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FFCP PHASE1:Mm9::chr14:51564198..51564209,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18950|HGNC=|MCL_coexpression_id=2913|UniProt=P23492,Q543K9|association_with_transcript=220bp_to_NM_013632,uc007tme.2_5end|description=CAGE_peak_2_at_Pnp_5end|id=chr14:51564198..51564209,+|ontology_enrichment_celltype=CL:0000063!1.04e-10!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.14e-13!130;UBERON:0000925!1.14e-13!130;UBERON:0006595!1.14e-13!130;UBERON:0001007!6.58e-13!128;UBERON:0001555!6.58e-13!128;UBERON:0007026!6.58e-13!128;UBERON:0004921!5.46e-12!126;UBERON:0004185!5.46e-12!126;UBERON:0005409!1.50e-09!59;UBERON:0004923!2.10e-09!24;UBERON:0009569!4.55e-09!66;UBERON:0003104!1.43e-08!131;UBERON:0009142!1.43e-08!131;UBERON:0000160!9.40e-08!43;UBERON:0002100!1.70e-07!98;UBERON:0005172!3.89e-07!49;UBERON:0005173!3.89e-07!49;UBERON:0002417!3.89e-07!49;UBERON:0000916!3.89e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.50e-15,118;UBERON:0000925,3.50e-15,118;UBERON:0006595,3.50e-15,118;UBERON:0001007,2.22e-14,116;UBERON:0001555,2.22e-14,116;UBERON:0007026,2.22e-14,116;UBERON:0004921,2.10e-13,114;UBERON:0005409,2.75e-12,47;UBERON:0000160,4.85e-11,31;UBERON:0002100,2.26e-10,90;UBERON:0004923,2.10e-09,24;UBERON:0009569,4.54e-09,66;UBERON:0003104,1.59e-08,61;UBERON:0009142,1.59e-08,61;UBERON:0005177,1.87e-07,79;UBERON:0005172,3.89e-07,49;UBERON:0005173,3.89e-07,49;UBERON:0002417,3.89e-07,49;UBERON:0000916,3.89e-07,49;UBERON:0005256,9.20e-07,45|phase1_expression=5.60520964866779,20.9385244583617,22.7499619694768,14.5182821427278,8.5152274090879,6.88305014838748,8.41005506143892,5.29405626110463,8.16574588479667,7.95819389494778,6.16384685611818,3.74929147278081,6.16322627752341,4.45844052336887,12.3250611871795,18.8301998672538,25.8837894907414,12.3030244489713,11.7918412900935,9.33657233955666,4.67738095830884,16.2837159969452,23.5079810225042,16.1592347021341,22.4821095445827,20.0981187440257,18.9535278309993,21.1161808032171,16.9120843316173,13.3575968772763,14.1907526819395,6.98533740805594,7.99584223859941,15.8481681015439,12.7094712690561,15.4598220183398,11.8418226632174,24.6933662134776,27.346737058333,27.2232346866375,18.2351761289614,12.9778642142105,23.7900072985265,11.8343008897043,14.192770370732,12.2976323948327,0.782391344348039,3.70642765846759,2.85592037554813,4.47188767870852,4.75953833526233,1.43752564364972,17.1138258178891,10.8804321301702,7.73015738027667,15.4355661621568,13.1805382371828,14.4388185837684,1.61853168687678,1.5869729378161,0.633831403506179,5.42151251310611,5.33576877666684,6.74924787961049,3.9554654502679,4.2628806896766,2.69640099466564,2.68952813725088,1.8664130215526,1.21505344498522,1.89292465216244,2.85650984403804,2.65042249141936,1.5923803897944,1.34183659425531,0,2.20231761998777,2.68143409978894,2.61131106535614,1.97829431595291,2.10421580285542,1.04182674111352,2.79182999001381,2.8138130501584,3.81995619442025,2.94628585473668,1.99320353118744,1.86399445825301,10.3744884866462,14.5097395405028,15.9425468785923,18.9293252935905,9.51959867190851,9.17495425784289,7.79731700937203,11.2006721774334,9.12888730856387,19.5994870964766,19.743736349818,15.9002808529653,4.3661460130771,15.3991772897181,10.1922095882658,0,12.9894624606728,13.4280728701802,14.1546844604139,9.93399753555822,10.616453229534,6.67989625791711,6.7659277438793,4.87144765299426,5.99600292865752,6.0289056221049,5.52666923537813,8.41966161908826,14.5845030963281,11.7125479105128,20.3460426948471,4.69123864847487,8.17113618303456,14.5462575940567,16.775258509631,1.46390398505774,4.1889341362691,19.1592791406444,11.981512450592,11.3981518888747,11.817531117795,3.74476598512057,1.37250180845588,2.26177833803156,1.91206752211504,0.511430914660661,3.74018480207208,3.0825839982874,6.61955865027056,10.0769646194175,11.8779696463827,6.73413938836717,8.32770834961304,5.9774547152703,7.56260945182467,5.57607825992146,3.40182495756639,3.58718416797579,4.31027932974753,6.72628763921441,9.91612767491074,4.53854592402766,5.10258260075452,5.04150184583422,3.05851974148158,3.83077383174383,4.93877127379064,3.58261680273288,14.7464769335779,18.2717014051448,17.0