FFCP PHASE1:Hg19::chr4:100237205..100237224,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2765|description=CAGE_peak_at_chr4:100237205..100237224,-|id=chr4:100237205..100237224,-|ontology_enrichment_celltype=CL:0000136!1.56e-20!15;CL:0002615!2.82e-07!3;CL:0000325!7.75e-07!39|ontology_enrichment_celltype_v019=CL:0000136;1.82e-33;13!CL:0002615;1.79e-12;3!CL:0002564;1.65e-11;3!CL:0002602;1.38e-08;2|ontology_enrichment_celltype_v019_2=CL:0000136,9.64e-29,15;CL:0002615,1.69e-12,3;CL:0002564,1.92e-11,3;CL:0002602,1.43e-08,2|ontology_enrichment_development_v019=UBERON:0006965;9.25e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.23e-23!115;UBERON:0001007!1.23e-07!155;UBERON:0001555!1.23e-07!155;UBERON:0007026!1.23e-07!155;UBERON:0004921!1.44e-07!129;UBERON:0004185!1.44e-07!129;UBERON:0001044!1.79e-07!6;UBERON:0003293!1.79e-07!6;UBERON:0003294!1.79e-07!6;UBERON:0010047!1.79e-07!6;UBERON:0000167!1.79e-07!6|ontology_enrichment_uberon_v019=UBERON:0011135;2.26e-18;5!UBERON:0002216;2.26e-18;5!UBERON:0011134;2.26e-18;5!UBERON:0002209;2.26e-18;5!UBERON:0002213;2.26e-18;5!UBERON:0007844;2.26e-18;5!UBERON:0011138;2.26e-18;5!UBERON:0001130;2.26e-18;5!UBERON:0001066;2.26e-18;5!UBERON:0001468;2.26e-18;5!UBERON:0002242;1.65e-11;3!UBERON:0004905;2.22e-11;8!UBERON:0000982;2.22e-11;8!UBERON:0004770;2.22e-11;8!UBERON:0004151;4.39e-11;3!UBERON:0006444;1.38e-08;2!UBERON:0001995;1.38e-08;2!UBERON:0004715;1.38e-08;2!UBERON:0002081;6.05e-08;2!UBERON:0005406;6.05e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.72e-18,5;UBERON:0002216,2.72e-18,5;UBERON:0011134,2.72e-18,5;UBERON:0002209,2.72e-18,5;UBERON:0002213,2.72e-18,5;UBERON:0005856,2.72e-18,5;UBERON:0005866,2.72e-18,5;UBERON:0005863,2.72e-18,5;UBERON:0007844,2.72e-18,5;UBERON:0011138,2.72e-18,5;UBERON:0001130,2.72e-18,5;UBERON:0001066,2.72e-18,5;UBERON:0001468,2.72e-18,5;UBERON:0002242,1.92e-11,3;UBERON:0003068,1.92e-11,3;UBERON:0002328,1.92e-11,3;UBERON:0004880,1.92e-11,3;UBERON:0004905,2.49e-11,8;UBERON:0000982,2.49e-11,8;UBERON:0004770,2.49e-11,8;UBERON:0007023,3.41e-11,114;UBERON:0004151,4.90e-11,3;UBERON:0006444,1.43e-08,2;UBERON:0001995,1.43e-08,2;UBERON:0004715,1.43e-08,2;UBERON:0005406,3.77e-08,2;UBERON:0002081,5.63e-08,2;UBERON:0010227,5.63e-08,2|phase1_expression=0.363356758541113,6.63711624062048,2.39622486963151,8.00586386825043,8.49226079411847,1.74467704820074,2.53299878168311,0.631719873426831,4.96252693579693,0,0,0,0,2.35156070624089,3.31397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.826606249406124,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.276149695926898,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,13.7595810334868,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,1.50051156317903,1.08506009479894,0.207970861530807,0,0,0,0,0,5.17365356462525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0557983627835,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,2.56763392820352,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0,0,0,10.9206808901064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20445803922606,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0.276283915531148,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.35784623083787,0,0.225980740780532,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,2.06244381610515,1.43574604915363,0.998395002494955,0.858452096273142,0.669514372325618,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0.640724475406168,0.943225830597996,2.07119527673598,3.47316215268366,0,0,0,1.08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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2765 | |||
|description=CAGE_peak_at_chr4:100237205..100237224,- | |||
|id=chr4:100237205..100237224,- | |||
|ontology_enrichment_celltype=CL:0000136!1.56e-20!15;CL:0002615!2.82e-07!3;CL:0000325!7.75e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.82e-33;13!CL:0002615;1.79e-12;3!CL:0002564;1.65e-11;3!CL:0002602;1.38e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.64e-29,15;CL:0002615,1.69e-12,3;CL:0002564,1.92e-11,3;CL:0002602,1.43e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.25e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-23!115;UBERON:0001007!1.23e-07!155;UBERON:0001555!1.23e-07!155;UBERON:0007026!1.23e-07!155;UBERON:0004921!1.44e-07!129;UBERON:0004185!1.44e-07!129;UBERON:0001044!1.79e-07!6;UBERON:0003293!1.79e-07!6;UBERON:0003294!1.79e-07!6;UBERON:0010047!1.79e-07!6;UBERON:0000167!1.79e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.26e-18;5!UBERON:0002216;2.26e-18;5!UBERON:0011134;2.26e-18;5!UBERON:0002209;2.26e-18;5!UBERON:0002213;2.26e-18;5!UBERON:0007844;2.26e-18;5!UBERON:0011138;2.26e-18;5!UBERON:0001130;2.26e-18;5!UBERON:0001066;2.26e-18;5!UBERON:0001468;2.26e-18;5!UBERON:0002242;1.65e-11;3!UBERON:0004905;2.22e-11;8!UBERON:0000982;2.22e-11;8!UBERON:0004770;2.22e-11;8!UBERON:0004151;4.39e-11;3!UBERON:0006444;1.38e-08;2!UBERON:0001995;1.38e-08;2!UBERON:0004715;1.38e-08;2!UBERON:0002081;6.05e-08;2!UBERON:0005406;6.05e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.72e-18,5;UBERON:0002216,2.72e-18,5;UBERON:0011134,2.72e-18,5;UBERON:0002209,2.72e-18,5;UBERON:0002213,2.72e-18,5;UBERON:0005856,2.72e-18,5;UBERON:0005866,2.72e-18,5;UBERON:0005863,2.72e-18,5;UBERON:0007844,2.72e-18,5;UBERON:0011138,2.72e-18,5;UBERON:0001130,2.72e-18,5;UBERON:0001066,2.72e-18,5;UBERON:0001468,2.72e-18,5;UBERON:0002242,1.92e-11,3;UBERON:0003068,1.92e-11,3;UBERON:0002328,1.92e-11,3;UBERON:0004880,1.92e-11,3;UBERON:0004905,2.49e-11,8;UBERON:0000982,2.49e-11,8;UBERON:0004770,2.49e-11,8;UBERON:0007023,3.41e-11,114;UBERON:0004151,4.90e-11,3;UBERON:0006444,1.43e-08,2;UBERON:0001995,1.43e-08,2;UBERON:0004715,1.43e-08,2;UBERON:0005406,3.77e-08,2;UBERON:0002081,5.63e-08,2;UBERON:0010227,5.63e-08,2 | |||
|phase1_expression=0.363356758541113,6.63711624062048,2.39622486963151,8.00586386825043,8.49226079411847,1.74467704820074,2.53299878168311,0.631719873426831,4.96252693579693,0,0,0,0,2.35156070624089,3.31397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.826606249406124,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.276149695926898,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,13.7595810334868,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,1.50051156317903,1.08506009479894,0.207970861530807,0,0,0,0,0,5.17365356462525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0557983627835,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,2.56763392820352,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0,0,0,10.9206808901064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20445803922606,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0.276283915531148,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.35784623083787,0,0.225980740780532,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,2.06244381610515,1.43574604915363,0.998395002494955,0.858452096273142,0.669514372325618,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0.640724475406168,0.943225830597996,2.07119527673598,3.47316215268366,0,0,0,1.08803560673895,2.2562090462043,5.20787480497885,11.803414705553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,1.09651553371436,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0.414432328326074,2.3900586793153,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,2.20633489578515,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0,0,1.0580536810308,0,0,0.865253124247578,0,0,0,0,0,0,0,1.36401656792831,0,0,0,0.639701945702943,0,0,0,0,0.445530107947154,0,1.52401723527873,0,0,0.358611026963382,0.665320713092027,0,0,0,0,0,0.244482888365733,0,9.32059483859718,4.02547587182052,0 | |||
|short_description=p@chr4:100237205..100237224,- | |||
}} |
Revision as of 01:45, 13 September 2013
Short description: | p@chr4:100237205..100237224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:100237205..100237224, - |
Coexpression cluster: | C2765_liver_Hepatocyte_mature_Nucleus_Anulus_adipose_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.64e-29 | 15 |
adipocyte of omentum tissue | 1.69e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 1.92e-11 | 3 |
annulus pulposus cell | 1.43e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.72e-18 | 5 |
symphysis | 2.72e-18 | 5 |
nonsynovial joint | 2.72e-18 | 5 |
fibrous joint | 2.72e-18 | 5 |
cartilaginous joint | 2.72e-18 | 5 |
developing mesenchymal condensation | 2.72e-18 | 5 |
pre-cartilage condensation | 2.72e-18 | 5 |
cartilaginous condensation | 2.72e-18 | 5 |
cartilage element | 2.72e-18 | 5 |
post-cranial axial skeletal system | 2.72e-18 | 5 |
vertebral column | 2.72e-18 | 5 |
intervertebral disk | 2.72e-18 | 5 |
intervertebral joint | 2.72e-18 | 5 |
nucleus pulposus | 1.92e-11 | 3 |
axial mesoderm | 1.92e-11 | 3 |
notochord | 1.92e-11 | 3 |
chordamesoderm | 1.92e-11 | 3 |
articulation | 2.49e-11 | 8 |
skeletal joint | 2.49e-11 | 8 |
articular system | 2.49e-11 | 8 |
adult organism | 3.41e-11 | 114 |
cardiac chamber | 4.90e-11 | 3 |
annulus fibrosus | 1.43e-08 | 2 |
fibrocartilage | 1.43e-08 | 2 |
annulus fibrosus disci intervertebralis | 1.43e-08 | 2 |
perirenal fat | 3.77e-08 | 2 |
cardiac atrium | 5.63e-08 | 2 |
future cardiac atrium | 5.63e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.