FFCP PHASE1:Mm9::chr13:83870983..83870999,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83870983..83870999,+|id=chr13:83870983..83870999,+|ontology_enrichment_celltype=CL:0000540!5.83e-22!33;CL:0000047!5.83e-22!33;CL:0000031!5.83e-22!33;CL:0000404!5.83e-22!33;CL:0000393!1.47e-19!39;CL:0000211!1.47e-19!39;CL:0002319!3.00e-18!43;CL:0000221!1.31e-17!44;CL:0000133!1.31e-17!44;CL:0000055!2.77e-16!50;CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000107!6.76e-10!9;CL:0002321!7.30e-09!70;CL:0000220!7.30e-09!70;CL:0002609!1.24e-08!6|ontology_enrichment_celltype_v019_2=CL:0000540,9.20e-19,33;CL:0000047,9.20e-19,33;CL:0000031,9.20e-19,33;CL:0000404,9.20e-19,33;CL:0002609,1.34e-17,6;CL:0000117,3.41e-16,23;CL:0000337,3.41e-16,23;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0002319,7.07e-14,43;CL:0000221,1.65e-13,44;CL:0000133,1.65e-13,44;CL:0002608,2.91e-13,3;CL:0002613,3.52e-12,3;CL:0002321,1.20e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.71e-14!102;UBERON:0000924!4.71e-14!102;UBERON:0006601!4.71e-14!102;UBERON:0000073!5.51e-14!75;UBERON:0001016!5.51e-14!75;UBERON:0001017!6.79e-14!73;UBERON:0005743!6.79e-14!73;UBERON:0002346!6.20e-13!71;UBERON:0003075!6.20e-13!71;UBERON:0007284!6.20e-13!71;UBERON:0002020!4.46e-12!34;UBERON:0003056!8.32e-11!49;UBERON:0002410!6.76e-10!9;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0000010!4.62e-09!11;UBERON:0000033!4.35e-08!63;UBERON:0001049!8.98e-08!52;UBERON:0005068!8.98e-08!52;UBERON:0006241!8.98e-08!52;UBERON:0007135!8.98e-08!52;UBERON:0002420!4.74e-07!8;UBERON:0007245!4.74e-07!8;UBERON:0010009!4.74e-07!8;UBERON:0010011!4.74e-07!8;UBERON:0000454!4.74e-07!8;UBERON:0000970!6.96e-07!9;UBERON:0000019!6.96e-07!9;UBERON:0000047!6.96e-07!9;UBERON:0004088!6.96e-07!9;UBERON:0002104!6.96e-07!9;UBERON:0001456!6.96e-07!9;UBERON:0003072!6.96e-07!9;UBERON:0003071!6.96e-07!9;UBERON:0004128!6.96e-07!9;UBERON:0000369!9.69e-07!5;UBERON:0002435!9.69e-07!5;UBERON:0000204!9.69e-07!5;UBERON:0010082!9.69e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.42e-16,49;UBERON:0004121,3.32e-14,95;UBERON:0000924,3.32e-14,95;UBERON:0006601,3.32e-14,95;UBERON:0002346,8.77e-14,64;UBERON:0003075,8.77e-14,64;UBERON:0007284,8.77e-14,64;UBERON:0000369,1.23e-12,5;UBERON:0002435,1.23e-12,5;UBERON:0000204,1.23e-12,5;UBERON:0010082,1.23e-12,5;UBERON:0003528,2.34e-12,29;UBERON:0002791,2.34e-12,29;UBERON:0001893,2.34e-12,29;UBERON:0000970,8.35e-12,9;UBERON:0000019,8.35e-12,9;UBERON:0000047,8.35e-12,9;UBERON:0010312,8.35e-12,9;UBERON:0004088,8.35e-12,9;UBERON:0002104,8.35e-12,9;UBERON:0001456,8.35e-12,9;UBERON:0003072,8.35e-12,9;UBERON:0004128,8.35e-12,9;UBERON:0003071,8.35e-12,9;UBERON:0010371,9.79e-12,73;UBERON:0002020,2.62e-10,34;UBERON:0001017,6.57e-10,73;UBERON:0001444,1.29e-09,11;UBERON:0001016,1.42e-09,75;UBERON:0001954,1.54e-09,7;UBERON:0003022,1.54e-09,7;UBERON:0002421,1.54e-09,7;UBERON:0000349,1.54e-09,7;UBERON:0002600,1.54e-09,7;UBERON:0000020,8.58e-09,12;UBERON:0001032,8.58e-09,12;UBERON:0004456,8.58e-09,12;UBERON:0002780,8.75e-09,39;UBERON:0001890,8.75e-09,39;UBERON:0006240,8.75e-09,39;UBERON:0010314,1.01e-08,92;UBERON:0003080,1.59e-08,40;UBERON:0000033,4.27e-08,13;UBERON:0005085,4.27e-08,13;UBERON:0002420,5.86e-08,8;UBERON:0007245,5.86e-08,8;UBERON:0010009,5.86e-08,8;UBERON:0010011,5.86e-08,8;UBERON:0000454,5.86e-08,8;UBERON:0002616,3.30e-07,