FFCP PHASE1:Mm9::chr14:109313454..109313474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76965|HGNC=|MCL_coexpression_id=1|UniProt=Q810C1,B2RXM1,Q69Z70|association_with_transcript=0bp_to_ENSMUST00000100322,NM_199065,uc007uyc.1_5end|description=CAGE_peak_3_at_Slitrk1_5end|id=chr14:109313454..109313474,-|ontology_enrichment_celltype=CL:0000117!4.19e-15!23;CL:0000337!4.19e-15!23;CL:0000540!3.81e-14!33;CL:0000047!3.81e-14!33;CL:0000031!3.81e-14!33;CL:0000404!3.81e-14!33;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002319!2.16e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-16,23;CL:0000337,2.49e-16,23;CL:0000540,5.35e-13,33;CL:0000047,5.35e-13,33;CL:0000031,5.35e-13,33;CL:0000404,5.35e-13,33;CL:0000393,2.64e-10,39;CL:0000211,2.64e-10,39;CL:0002319,6.14e-09,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0002610,6.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.54e-32!73;UBERON:0005743!1.54e-32!73;UBERON:0002346!3.31e-32!71;UBERON:0003075!3.31e-32!71;UBERON:0007284!3.31e-32!71;UBERON:0000073!5.68e-31!75;UBERON:0001016!5.68e-31!75;UBERON:0001049!9.39e-31!52;UBERON:0005068!9.39e-31!52;UBERON:0006241!9.39e-31!52;UBERON:0007135!9.39e-31!52;UBERON:0000955!2.76e-29!50;UBERON:0006238!2.76e-29!50;UBERON:0000033!2.97e-29!63;UBERON:0002616!1.57e-28!49;UBERON:0004121!1.59e-28!102;UBERON:0000924!1.59e-28!102;UBERON:0006601!1.59e-28!102;UBERON:0003056!2.95e-26!49;UBERON:0003080!2.58e-24!40;UBERON:0002780!2.19e-23!39;UBERON:0001890!2.19e-23!39;UBERON:0006240!2.19e-23!39;UBERON:0002020!6.29e-21!34;UBERON:0000153!6.36e-18!94;UBERON:0002791!4.41e-17!29;UBERON:0003528!4.41e-17!29;UBERON:0001893!4.41e-17!29;UBERON:0007811!1.09e-16!86;UBERON:0000956!1.58e-11!21;UBERON:0001869!1.58e-11!21;UBERON:0000203!1.58e-11!21;UBERON:0002619!5.72e-10!17;UBERON:0002021!8.42e-10!10;UBERON:0000411!8.42e-10!10;UBERON:0001950!8.42e-10!10;UBERON:0001894!3.37e-07!10;UBERON:0006222!3.37e-07!10;UBERON:0002420!7.01e-07!8;UBERON:0007245!7.01e-07!8;UBERON:0010009!7.01e-07!8;UBERON:0010011!7.01e-07!8;UBERON:0000454!7.01e-07!8;UBERON:0003076!7.24e-07!12;UBERON:0003057!7.24e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-52,54;UBERON:0001017,6.34e-49,73;UBERON:0001049,1.32e-48,52;UBERON:0005068,1.32e-48,52;UBERON:0006241,1.32e-48,52;UBERON:0007135,1.32e-48,52;UBERON:0001016,2.48e-47,75;UBERON:0000955,3.45e-40,47;UBERON:0006238,3.45e-40,47;UBERON:0002346,1.25e-39,64;UBERON:0003075,1.25e-39,64;UBERON:0007284,1.25e-39,64;UBERON:0002616,9.53e-39,46;UBERON:0004121,4.39e-35,95;UBERON:0000924,4.39e-35,95;UBERON:0006601,4.39e-35,95;UBERON:0003080,2.30e-34,40;UBERON:0010371,1.73e-33,73;UBERON:0002780,1.32e-32,39;UBERON:0001890,1.32e-32,39;UBERON:0006240,1.32e-32,39;UBERON:0002020,4.90e-31,34;UBERON:0003056,1.48e-26,49;UBERON:0010314,1.80e-24,92;UBERON:0003528,1.39e-23,29;UBERON:0002791,1.39e-23,29;UBERON:0001893,1.39e-23,29;UBERON:0002021,1.25e-18,10;UBERON:0000411,1.25e-18,10;UBERON:0001950,1.25e-18,10;UBERON:0000025,1.03e-16,114;UBERON:0004111,5.78e-15,122;UBERON:0002619,3.15e-14,17;UBERON:0003076,8.80e-14,12;UBERON:0003057,8.80e-14,12;UBERON:0000956,4.01e-13,21;UBERON:0001869,4.01e-13,21;UBERON:0000203,4.01e-13,21;UBERON:0002420,1.36e-12,8;UBERON:0007245,1.36e-12,8;UBERON:0010009,1.36e-12,8;UBERON:0010011,1.36e-12,8;UBERON:0000454,1.36e-12,8;UBERON:0011216,2.53e-12,194;UBERON:0002240,1.07e-10,6;UBERON:0005174,1.07e-10,6;UBERON:0001137,1.07e-10,6;UBERON:0001894,1.29e-09,10;UBERON:0006222,1.29e-09,10;UBERON:0001948,5.45e-09,5;UBERON:0002315,5.45e-09,5;UBERON:0000369,1.57e-08,5;UBERON:0002435,1.57e-08,5;UBERON:0000204,1.57e-08,5;UBERON:0010082,1.57e-08,5;UBERON:0000483,3.36e-08,174;UBERON:0000119,5.39e-08,176;UBERON:0002950,2.10e-07,4;UBERON:0001891,2.10e-07,4;UBERON:0009616,2.10e-07,4;UBERON:0010286,2.10e-07,4;UBERON:0004684,6.17e-07,3;UBERON:0002275,6.