FFCP PHASE1:Mm9::chr13:55585061..55585114,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56320|HGNC=|MCL_coexpression_id=60|UniProt=|association_with_transcript=215bp_to_ENSMUST00000127867_5end|description=CAGE_peak_2_at_Dbn1_5end|id=chr13:55585061..55585114,-|ontology_enrichment_celltype=CL:0000117!4.11e-12!23;CL:0000337!4.11e-12!23;CL:0002319!4.06e-10!43;CL:0000221!1.27e-09!44;CL:0000133!1.27e-09!44;CL:0000055!3.22e-08!50;CL:0000540!2.62e-07!33;CL:0000047!2.62e-07!33;CL:0000031!2.62e-07!33;CL:0000404!2.62e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-17,23;CL:0000337,2.20e-17,23;CL:0000540,7.35e-11,33;CL:0000047,7.35e-11,33;CL:0000031,7.35e-11,33;CL:0000404,7.35e-11,33;CL:0000393,1.40e-08,39;CL:0000211,1.40e-08,39;CL:0002319,1.73e-08,43;CL:0000221,3.34e-08,44;CL:0000133,3.34e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.02e-26!52;UBERON:0005068!1.02e-26!52;UBERON:0006241!1.02e-26!52;UBERON:0007135!1.02e-26!52;UBERON:0001017!1.81e-26!73;UBERON:0005743!1.81e-26!73;UBERON:0000073!8.62e-26!75;UBERON:0001016!8.62e-26!75;UBERON:0000955!2.48e-25!50;UBERON:0006238!2.48e-25!50;UBERON:0002616!1.64e-24!49;UBERON:0002346!1.27e-23!71;UBERON:0003075!1.27e-23!71;UBERON:0007284!1.27e-23!71;UBERON:0002020!3.10e-23!34;UBERON:0000033!9.59e-23!63;UBERON:0003056!5.01e-22!49;UBERON:0003080!8.94e-22!40;UBERON:0002780!5.12e-21!39;UBERON:0001890!5.12e-21!39;UBERON:0006240!5.12e-21!39;UBERON:0004121!3.39e-20!102;UBERON:0000924!3.39e-20!102;UBERON:0006601!3.39e-20!102;UBERON:0002791!9.38e-20!29;UBERON:0003528!9.38e-20!29;UBERON:0001893!9.38e-20!29;UBERON:0000956!4.57e-14!21;UBERON:0001869!4.57e-14!21;UBERON:0000203!4.57e-14!21;UBERON:0002619!2.44e-13!17;UBERON:0007811!3.42e-12!86;UBERON:0002021!6.80e-10!10;UBERON:0000411!6.80e-10!10;UBERON:0001950!6.80e-10!10;UBERON:0000153!1.55e-09!94;UBERON:0002420!6.99e-07!8;UBERON:0007245!6.99e-07!8;UBERON:0010009!6.99e-07!8;UBERON:0010011!6.99e-07!8;UBERON:0000454!6.99e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-37,54;UBERON:0002020,6.01e-35,34;UBERON:0001049,2.53e-34,52;UBERON:0005068,2.53e-34,52;UBERON:0006241,2.53e-34,52;UBERON:0007135,2.53e-34,52;UBERON:0001017,5.73e-34,73;UBERON:0001016,8.52e-33,75;UBERON:0003528,1.20e-27,29;UBERON:0002791,1.20e-27,29;UBERON:0001893,1.20e-27,29;UBERON:0000955,1.51e-27,47;UBERON:0006238,1.51e-27,47;UBERON:0003080,1.34e-26,40;UBERON:0002346,3.24e-26,64;UBERON:0003075,3.24e-26,64;UBERON:0007284,3.24e-26,64;UBERON:0002616,4.60e-26,46;UBERON:0002780,3.74e-25,39;UBERON:0001890,3.74e-25,39;UBERON:0006240,3.74e-25,39;UBERON:0004121,8.73e-24,95;UBERON:0000924,8.73e-24,95;UBERON:0006601,8.73e-24,95;UBERON:0010371,6.85e-22,73;UBERON:0003056,2.15e-20,49;UBERON:0002619,3.63e-20,17;UBERON:0002021,5.83e-20,10;UBERON:0000411,5.83e-20,10;UBERON:0001950,5.83e-20,10;UBERON:0000956,3.69e-18,21;UBERON:0001869,3.69e-18,21;UBERON:0000203,3.69e-18,21;UBERON:0010314,1.48e-15,92;UBERON:0000025,6.76e-11,114;UBERON:0002420,1.16e-10,8;UBERON:0007245,1.16e-10,8;UBERON:0010009,1.16e-10,8;UBERON:0010011,1.16e-10,8;UBERON:0000454,1.16e-10,8;UBERON:0002240,6.02e-10,6;UBERON:0005174,6.02e-10,6;UBERON:0001137,6.02e-10,6;UBERON:0004111,1.25e-09,122;UBERON:0000369,3.49e-09,5;UBERON:0002435,3.49e-09,5;UBERON:0000204,3.49e-09,5;UBERON:0010082,3.49e-09,5;UBERON:0001948,1.71e-08,5;UBERON:0002315,1.71e-08,5;UBERON:0003076,6.00e-08,12;UBERON:0003057,6.00e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0526623567394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.872100625521786,0.659058548203415,0.58328969722285,0.979904951377538,2.87505128729943,0,0,0,0,0.286533439938757,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,4.57041575046086,5.07997644188711,0.61245399607477,1.15014565221884,2.75765635983006,3.30347642998166,4.72443150915195,2.4577045320999,3.03338461779446,3.38504281328916,3.64639359389732,0.837548