46;UBERON:0000955,5.07e-07,47;UBERON:0006238,5.07e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,2.48855069540346,1.89008313664367,0.841299845405528,0.856952953211411,0.220868540951614,2.08234358665422,1.15014565221884,2.75765635983006,0,0,0,1.58263545276233,1.09785172322892,1.04182674111352,0.279182999001381,0.56276261003168,0,0,0.427115042397309,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.25654352112864,0,0.255715457330331,0,0,0,0,0,0,0.390361328888111,1.37941262660084,2.52086981727489,2.56198190320716,1.76894897793452,2.69038812598185,0.749613796477831,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0.780877488593277,0.861693590931196,1.67278158566786,0.222798674082394,0.283076530788832,0.404810701674894,1.46127928955656,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0.830298780673413,1.19707462020309,0.682934423016537,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.188626341386076,0.187283014939765,0,0.287177344778066,0.476293691283074,0.231768651889711,0,0.824171801606613,0.147198920134397,0,0.532427418478012,0.476872379894642,0,0.188218760830661,0,0.182927972872773,1.05227884575137,0.135804113845862,0,0,0,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0|short_description=p@chr13:83870983..83870999,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83870983..83870999,+ | |||
|id=chr13:83870983..83870999,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.83e-22!33;CL:0000047!5.83e-22!33;CL:0000031!5.83e-22!33;CL:0000404!5.83e-22!33;CL:0000393!1.47e-19!39;CL:0000211!1.47e-19!39;CL:0002319!3.00e-18!43;CL:0000221!1.31e-17!44;CL:0000133!1.31e-17!44;CL:0000055!2.77e-16!50;CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000107!6.76e-10!9;CL:0002321!7.30e-09!70;CL:0000220!7.30e-09!70;CL:0002609!1.24e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.20e-19,33;CL:0000047,9.20e-19,33;CL:0000031,9.20e-19,33;CL:0000404,9.20e-19,33;CL:0002609,1.34e-17,6;CL:0000117,3.41e-16,23;CL:0000337,3.41e-16,23;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0002319,7.07e-14,43;CL:0000221,1.65e-13,44;CL:0000133,1.65e-13,44;CL:0002608,2.91e-13,3;CL:0002613,3.52e-12,3;CL:0002321,1.20e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.71e-14!102;UBERON:0000924!4.71e-14!102;UBERON:0006601!4.71e-14!102;UBERON:0000073!5.51e-14!75;UBERON:0001016!5.51e-14!75;UBERON:0001017!6.79e-14!73;UBERON:0005743!6.79e-14!73;UBERON:0002346!6.20e-13!71;UBERON:0003075!6.20e-13!71;UBERON:0007284!6.20e-13!71;UBERON:0002020!4.46e-12!34;UBERON:0003056!8.32e-11!49;UBERON:0002410!6.76e-10!9;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0000010!4.62e-09!11;UBERON:0000033!4.35e-08!63;UBERON:0001049!8.98e-08!52;UBERON:0005068!8.98e-08!52;UBERON:0006241!8.98e-08!52;UBERON:0007135!8.98e-08!52;UBERON:0002420!4.74e-07!8;UBERON:0007245!4.74e-07!8;UBERON:0010009!4.74e-07!8;UBERON:0010011!4.74e-07!8;UBERON:0000454!4.74e-07!8;UBERON:0000970!6.96e-07!9;UBERON:0000019!6.96e-07!9;UBERON:0000047!6.96e-07!9;UBERON:0004088!6.96e-07!9;UBERON:0002104!6.96e-07!9;UBERON:0001456!6.96e-07!9;UBERON:0003072!6.96e-07!9;UBERON:0003071!6.96e-07!9;UBERON:0004128!6.96e-07!9;UBERON:0000369!9.69e-07!5;UBERON:0002435!9.69e-07!5;UBERON:0000204!9.69e-07!5;UBERON:0010082!9.69e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.42e-16,49;UBERON:0004121,3.32e-14,95;UBERON:0000924,3.32e-14,95;UBERON:0006601,3.32e-14,95;UBERON:0002346,8.77e-14,64;UBERON:0003075,8.77e-14,64;UBERON:0007284,8.77e-14,64;UBERON:0000369,1.23e-12,5;UBERON:0002435,1.23e-12,5;UBERON:0000204,1.23e-12,5;UBERON:0010082,1.23e-12,5;UBERON:0003528,2.34e-12,29;UBERON:0002791,2.34e-12,29;UBERON:0001893,2.34e-12,29;UBERON:0000970,8.35e-12,9;UBERON:0000019,8.35e-12,9;UBERON:0000047,8.35e-12,9;UBERON:0010312,8.35e-12,9;UBERON:0004088,8.35e-12,9;UBERON:0002104,8.35e-12,9;UBERON:0001456,8.35e-12,9;UBERON:0003072,8.35e-12,9;UBERON:0004128,8.35e-12,9;UBERON:0003071,8.35e-12,9;UBERON:0010371,9.79e-12,73;UBERON:0002020,2.62e-10,34;UBERON:0001017,6.57e-10,73;UBERON:0001444,1.29e-09,11;UBERON:0001016,1.42e-09,75;UBERON:0001954,1.54e-09,7;UBERON:0003022,1.54e-09,7;UBERON:0002421,1.54e-09,7;UBERON:0000349,1.54e-09,7;UBERON:0002600,1.54e-09,7;UBERON:0000020,8.58e-09,12;UBERON:0001032,8.58e-09,12;UBERON:0004456,8.58e-09,12;UBERON:0002780,8.75e-09,39;UBERON:0001890,8.75e-09,39;UBERON:0006240,8.75e-09,39;UBERON:0010314,1.01e-08,92;UBERON:0003080,1.59e-08,40;UBERON:0000033,4.27e-08,13;UBERON:0005085,4.27e-08,13;UBERON:0002420,5.86e-08,8;UBERON:0007245,5.86e-08,8;UBERON:0010009,5.86e-08,8;UBERON:0010011,5.86e-08,8;UBERON:0000454,5.86e-08,8;UBERON:0002616,3.30e-07,46;UBERON:0000955,5.07e-07,47;UBERON:0006238,5.07e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,2.48855069540346,1.89008313664367,0.841299845405528,0.856952953211411,0.220868540951614,2.08234358665422,1.15014565221884,2.75765635983006,0,0,0,1.58263545276233,1.09785172322892,1.04182674111352,0.279182999001381,0.56276261003168,0,0,0.427115042397309,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,1.25654352112864,0,0.255715457330331,0,0,0,0,0,0,0.390361328888111,1.37941262660084,2.52086981727489,2.56198190320716,1.76894897793452,2.69038812598185,0.749613796477831,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0.780877488593277,0.861693590931196,1.67278158566786,0.222798674082394,0.283076530788832,0.404810701674894,1.46127928955656,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0.830298780673413,1.19707462020309,0.682934423016537,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0.188626341386076,0.187283014939765,0,0.287177344778066,0.476293691283074,0.231768651889711,0,0.824171801606613,0.147198920134397,0,0.532427418478012,0.476872379894642,0,0.188218760830661,0,0.182927972872773,1.05227884575137,0.135804113845862,0,0,0,0,0,0.385813221962283,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr13:83870983..83870999,+ | |||
}} |
Revision as of 01:12, 13 September 2013
Short description: | p@chr13:83870983..83870999, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83870983..83870999, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.20e-19 | 33 |
neuronal stem cell | 9.20e-19 | 33 |
neuroblast | 9.20e-19 | 33 |
electrically signaling cell | 9.20e-19 | 33 |
neuron of cerebral cortex | 1.34e-17 | 6 |
CNS neuron (sensu Vertebrata) | 3.41e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.41e-16 | 23 |
electrically responsive cell | 1.57e-15 | 39 |
electrically active cell | 1.57e-15 | 39 |
neural cell | 7.07e-14 | 43 |
ectodermal cell | 1.65e-13 | 44 |
neurectodermal cell | 1.65e-13 | 44 |
hippocampal neuron | 2.91e-13 | 3 |
striatum neuron | 3.52e-12 | 3 |
embryonic cell | 1.20e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.