FFCP PHASE1:Hg19::chr4:145567461..145567482,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14866|TSSclassifier=S|UniProt=|association_with_transcript=137bp_to_ENST00000434550_5end|coexpression_cluster_id=C606|description=CAGE_peak_9_at_HHIP_5end|id=chr4:145567461..145567482,+|ontology_enrichment_celltype=CL:0002139!5.19e-26!24;CL:0000071!1.27e-24!18;CL:0002546!1.27e-24!18;CL:0000115!1.59e-20!35;CL:0000222!1.14e-17!119;CL:0002078!7.74e-16!44;CL:1000413!1.48e-13!9;CL:0000213!2.97e-12!57;CL:0000215!2.97e-12!57;CL:0000359!7.11e-12!32;CL:0002544!1.76e-09!6;CL:0002543!4.40e-09!6;CL:0000680!7.96e-08!57;CL:0000056!7.96e-08!57;CL:0000355!7.96e-08!57;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42|ontology_enrichment_celltype_v019=CL:0002139;4.64e-59;24!CL:0000071;5.56e-58;18!CL:0000115;5.98e-42;36!CL:1000413;3.60e-34;9!CL:0002078;1.67e-25;45!CL:0002544;5.20e-23;6!CL:0002543;7.23e-22;6!CL:0000213;2.27e-20;58!CL:0000215;2.27e-20;58!CL:0002618;3.89e-12;3!CL:0000359;1.34e-11;32!CL:0000076;2.51e-10;63!CL:0002545;5.28e-09;2!CL:0002589;1.18e-08;2!CL:0002595;1.12e-07;5!CL:0000192;1.29e-07;43!CL:0002188;7.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0002139,1.44e-59,24;CL:0000071,1.54e-58,18;CL:0002546,1.54e-58,18;CL:0000115,2.80e-50,36;CL:0002078,5.17e-39,45;CL:1000413,1.87e-34,9;CL:0000213,1.05e-31,58;CL:0000215,1.05e-31,58;CL:0000222,6.02e-30,121;CL:0002544,3.02e-23,6;CL:0002543,3.75e-22,6;CL:0000076,1.92e-15,63;CL:0002618,3.76e-12,3;CL:0000359,5.57e-12,32;CL:0002321,7.93e-11,250;CL:0002545,4.19e-09,2;CL:0002589,9.81e-09,2;CL:0000192,2.45e-08,43;CL:0000514,2.45e-08,43;CL:0002595,1.27e-07,5;CL:0002188,7.94e-07,5|ontology_enrichment_development_v019=CL:0002546;5.56e-58;18!CL:0000222;3.99e-09;121!CL:0000514;1.29e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!3.09e-36!69;UBERON:0001981!4.42e-36!60;UBERON:0007500!4.42e-36!60;UBERON:0004537!4.42e-36!60;UBERON:0006965!4.42e-36!60;UBERON:0002049!7.99e-34!79;UBERON:0007798!7.99e-34!79;UBERON:0000025!1.62e-32!194;UBERON:0004872!5.16e-30!84;UBERON:0001637!8.17e-29!42;UBERON:0003509!8.17e-29!42;UBERON:0004572!8.17e-29!42;UBERON:0004111!3.43e-27!241;UBERON:0004535!1.23e-26!110;UBERON:0003914!2.00e-25!118;UBERON:0001009!2.16e-25!113;UBERON:0001986!1.27e-24!18;UBERON:0004638!1.27e-24!18;UBERON:0004852!1.27e-24!18;UBERON:0000477!2.10e-24!286;UBERON:0004573!1.77e-21!33;UBERON:0004571!1.77e-21!33;UBERON:0000119!7.57e-20!312;UBERON:0000483!4.04e-19!309;UBERON:0000487!6.93e-19!22;UBERON:0006914!1.01e-17!25;UBERON:0003915!1.48e-13!9;UBERON:0004700!1.48e-13!9;UBERON:0001917!1.48e-13!9;UBERON:0000947!3.23e-12!21;UBERON:0010191!3.23e-12!21;UBERON:0000490!1.73e-11!138;UBERON:0000468!3.66e-08!659;UBERON:0001049!4.16e-08!57;UBERON:0005068!4.16e-08!57;UBERON:0006241!4.16e-08!57;UBERON:0007135!4.16e-08!57;UBERON:0000467!4.76e-08!625;UBERON:0000922!5.43e-08!612;UBERON:0000480!5.63e-08!626;UBERON:0007023!6.51e-08!115;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