498099637356,5.79952163099405,2.81431271977315,4.8616756594474,4.49814997611899,4.32881309844288,2.93107514486019,4.41814495025775,3.75582761959467,4.08678698285093,2.46839774870221,4.92502392237286,3.81023404865522,1.75439984910399,5.04965265169416,4.02619256281115,1.05144974282064,2.16099685996497,32.3810407324122,17.1892868331304,4.90562976231038,5.80591679651096,8.11865006329188,11.0925938542838,11.5636582799333,15.978952593455,9.01605216934572,18.4462829290892,16.8394589896181,15.3196483471686,17.7417319278399,17.0775687644302,17.9394581395996,14.7364542208232,14.035424670528,6.62641373136427,12.3978509240388,5.29493452397817,9.69762435838129,7.99548346749632,10.6869747739995,11.6612016903886,12.8738956829927,15.6714398180687,6.81841042300442,8.5091003915208,9.63139076054695,10.5685192820881,9.94014594803664,11.0941493486112,7.6387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|EntrezGene=18950
|HGNC=
|MCL_coexpression_id=2913
|UniProt=P23492,Q543K9
|association_with_transcript=220bp_to_NM_013632,uc007tme.2_5end
|description=CAGE_peak_2_at_Pnp_5end
|id=chr14:51564198..51564209,+
|ontology_enrichment_celltype=CL:0000063!1.04e-10!66
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.14e-13!130;UBERON:0000925!1.14e-13!130;UBERON:0006595!1.14e-13!130;UBERON:0001007!6.58e-13!128;UBERON:0001555!6.58e-13!128;UBERON:0007026!6.58e-13!128;UBERON:0004921!5.46e-12!126;UBERON:0004185!5.46e-12!126;UBERON:0005409!1.50e-09!59;UBERON:0004923!2.10e-09!24;UBERON:0009569!4.55e-09!66;UBERON:0003104!1.43e-08!131;UBERON:0009142!1.43e-08!131;UBERON:0000160!9.40e-08!43;UBERON:0002100!1.70e-07!98;UBERON:0005172!3.89e-07!49;UBERON:0005173!3.89e-07!49;UBERON:0002417!3.89e-07!49;UBERON:0000916!3.89e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.50e-15,118;UBERON:0000925,3.50e-15,118;UBERON:0006595,3.50e-15,118;UBERON:0001007,2.22e-14,116;UBERON:0001555,2.22e-14,116;UBERON:0007026,2.22e-14,116;UBERON:0004921,2.10e-13,114;UBERON:0005409,2.75e-12,47;UBERON:0000160,4.85e-11,31;UBERON:0002100,2.26e-10,90;UBERON:0004923,2.10e-09,24;UBERON:0009569,4.54e-09,66;UBERON:0003104,1.59e-08,61;UBERON:0009142,1.59e-08,61;UBERON:0005177,1.87e-07,79;UBERON:0005172,3.89e-07,49;UBERON:0005173,3.89e-07,49;UBERON:0002417,3.89e-07,49;UBERON:0000916,3.89e-07,49;UBERON:0005256,9.20e-07,45
|phase1_expression=5.60520964866779,20.9385244583617,22.7499619694768,14.5182821427278,8.5152274090879,6.88305014838748,8.41005506143892,5.29405626110463,8.16574588479667,7.95819389494778,6.16384685611818,3.74929147278081,6.16322627752341,4.45844052336887,12.3250611871795,18.8301998672538,25.8837894907414,12.3030244489713,11.7918412900935,9.33657233955666,4.67738095830884,16.2837159969452,23.5079810225042,16.1592347021341,22.4821095445827,20.0981187440257,18.9535278309993,21.1161808032171,16.9120843316173,13.3575968772763,14.1907526819395,6.98533740805594,7.99584223859941,15.8481681015439,12.7094712690561,15.4598220183398,11.8418226632174,24.6933662134776,27.346737058333,27.2232346866375,18.2351761289614,12.9778642142105,23.7900072985265,11.8343008897043,14.192770370732,12.2976323948327,0.782391344348039,3.70642765846759,2.85592037554813,4.47188767870852,4.75953833526233,1.43752564364972,17.1138258178891,10.8804321301702,7.73015738027667,15.4355661621568,13.1805382371828,14.4388185837684,1.61853168687678,1.5869729378161,0.633831403506179,5.42151251310611,5.33576877666684,6.74924787961049,3.9554654502679,4.2628806896766,2.69640099466564,2.68952813725088,1.8664130215526,1.21505344498522,1.89292465216244,2.85650984403804,2.65042249141936,1.5923803897944,1.34183659425531,0,2.20231761998777,2.68143409978894,2.61131106535614,1.97829431595291,2.10421580285542,1.04182674111352,2.79182999001381,2.8138130501584,3.81995619442025,2.94628585473668,1.99320353118744,1.86399445825301,10.3744884866462,14.5097395405028,15.9425468785923,18.9293252935905,9.51959867190851,9.17495425784289,7.79731700937203,11.2006721774334,9.12888730856387,19.5994870964766,19.743736349818,15.9002808529653,4.3661460130771,15.3991772897181,10.1922095882658,0,12.9894624606728,13.4280728701802,14.1546844604139,9.93399753555822,10.616453229534,6.67989625791711,6.7659277438793,4.87144765299426,5.99