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.210324961351382,2.85650984403804,1.98781686856452,0.367472397644862,0.479227355091182,0.919218786610021,4.40463523997555,4.34136949489638,3.5329502648936,3.56092976871523,1.46380229763855,2.6045668527838,2.79182999001381,1.12552522006336,2.75036845998258,2.94628585473668,3.13217697758026,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,2.09446706813455,0,0,0,0,4.04434726393021,2.74500361691176,1.38219787324151,4.34560800480691,1.53429274398198,3.74018480207208,3.56930778749067,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.900310649026746,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.54356918568927,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.88991061978026,3.7507739709505,0,0,0,1.17131623288992,0.861693590931196,0,0.222798674082394,1.41538265394416,0,0.584511715822624,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,1.29358683782755,0.857348140126369,1.95074257006501,1.07021290561242,2.46823530903181,1.522324745573,0,0,0,0,0,0,0,0,0,3.70850604021019,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,4.14292712856459,4.01026859407578,3.09335728218638,4.7955776383945,4.5323633843382,4.72515750162264,3.15224842256954,3.17199686288943,1.03552062350364,0,0.399024873401031,0.682934423016537,0,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.459483751644906,0.952587382566147,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.564656282491984,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0,1.08455788830176,0.964533054905707,1.99848462350357,0.233931608445408,0.429742108096597,0,0,0|short_description=p3@Slitrk1}} | ||
|EntrezGene=76965 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q810C1,B2RXM1,Q69Z70 | |||
|association_with_transcript=0bp_to_ENSMUST00000100322,NM_199065,uc007uyc.1_5end | |||
|description=CAGE_peak_3_at_Slitrk1_5end | |||
|id=chr14:109313454..109313474,- | |||
|ontology_enrichment_celltype=CL:0000117!4.19e-15!23;CL:0000337!4.19e-15!23;CL:0000540!3.81e-14!33;CL:0000047!3.81e-14!33;CL:0000031!3.81e-14!33;CL:0000404!3.81e-14!33;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002319!2.16e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-16,23;CL:0000337,2.49e-16,23;CL:0000540,5.35e-13,33;CL:0000047,5.35e-13,33;CL:0000031,5.35e-13,33;CL:0000404,5.35e-13,33;CL:0000393,2.64e-10,39;CL:0000211,2.64e-10,39;CL:0002319,6.14e-09,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0002610,6.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-32!73;UBERON:0005743!1.54e-32!73;UBERON:0002346!3.31e-32!71;UBERON:0003075!3.31e-32!71;UBERON:0007284!3.31e-32!71;UBERON:0000073!5.68e-31!75;UBERON:0001016!5.68e-31!75;UBERON:0001049!9.39e-31!52;UBERON:0005068!9.39e-31!52;UBERON:0006241!9.39e-31!52;UBERON:0007135!9.39e-31!52;UBERON:0000955!2.76e-29!50;UBERON:0006238!2.76e-29!50;UBERON:0000033!2.97e-29!63;UBERON:0002616!1.57e-28!49;UBERON:0004121!1.59e-28!102;UBERON:0000924!1.59e-28!102;UBERON:0006601!1.59e-28!102;UBERON:0003056!2.95e-26!49;UBERON:0003080!2.58e-24!40;UBERON:0002780!2.19e-23!39;UBERON:0001890!2.19e-23!39;UBERON:0006240!2.19e-23!39;UBERON:0002020!6.29e-21!34;UBERON:0000153!6.36e-18!94;UBERON:0002791!4.41e-17!29;UBERON:0003528!4.41e-17!29;UBERON:0001893!4.41e-17!29;UBERON:0007811!1.09e-16!86;UBERON:0000956!1.58e-11!21;UBERON:0001869!1.58e-11!21;UBERON:0000203!1.58e-11!21;UBERON:0002619!5.72e-10!17;UBERON:0002021!8.42e-10!10;UBERON:0000411!8.42e-10!10;UBERON:0001950!8.42e-10!10;UBERON:0001894!3.37e-07!10;UBERON:0006222!3.37e-07!10;UBERON:0002420!7.01e-07!8;UBERON:0007245!7.01e-07!8;UBERON:0010009!7.01e-07!8;UBERON:0010011!7.01e-07!8;UBERON:0000454!7.01e-07!8;UBERON:0003076!7.24e-07!12;UBERON:0003057!7.24e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-52,54;UBERON:0001017,6.34e-49,73;UBERON:0001049,1.32e-48,52;UBERON:0005068,1.32e-48,52;UBERON:0006241,1.32e-48,52;UBERON:0007135,1.32e-48,52;UBERON:0001016,2.48e-47,75;UBERON:0000955,3.45e-40,47;UBERON:0006238,3.45e-40,47;UBERON:0002346,1.25