0003081!1.10e-07!216;UBERON:0000923!2.34e-07!604;UBERON:0005291!2.34e-07!604;UBERON:0006598!2.34e-07!604;UBERON:0002532!2.34e-07!604;UBERON:0002385!4.80e-07!63;UBERON:0001015!4.80e-07!63;UBERON:0000383!4.80e-07!63;UBERON:0001638!4.85e-07!9;UBERON:0003920!4.85e-07!9;UBERON:0004582!4.85e-07!9;UBERON:0001134!7.29e-07!61;UBERON:0002036!7.29e-07!61;UBERON:0003082!7.29e-07!61;UBERON:0002616!7.46e-07!59|ontology_enrichment_uberon_v019=UBERON:0004638;5.56e-58;18!UBERON:0001986;5.56e-58;18!UBERON:0004852;5.56e-58;18!UBERON:0000487;1.22e-46;22!UBERON:0006914;1.63e-40;25!UBERON:0001637;2.68e-34;42!UBERON:0003509;2.68e-34;42!UBERON:0004572;2.68e-34;42!UBERON:0003915;3.60e-34;9!UBERON:0004700;3.60e-34;9!UBERON:0001917;3.60e-34;9!UBERON:0007500;1.74e-30;56!UBERON:0001981;1.74e-30;56!UBERON:0004537;1.74e-30;56!UBERON:0000490;3.38e-30;33!UBERON:0004573;1.39e-29;33!UBERON:0004571;1.39e-29;33!UBERON:0000055;3.64e-28;65!UBERON:0003914;1.80e-20;74!UBERON:0002049;4.34e-19;75!UBERON:0007798;4.34e-19;75!UBERON:0000947;1.70e-16;21!UBERON:0010191;1.70e-16;21!UBERON:0000025;1.57e-15;93!UBERON:0001638;2.28e-14;9!UBERON:0003920;2.28e-14;9!UBERON:0004582;2.28e-14;9!UBERON:0004535;4.76e-11;109!UBERON:0001009;2.83e-10;112!UBERON:0004111;9.51e-10;130!UBERON:0005800;5.28e-09;2!UBERON:0001515;5.28e-09;2!UBERON:0001529;1.18e-08;2!UBERON:0007204;1.18e-08;2!UBERON:0000119;1.20e-08;139!UBERON:0000483;9.28e-08;136!UBERON:0003834;1.12e-07;5!UBERON:0001533;1.12e-07;5!UBERON:0002066;1.92e-07;5!UBERON:0010260;8.25e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.54e-58,18;UBERON:0001986,1.54e-58,18;UBERON:0004852,1.54e-58,18;UBERON:0000055,1.54e-53,68;UBERON:0007500,2.14e-51,59;UBERON:0001981,2.14e-51,59;UBERON:0004537,2.14e-51,59;UBERON:0006965,2.14e-51,59;UBERON:0000487,4.32e-47,22;UBERON:0002049,1.34e-45,78;UBERON:0007798,1.34e-45,78;UBERON:0006914,6.56e-41,25;UBERON:0004872,2.83e-39,83;UBERON:0001637,3.90e-39,42;UBERON:0003509,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=137bp_to_ENST00000434550_5end | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_9_at_HHIP_5end | |||
|id=chr4:145567461..145567482,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.19e-26!24;CL:0000071!1.27e-24!18;CL:0002546!1.27e-24!18;CL:0000115!1.59e-20!35;CL:0000222!1.14e-17!119;CL:0002078!7.74e-16!44;CL:1000413!1.48e-13!9;CL:0000213!2.97e-12!57;CL:0000215!2.97e-12!57;CL:0000359!7.11e-12!32;CL:0002544!1.76e-09!6;CL:0002543!4.40e-09!6;CL:0000680!7.96e-08!57;CL:0000056!7.96e-08!57;CL:0000355!7.96e-08!57;CL:0000192!1.30e-07!42;CL:0000514!1.30e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.64e-59;24!CL:0000071;5.56e-58;18!CL:0000115;5.98e-42;36!CL:1000413;3.60e-34;9!CL:0002078;1.67e-25;45!CL:0002544;5.20e-23;6!CL:0002543;7.23e-22;6!CL:0000213;2.27e-20;58!CL:0000215;2.27e-20;58!CL:0002618;3.89e-12;3!CL:0000359;1.34e-11;32!CL:0000076;2.51e-10;63!CL:0002545;5.28e-09;2!CL:0002589;1.18e-08;2!CL:0002595;1.12e-07;5!CL:0000192;1.29e-07;43!CL:0002188;7.