600292865752,6.0289056221049,5.52666923537813,8.41966161908826,14.5845030963281,11.7125479105128,20.3460426948471,4.69123864847487,8.17113618303456,14.5462575940567,16.775258509631,1.46390398505774,4.1889341362691,19.1592791406444,11.981512450592,11.3981518888747,11.817531117795,3.74476598512057,1.37250180845588,2.26177833803156,1.91206752211504,0.511430914660661,3.74018480207208,3.0825839982874,6.61955865027056,10.0769646194175,11.8779696463827,6.73413938836717,8.32770834961304,5.9774547152703,7.56260945182467,5.57607825992146,3.40182495756639,3.58718416797579,4.31027932974753,6.72628763921441,9.91612767491074,4.53854592402766,5.10258260075452,5.04150184583422,3.05851974148158,3.83077383174383,4.93877127379064,3.58261680273288,14.7464769335779,18.2717014051448,17.0498099637356,5.79952163099405,2.81431271977315,4.8616756594474,4.49814997611899,4.32881309844288,2.93107514486019,4.41814495025775,3.75582761959467,4.08678698285093,2.46839774870221,4.92502392237286,3.81023404865522,1.75439984910399,5.04965265169416,4.02619256281115,1.05144974282064,2.16099685996497,32.3810407324122,17.1892868331304,4.90562976231038,5.80591679651096,8.11865006329188,11.0925938542838,11.5636582799333,15.978952593455,9.01605216934572,18.4462829290892,16.8394589896181,15.3196483471686,17.7417319278399,17.0775687644302,17.9394581395996,14.7364542208232,14.035424670528,6.62641373136427,12.3978509240388,5.29493452397817,9.69762435838129,7.99548346749632,10.6869747739995,11.6612016903886,12.8738956829927,15.6714398180687,6.81841042300442,8.5091003915208,9.63139076054695,10.5685192820881,9.94014594803664,11.0941493486112,7.63877555344259,8.34318798607351,9.24170792617702,10.7078951143352,4.31304619582064,8.18710084870708,11.5453939052387,13.1341016532498,16.5045620440159,13.5084185981743,11.2699446001629,6.06372517665551,5.70377417547091,6.78980343100753,7.74477819352057,6.53274404023081,6.9032655856944,8.78101415360095,10.719189799221,9.52298165489732,7.17546458958692,10.4872521418072,10.7064688756855,10.7040303350319,24.1266054302836,36.9855864996723,6.39293554924747,7.17435540392304,3.53211297973142,3.39913891117389,4.75411341592359,3.02965112645248,2.52406575533005,3.90438744296638,2.58508077279359,3.10659437338318,3.11918143715352,1.69845918473299,3.64329631507405,3.79932615284705,1.18586333383957,0.321321316421807,6.95506417520516,7.12262414669021,4.88660878060728,8.08353602565424,2.65490276679926,3.64170954232472,6.34879469625977,5.84675747243284,7.08724542913855,8.60818414242997,8.5281336745513,7.99774204850512,4.63446591900138,5.05658812697306,3.16255825724996,5.15677716240934,9.53230896110606,5.76195500900193,8.92574918101006,4.50107773566344,5.32020700926821,5.52943334566419,6.91105886528908,6.08929898229199,14.3149741918863,15.0400770313312,4.19003956304428,2.80306630000516,6.45857706783622,5.54878909339034,4.41677672811605,2.62625439592098,20.1121777274597,3.70850604021019,14.8657666294132,6.81076664278634,12.0376442790313,15.4462134743847,14.3528939107076,16.2432502976631,12.2384469595576,14.9748053986314,9.39759821870082,12.4107180341965,5.69404788446044,7.72613975082025,5.83228840437727,6.89991376847747,6.76923947613151,5.93403124093211,7.3561575595549,8.11443420150492,9.85073797017626,6.83473244395618,1.69107881605257,3.88743019714345,4.63283773279873,3.88902376688095,4.39143399824286,5.91346439217724,2.8165737274981,3.1249052362548,1.78260885523708,1.93267296660805,2.01621004380506,5.05617793005085,5.0681303822541,6.26536838705446,6.36612032591196,6.08690765269437,4.96703386953162,6.25016337503838,5.61220203263393,4.54349024766664,3.65792671943999,4.63800451629466,3.70339946811059,4.81059208201647,3.97381467417334,4.0811469050738,7.5475224147182,13.1879369215929,10.2409615982088,6.37525660306228,19.3312949714717,8.42497471629419,7.28852488868824,5.517293144389,2.25900737046827,2.76195141904306,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,0,4.77421798887213,5.1873233542134,5.9756762013947,4.86213434136588,4.61148957781561,4.59608771125035,2.22246727801615,4.12070114477788,2.56735367673452,4.54854981174835,4.81610669791456,4.14977951049368,2.99652823903624,5.05798703998467,4.02048282689293,6.19181798667996,4.28772005995965,4.82273051159263,5.35711671044299,4.56316652416632,3.42869252385415,3.72699192934609,5.48403236878838,3.0522747492789,3.85848459702856,4.56918882615053,2.92684756596436,4.47218509444333,4.07412341537585,2.80571135828869,2.96587545310435,2.46261205938909,4.91077251803627,4.18329471202108,3.66522560864169,4.24677982494508,5.38042699424439,7.52048689169044,4.59091996965224,6.17655973534643,5.79669589051054