997004143,7.87867654044352,9.77908785771585,3.24091444021034,3.27454865837937,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,1.82577746171277,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,5.39246301857362,47.1225620903185,6.65968066198181,31.1145533144175,41.1701886301832,11.4283424507758,27.0942909323155,0.101839363850316,0.124406970610093,0,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0,0.612328492361951,0,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,20.3981250107203,2.05809224758569,0,0.528901133327089,0,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.05046120976805,2.93029216480508,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,12.5315313404505,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,1.03486947026204,0.643011105094777,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,72.1526961515764,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,5.55643477899814,40.0361708698433,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9571695207701,59.842280745933,56.7166558305003,47.2596251445141,34.2541259885321,36.2589070747056,45.9015300157628,31.9728054289197,33.5325382648311,28.4768171463501,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0.516919220600519,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,1.01537529470012,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.593175090620871,0.394017929502254,0.409231043169689,0.929621047115796,1.15743966588685,0.749431733813838,0,0.859484216193193,0.382576664137687,0,0.231867835620421|short_description=p2@Dbn1}} | ||
|EntrezGene=56320 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt= | |||
|association_with_transcript=215bp_to_ENSMUST00000127867_5end | |||
|description=CAGE_peak_2_at_Dbn1_5end | |||
|id=chr13:55585061..55585114,- | |||
|ontology_enrichment_celltype=CL:0000117!4.11e-12!23;CL:0000337!4.11e-12!23;CL:0002319!4.06e-10!43;CL:0000221!1.27e-09!44;CL:0000133!1.27e-09!44;CL:0000055!3.22e-08!50;CL:0000540!2.62e-07!33;CL:0000047!2.62e-07!33;CL:0000031!2.62e-07!33;CL:0000404!2.62e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-17,23;CL:0000337,2.20e-17,23;CL:0000540,7.35e-11,33;CL:0000047,7.35e-11,33;CL:0000031,7.35e-11,33;CL:0000404,7.35e-11,33;CL:0000393,1.40e-08,39;CL:0000211,1.40e-08,39;CL:0002319,1.73e-08,43;CL:0000221,3.34e-08,44;CL:0000133,3.34e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-26!52;UBERON:0005068!1.02e-26!52;UBERON:0006241!1.02e-26!52;UBERON:0007135!1.02e-26!52;UBERON:0001017!1.81e-26!73;UBERON:0005743!1.81e-26!73;UBERON:0000073!8.62e-26!75;UBERON:0001016!8.62e-26!75;UBERON:0000955!2.48e-25!50;UBERON:0006238!2.48e-25!50;UBERON:0002616!1.64e-24!49;UBERON:0002346!1.27e-23!71;UBERON:0003075!1.27e-23!71;UBERON:0007284!1.27e-23!71;UBERON:0002020!3.10e-23!34;UBERON:0000033!9.59e-23!63;UBERON:0003056!5.01e-22!49;UBERON:0003080!8.94e-22!40;UBERON:0002780!5.12e-21!39;UBERON:0001890!5.12e-21!39;UBERON:0006240!5.12e-21!39;UBERON:0004121!3.39e-20!102;UBERON:0000924!3.39e-20!102;UBERON:0006601!3.39e-20!102;UBERON:0002791!9.38e-20!29;UBERON:0003528!9.38e-20!29;UBERON:0001893!9.38e-20!29;UBERON:0000956!4.57e-14!21;UBERON:0001869!4.57e-14!21;UBERON:0000203!4.57e-14!21;UBERON:0002619!2.44e-13!17;UBERON:0007811!3.42e-12!86;UBERON:0002021!6.80e-10!10;UBERON:0000411!6.80e-10!10;UBERON:0001950!6.80e-10!10;UBERON:0000153!1.55e-09!94;UBERON:0002420!6.99e-07!8;UBERON:0007245!6.99e-07!8;UBERON:0010009!6.99e-07!8;UBERON:0010011!6.99e-07!8;UBERON:0000454!6.99e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-37,54;UBERON:0002020,6.01e-35,34;UBERON:0001049,2.53e-34,52;UBERON:0005068,2.53e-34,52;UBERON:0006241,2.53e-34,52;UBERON:0007135,2.53e-34,52;UBERON:0001017,5.73e-34,73;UBERON:0001016,8.52e-33,75;UBERON:0003528,1.20e-27,29;UBERON:0002791,1.20e-27,29;UBERON:0001893,1.20e-27,29;UBERON:0000955,1.51e-27,47;UBERON:0006238,1.51