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.44e-59,24;CL:0000071,1.54e-58,18;CL:0002546,1.54e-58,18;CL:0000115,2.80e-50,36;CL:0002078,5.17e-39,45;CL:1000413,1.87e-34,9;CL:0000213,1.05e-31,58;CL:0000215,1.05e-31,58;CL:0000222,6.02e-30,121;CL:0002544,3.02e-23,6;CL:0002543,3.75e-22,6;CL:0000076,1.92e-15,63;CL:0002618,3.76e-12,3;CL:0000359,5.57e-12,32;CL:0002321,7.93e-11,250;CL:0002545,4.19e-09,2;CL:0002589,9.81e-09,2;CL:0000192,2.45e-08,43;CL:0000514,2.45e-08,43;CL:0002595,1.27e-07,5;CL:0002188,7.94e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.56e-58;18!CL:0000222;3.99e-09;121!CL:0000514;1.29e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.09e-36!69;UBERON:0001981!4.42e-36!60;UBERON:0007500!4.42e-36!60;UBERON:0004537!4.42e-36!60;UBERON:0006965!4.42e-36!60;UBERON:0002049!7.99e-34!79;UBERON:0007798!7.99e-34!79;UBERON:0000025!1.62e-32!194;UBERON:0004872!5.16e-30!84;UBERON:0001637!8.17e-29!42;UBERON:0003509!8.17e-29!42;UBERON:0004572!8.17e-29!42;UBERON:0004111!3.43e-27!241;UBERON:0004535!1.23e-26!110;UBERON:0003914!2.00e-25!118;UBERON:0001009!2.16e-25!113;UBERON:0001986!1.27e-24!18;UBERON:0004638!1.27e-24!18;UBERON:0004852!1.27e-24!18;UBERON:0000477!2.10e-24!286;UBERON:0004573!1.77e-21!33;UBERON:0004571!1.77e-21!33;UBERON:0000119!7.57e-20!312;UBERON:0000483!4.04e-19!309;UBERON:0000487!6.93e-19!22;UBERON:0006914!1.01e-17!25;UBERON:0003915!1.48e-13!9;UBERON:0004700!1.48e-13!9;UBERON:0001917!1.48e-13!9;UBERON:0000947!3.23e-12!21;UBERON:0010191!3.23e-12!21;UBERON:0000490!1.73e-11!138;UBERON:0000468!3.66e-08!659;UBERON:0001049!4.16e-08!57;UBERON:0005068!4.16e-08!57;UBERON:0006241!4.16e-08!57;UBERON:0007135!4.16e-08!57;UBERON:0000467!4.76e-08!625;UBERON:0000922!5.43e-08!612;UBERON:0000480!5.63e-08!626;UBERON:0007023!6.51e-08!115;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0003081!1.10e-07!216;UBERON:0000923!2.34e-07!604;UBERON:0005291!2.34e-07!604;UBERON:0006598!2.34e-07!604;UBERON:0002532!2.34e-07!604;UBERON:0002385!4.80e-07!63;UBERON:0001015!4.80e-07!63;UBERON:0000383!4.80e-07!63;UBERON:0001638!4.85e-07!9;UBERON:0003920!4.85e-07!9;UBERON:0004582!4.85e-07!9;UBERON:0001134!7.29e-07!61;UBERON:0002036!7.29e-07!61;UBERON:0003082!7.29e-07!61;UBERON:0002616!7.46e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.56e-58;18!UBERON:0001986;5.56e-58;18!UBERON:0004852;5.56e-58;18!UBERON:0000487;1.22e-46;22!UBERON:0006914;1.63e-40;25!UBERON:0001637;2.68e-34;42!UBERON:0003509;2.68e-34;42!UBERON:0004572;2.68e-34;42!UBERON:0003915;3.60e-34;9!UBERON:0004700;3.60e-34;9!UBERON:0001917;3.60e-34;9!UBERON:0007500;1.74e-30;56!UBERON:0001981;1.74e-30;56!UBERON:0004537;1.74e-30;56!UBERON:0000490;3.38e-30;33!UBERON:0004573;1.39e-29;33!UBERON:0004571;1.39e-29;33!UBERON:0000055;3.64e-28;65!UBERON:0003914;1.80e-20;74!UBERON:0002049;4.34e-19;75!UBERON:0007798;4.34e-19;75!UBERON:0000947;1.70e-16;21!UBERON:0010191;1.70e-16;21!UBERON:0000025;1.57e-15;93!UBERON:0001638;2.28