|short_description=p2@Pnp
}}

Revision as of 02:14, 13 September 2013

Short description:p2@Pnp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pnp_5end
Coexpression cluster:MCL_coexpression_mm9:2913
Association with transcript: 220bp_to_NM_013632, uc007tme.2_5end
EntrezGene:Pnp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pnp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.79
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.51
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.48
GP2+ M cell, pool1.CNhs13228.11845-124H920.10
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I221.12
Ileum epithelium, pool1.CNhs13199.10252-104B916.91
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D910.37
Mouse Schwann, donor2.CNhs12573.11746-123F914.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.90
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.93
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A814.58
aorta, adult.CNhs10498.46-23H111.71
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H719.16
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.82
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.08
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C68.33
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.27
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.05
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.09
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I332.38
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D88.12
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F715.98
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E918.45
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E317.94
intestine, neonate N30.CNhs11131.1384-42G114.74
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G78.00
kidney, neonate N10.CNhs11206.758-6D510.69
kidney, neonate N20.CNhs11113.832-19I111.66
kidney, neonate N25.CNhs11122.1353-25F312.87
kidney, neonate N30.CNhs11203.1385-42H115.67
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F88.51
liver, embryo E13.CNhs10524.378-3H69.63
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D79.94
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G210.71
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A313.13
liver, neonate N25.CNhs11198.1368-26H116.50
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E510.72
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A136.99
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G315.04
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I120.11
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F212.04
spleen, neonate N10.CNhs11116.752-24D115.45
spleen, neonate N20.CNhs11112.824-19H114.35
spleen, neonate N25.CNhs11099.1354-25G316.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.40
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E35.69
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A97.36
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C56.37
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D33.66
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F519.33
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.50e-15118
endoderm3.50e-15118
presumptive endoderm3.50e-15118
digestive system2.22e-14116
digestive tract2.22e-14116
primitive gut2.22e-14116
subdivision of digestive tract2.10e-13114
gastrointestinal system2.75e-1247
intestine4.85e-1131
trunk2.26e-1090
organ component layer2.10e-0924
subdivision of trunk4.54e-0966
mesenchyme1.59e-0861
entire embryonic mesenchyme1.59e-0861
trunk region element1.87e-0779
abdomen element3.89e-0749
abdominal segment element3.89e-0749
abdominal segment of trunk3.89e-0749
abdomen3.89e-0749
trunk mesenchyme9.20e-0745







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