UBERON:0005754!7.42e-18!4;UBERON:0007297!7.42e-18!4;UBERON:0004175!9.53e-14!9;UBERON:0003135!1.07e-12!15;UBERON:0000058!4.10e-12!6;UBERON:0003101!6.64e-12!16;UBERON:0000079!6.64e-12!16;UBERON:0001301!2.91e-11!3;UBERON:0006555!2.91e-11!3;UBERON:0005103!2.91e-11!3;UBERON:0000083!2.91e-11!3;UBERON:0009201!2.91e-11!3;UBERON:0004819!2.91e-11!3;UBERON:0006553!2.91e-11!3;UBERON:0003074!2.91e-11!3;UBERON:0003060!2.91e-11!3;UBERON:0003133!4.25e-11!24;UBERON:0005156!3.17e-10!26;UBERON:0000990!3.17e-10!26;UBERON:0000473!6.21e-09!14;UBERON:0003064!6.21e-09!14;UBERON:0000998!7.41e-09!1;UBERON:0007194!7.41e-09!1;UBERON:0006868!7.41e-09!1;UBERON:0000996!1.47e-08!1;UBERON:0003887!1.75e-07!10;UBERON:0004176!2.15e-07!17;UBERON:0001008!2.15e-07!17;UBERON:0009196!2.15e-07!17;UBERON:0009117!2.15e-07!17;UBERON:0000991!5.40e-07!18;UBERON:0005564!5.40e-07!18;UBERON:0004122!6.78e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.61e-30,3;UBERON:0006555,5.61e-30,3;UBERON:0005103,5.61e-30,3;UBERON:0000083,5.61e-30,3;UBERON:0009201,5.61e-30,3;UBERON:0004819,5.61e-30,3;UBERON:0006553,5.61e-30,3;UBERON:0003074,5.61e-30,3;UBERON:0003060,5.61e-30,3;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,17.9433158487909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Defb30 | |||
}} |
Revision as of 02:43, 13 September 2013
Short description: | p3@Defb30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Defb30_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 53bp_to_ENSMUST00000111209_5end |
EntrezGene: | Defb30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 5.61e-30 | 3 |
excretory tube | 5.61e-30 | 3 |
mesonephric epithelium | 5.61e-30 | 3 |
mesonephric tubule | 5.61e-30 | 3 |
nephric duct | 5.61e-30 | 3 |
kidney epithelium | 5.61e-30 | 3 |
renal duct | 5.61e-30 | 3 |
mesonephric duct | 5.61e-30 | 3 |
pronephric duct | 5.61e-30 | 3 |
mesonephros | 6.52e-23 | 4 |
duct of male reproductive system | 6.52e-23 | 4 |
male genital duct | 6.52e-23 | 4 |
pronephros | 6.52e-23 | 4 |
internal male genitalia | 6.52e-23 | 4 |
nephrogenic cord | 6.52e-23 | 4 |
urogenital ridge | 6.52e-23 | 4 |
pronephric mesoderm | 6.52e-23 | 4 |
rostral part of nephrogenic cord | 6.52e-23 | 4 |
presumptive pronephric mesoderm | 6.52e-23 | 4 |
duct | 8.67e-14 | 7 |
internal genitalia | 4.56e-11 | 9 |
intraembryonic coelom | 4.12e-10 | 10 |
kidney | 1.22e-07 | 14 |
kidney mesenchyme | 1.22e-07 | 14 |
upper urinary tract | 1.22e-07 | 14 |
intermediate mesoderm | 1.22e-07 | 14 |
kidney rudiment | 1.22e-07 | 14 |
kidney field | 1.22e-07 | 14 |
male reproductive organ | 3.18e-07 | 15 |
male organism | 7.35e-07 | 16 |
male reproductive system | 7.35e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.