e-14;9!UBERON:0003920;2.28e-14;9!UBERON:0004582;2.28e-14;9!UBERON:0004535;4.76e-11;109!UBERON:0001009;2.83e-10;112!UBERON:0004111;9.51e-10;130!UBERON:0005800;5.28e-09;2!UBERON:0001515;5.28e-09;2!UBERON:0001529;1.18e-08;2!UBERON:0007204;1.18e-08;2!UBERON:0000119;1.20e-08;139!UBERON:0000483;9.28e-08;136!UBERON:0003834;1.12e-07;5!UBERON:0001533;1.12e-07;5!UBERON:0002066;1.92e-07;5!UBERON:0010260;8.25e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.54e-58,18;UBERON:0001986,1.54e-58,18;UBERON:0004852,1.54e-58,18;UBERON:0000055,1.54e-53,68;UBERON:0007500,2.14e-51,59;UBERON:0001981,2.14e-51,59;UBERON:0004537,2.14e-51,59;UBERON:0006965,2.14e-51,59;UBERON:0000487,4.32e-47,22;UBERON:0002049,1.34e-45,78;UBERON:0007798,1.34e-45,78;UBERON:0006914,6.56e-41,25;UBERON:0004872,2.83e-39,83;UBERON:0001637,3.90e-39,42;UBERON:0003509,3.90e-39,42;UBERON:0004572,3.90e-39,42;UBERON:0003915,1.87e-34,9;UBERON:0004700,1.87e-34,9;UBERON:0001917,1.87e-34,9;UBERON:0004535,2.17e-34,109;UBERON:0004573,1.57e-33,33;UBERON:0004571,1.57e-33,33;UBERON:0003914,3.07e-33,117;UBERON:0001009,3.10e-33,112;UBERON:0000025,2.10e-23,192;UBERON:0004111,1.97e-20,240;UBERON:0000490,5.44e-17,148;UBERON:0000947,1.58e-16,21;UBERON:0010191,1.58e-16,21;UBERON:0003081,1.90e-16,203;UBERON:0001638,1.49e-14,9;UBERON:0003920,1.49e-14,9;UBERON:0004582,1.49e-14,9;UBERON:0000483,8.56e-14,306;UBERON:0000119,1.45e-13,309;UBERON:0005800,4.19e-09,2;UBERON:0001515,4.19e-09,2;UBERON:0001529,9.81e-09,2;UBERON:0007204,9.81e-09,2;UBERON:0000926,3.01e-08,315;UBERON:0004120,3.01e-08,315;UBERON:0006603,3.01e-08,315;UBERON:0003834,1.27e-07,5;UBERON:0001533,1.27e-07,5;UBERON:0002066,1.89e-07,5;UBERON:0007503,3.53e-07,78;UBERON:0010260,8.33e-07,9 | |||
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|short_description=p9@HHIP | |||
}} |
Revision as of 02:38, 13 September 2013
Short description: | p9@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 137bp_to_ENST00000434550_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.44e-59 | 24 |
blood vessel endothelial cell | 1.54e-58 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.54e-58 | 18 |
endothelial cell | 2.80e-50 | 36 |
meso-epithelial cell | 5.17e-39 | 45 |
endothelial cell of artery | 1.87e-34 | 9 |
lining cell | 1.05e-31 | 58 |
barrier cell | 1.05e-31 | 58 |
mesodermal cell | 6.02e-30 | 121 |
aortic endothelial cell | 3.02e-23 | 6 |
vein endothelial cell | 3.75e-22 | 6 |
squamous epithelial cell | 1.92e-15 | 63 |
endothelial cell of umbilical vein | 3.76e-12 | 3 |
vascular associated smooth muscle cell | 5.57e-12 | 32 |
embryonic cell | 7.93e-11 | 250 |
thoracic aorta endothelial cell | 4.19e-09 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 9.81e-09 | 2 |
smooth muscle cell | 2.45e-08 | 43 |
smooth muscle myoblast | 2.45e-08 | 43 |
smooth muscle cell of the subclavian artery | 1.27e-07 | 5 |
glomerular endothelial cell | 7.94e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.