e-27,47;UBERON:0003080,1.34e-26,40;UBERON:0002346,3.24e-26,64;UBERON:0003075,3.24e-26,64;UBERON:0007284,3.24e-26,64;UBERON:0002616,4.60e-26,46;UBERON:0002780,3.74e-25,39;UBERON:0001890,3.74e-25,39;UBERON:0006240,3.74e-25,39;UBERON:0004121,8.73e-24,95;UBERON:0000924,8.73e-24,95;UBERON:0006601,8.73e-24,95;UBERON:0010371,6.85e-22,73;UBERON:0003056,2.15e-20,49;UBERON:0002619,3.63e-20,17;UBERON:0002021,5.83e-20,10;UBERON:0000411,5.83e-20,10;UBERON:0001950,5.83e-20,10;UBERON:0000956,3.69e-18,21;UBERON:0001869,3.69e-18,21;UBERON:0000203,3.69e-18,21;UBERON:0010314,1.48e-15,92;UBERON:0000025,6.76e-11,114;UBERON:0002420,1.16e-10,8;UBERON:0007245,1.16e-10,8;UBERON:0010009,1.16e-10,8;UBERON:0010011,1.16e-10,8;UBERON:0000454,1.16e-10,8;UBERON:0002240,6.02e-10,6;UBERON:0005174,6.02e-10,6;UBERON:0001137,6.02e-10,6;UBERON:0004111,1.25e-09,122;UBERON:0000369,3.49e-09,5;UBERON:0002435,3.49e-09,5;UBERON:0000204,3.49e-09,5;UBERON:0010082,3.49e-09,5;UBERON:0001948,1.71e-08,5;UBERON:0002315,1.71e-08,5;UBERON:0003076,6.00e-08,12;UBERON:0003057,6.00e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0526623567394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.872100625521786,0.659058548203415,0.58328969722285,0.979904951377538,2.87505128729943,0,0,0,0,0.286533439938757,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,4.57041575046086,5.07997644188711,0.61245399607477,1.15014565221884,2.75765635983006,3.30347642998166,4.72443150915195,2.4577045320999,3.03338461779446,3.38504281328916,3.64639359389732,0.837548997004143,7.87867654044352,9.77908785771585,3.24091444021034,3.27454865837937,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0.448026887097336,1.82577746171277,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,5.39246301857362,47.1225620903185,6.65968066198181,31.1145533144175,41.1701886301832,11.4283424507758,27.0942909323155,0.101839363850316,0.124406970610093,0,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,0,0.612328492361951,0,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,20.3981250107203,2.05809224758569,0,0.528901133327089,0,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.05046120976805,2.93029216480508,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,12.5315313404505,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,1.03486947026204,0.643011105094777,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,72.1526961515764,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,5.55643477899814,40.0361708698433,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9571695207701,59.842280745933,56.7166558305003,47.2596251445141,34.2541259885321,36.2589070747056,45.9015300157628,31.9728054289197,33.5325382648311,28.4768171463501,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0.516919220600519,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,1.01537529470012,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.593175090620871,0.394017929502254,0.409231043169689,0.929621047115796,1.15743966588685,0.749431733813838,0,0.859484216193193,0.382576664137687,0,0.231867835620421 | |||
|short_description=p2@Dbn1 | |||
}} |
Revision as of 00:51, 13 September 2013
Short description: | p2@Dbn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dbn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 215bp_to_ENSMUST00000127867_5end |
EntrezGene: | Dbn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.20e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-17 | 23 |
neuron | 7.35e-11 | 33 |
neuronal stem cell | 7.35e-11 | 33 |
neuroblast | 7.35e-11 | 33 |
electrically signaling cell | 7.35e-11 | 33 |
electrically responsive cell | 1.40e-08 | 39 |
electrically active cell | 1.40e-08 | 39 |
neural cell | 1.73e-08 | 43 |
ectodermal cell | 3.34e-08 | 44 |
neurectodermal cell | 3.34e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.