e-39,64;UBERON:0003075,1.25e-39,64;UBERON:0007284,1.25e-39,64;UBERON:0002616,9.53e-39,46;UBERON:0004121,4.39e-35,95;UBERON:0000924,4.39e-35,95;UBERON:0006601,4.39e-35,95;UBERON:0003080,2.30e-34,40;UBERON:0010371,1.73e-33,73;UBERON:0002780,1.32e-32,39;UBERON:0001890,1.32e-32,39;UBERON:0006240,1.32e-32,39;UBERON:0002020,4.90e-31,34;UBERON:0003056,1.48e-26,49;UBERON:0010314,1.80e-24,92;UBERON:0003528,1.39e-23,29;UBERON:0002791,1.39e-23,29;UBERON:0001893,1.39e-23,29;UBERON:0002021,1.25e-18,10;UBERON:0000411,1.25e-18,10;UBERON:0001950,1.25e-18,10;UBERON:0000025,1.03e-16,114;UBERON:0004111,5.78e-15,122;UBERON:0002619,3.15e-14,17;UBERON:0003076,8.80e-14,12;UBERON:0003057,8.80e-14,12;UBERON:0000956,4.01e-13,21;UBERON:0001869,4.01e-13,21;UBERON:0000203,4.01e-13,21;UBERON:0002420,1.36e-12,8;UBERON:0007245,1.36e-12,8;UBERON:0010009,1.36e-12,8;UBERON:0010011,1.36e-12,8;UBERON:0000454,1.36e-12,8;UBERON:0011216,2.53e-12,194;UBERON:0002240,1.07e-10,6;UBERON:0005174,1.07e-10,6;UBERON:0001137,1.07e-10,6;UBERON:0001894,1.29e-09,10;UBERON:0006222,1.29e-09,10;UBERON:0001948,5.45e-09,5;UBERON:0002315,5.45e-09,5;UBERON:0000369,1.57e-08,5;UBERON:0002435,1.57e-08,5;UBERON:0000204,1.57e-08,5;UBERON:0010082,1.57e-08,5;UBERON:0000483,3.36e-08,174;UBERON:0000119,5.39e-08,176;UBERON:0002950,2.10e-07,4;UBERON:0001891,2.10e-07,4;UBERON:0009616,2.10e-07,4;UBERON:0010286,2.10e-07,4;UBERON:0004684,6.17e-07,3;UBERON:0002275,6.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.210324961351382,2.85650984403804,1.98781686856452,0.367472397644862,0.479227355091182,0.919218786610021,4.40463523997555,4.34136949489638,3.5329502648936,3.56092976871523,1.46380229763855,2.6045668527838,2.79182999001381,1.12552522006336,2.75036845998258,2.94628585473668,3.13217697758026,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,0,0,0,0,0,0.161766849947409,0,0,0,3.51336956413857,2.09446706813455,0,0,0,0,4.04434726393021,2.74500361691176,1.38219787324151,4.34560800480691,1.53429274398198,3.74018480207208,3.56930778749067,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.900310649026746,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,1.54356918568927,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.88991061978026,3.7507739709505,0,0,0,1.17131623288992,0.861693590931196,0,0.222798674082394,1.41538265394416,0,0.584511715822624,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,1.29358683782755,0.857348140126369,1.95074257006501,1.07021290561242,2.46823530903181,1.522324745573,0,0,0,0,0,0,0,0,0,3.70850604021019,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,4.14292712856459,4.01026859407578,3.09335728218638,4.7955776383945,4.5323633843382,4.72515750162264,3.15224842256954,3.17199686288943,1.03552062350364,0,0.399024873401031,0.682934423016537,0,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.459483751644906,0.952587382566147,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.564656282491984,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.29551344712669,0,1.08455788830176,0.964533054905707,1.99848462350357,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p3@Slitrk1 | |||
}} |
Revision as of 01:29, 13 September 2013
Short description: | p3@Slitrk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slitrk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000100322, NM_199065, uc007uyc.1_5end |
EntrezGene: | Slitrk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.49e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-16 | 23 |
neuron | 5.35e-13 | 33 |
neuronal stem cell | 5.35e-13 | 33 |
neuroblast | 5.35e-13 | 33 |
electrically signaling cell | 5.35e-13 | 33 |
electrically responsive cell | 2.64e-10 | 39 |
electrically active cell | 2.64e-10 | 39 |
neural cell | 6.14e-09 | 43 |
ectodermal cell | 1.23e-08 | 44 |
neurectodermal cell | 1.23e-08 | 44 |
raphe nuclei neuron | 6.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.