FFCP PHASE1:Mm9::chr13:49066571..49066574,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:49066571..49066574,-|id=chr13:49066571..49066574,-|ontology_enrichment_celltype=CL:0002563!5.62e-22!9;CL:0002251!5.62e-22!9;CL:0000239!4.92e-15!6;CL:0000677!4.92e-15!6;CL:0000212!4.92e-15!6;CL:0000584!4.92e-15!6;CL:0000075!9.22e-13!7;CL:0002076!2.14e-12!15;CL:0000066!3.64e-12!25;CL:0000223!6.35e-11!20;CL:0002250!1.62e-08!3|ontology_enrichment_celltype_v019_2=CL:0002563,8.86e-57,9;CL:0002251,8.86e-57,9;CL:0002076,5.62e-34,15;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0000223,6.59e-32,20;CL:0000066,2.14e-31,25;CL:0000075,7.29e-29,7;CL:0002250,5.39e-25,3;CL:0000213,6.33e-09,1;CL:0002078,6.33e-09,1;CL:0000115,6.33e-09,1;CL:0002262,6.33e-09,1;CL:1000398,6.33e-09,1;CL:0002321,1.07e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!1.77e-25!13;UBERON:0000060!1.77e-25!13;UBERON:0001262!1.77e-25!13;UBERON:0004786!1.77e-25!13;UBERON:0000344!3.44e-25!15;UBERON:0003350!5.62e-22!9;UBERON:0004808!5.62e-22!9;UBERON:0001277!5.62e-22!9;UBERON:0004923!1.73e-19!24;UBERON:0000485!1.28e-17!11;UBERON:0005409!4.12e-11!59;UBERON:0000160!2.82e-09!43|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.86e-57,9;UBERON:0004808,8.86e-57,9;UBERON:0001277,8.86e-57,9;UBERON:0000485,2.02e-46,11;UBERON:0001242,3.03e-39,13;UBERON:0001262,3.03e-39,13;UBERON:0004786,3.03e-39,13;UBERON:0000344,5.62e-34,15;UBERON:0004923,4.14e-21,24;UBERON:0000160,3.01e-16,31;UBERON:0003929,2.95e-11,55;UBERON:0005409,1.51e-10,47;UBERON:0000490,2.88e-09,66;UBERON:0002394,6.33e-09,1;UBERON:0001281,6.33e-09,1;UBERON:0000353,6.33e-09,1;UBERON:0003497,6.33e-09,1;UBERON:0003909,6.33e-09,1;UBERON:0003928,6.33e-09,1;UBERON:0003835,6.33e-09,1;UBERON:0003513,6.33e-09,1;UBERON:0001280,6.33e-09,1;UBERON:0004647,6.33e-09,1;UBERON:0002294,6.33e-09,1;UBERON:0001173,6.33e-09,1;UBERON:0004912,6.33e-09,1;UBERON:0005171,6.33e-09,1;UBERON:0005911,7.81e-09,69|phase1_expression=0,4.53668029931169,2.27499619694768,6.65421264875026,10.5188103288733,1.34303417529512,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,2.15380998079537,0.646413698057667,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,8.37669697278696,1.49611180822643,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:49066571..49066574,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:49066571..49066574,- | |||
|id=chr13:49066571..49066574,- | |||
|ontology_enrichment_celltype=CL:0002563!5.62e-22!9;CL:0002251!5.62e-22!9;CL:0000239!4.92e-15!6;CL:0000677!4.92e-15!6;CL:0000212!4.92e-15!6;CL:0000584!4.92e-15!6;CL:0000075!9.22e-13!7;CL:0002076!2.14e-12!15;CL:0000066!3.64e-12!25;CL:0000223!6.35e-11!20;CL:0002250!1.62e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.86e-57,9;CL:0002251,8.86e-57,9;CL:0002076,5.62e-34,15;CL:0000239,1.25e-33,6;CL:0000677,1.25e-33,6;CL:0000584,1.25e-33,6;CL:0000223,6.59e-32,20;CL:0000066,2.14e-31,25;CL:0000075,7.29e-29,7;CL:0002250,5.39e-25,3;CL:0000213,6.33e-09,1;CL:0002078,6.33e-09,1;CL:0000115,6.33e-09,1;CL:0002262,6.33e-09,1;CL:1000398,6.33e-09,1;CL:0002321,1.07e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.77e-25!13;UBERON:0000060!1.77e-25!13;UBERON:0001262!1.77e-25!13;UBERON:0004786!1.77e-25!13;UBERON:0000344!3.44e-25!15;UBERON:0003350!5.62e-22!9;UBERON:0004808!5.62e-22!9;UBERON:0001277!5.62e-22!9;UBERON:0004923!1.73e-19!24;UBERON:0000485!1.28e-17!11;UBERON:0005409!4.12e-11!59;UBERON:0000160!2.82e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.86e-57,9;UBERON:0004808,8.86e-57,9;UBERON:0001277,8.86e-57,9;UBERON:0000485,2.02e-46,11;UBERON:0001242,3.03e-39,13;UBERON:0001262,3.03e-39,13;UBERON:0004786,3.03e-39,13;UBERON:0000344,5.62e-34,15;UBERON:0004923,4.14e-21,24;UBERON:0000160,3.01e-16,31;UBERON:0003929,2.95e-11,55;UBERON:0005409,1.51e-10,47;UBERON:0000490,2.88e-09,66;UBERON:0002394,6.33e-09,1;UBERON:0001281,6.33e-09,1;UBERON:0000353,6.33e-09,1;UBERON:0003497,6.33e-09,1;UBERON:0003909,6.33e-09,1;UBERON:0003928,6.33e-09,1;UBERON:0003835,6.33e-09,1;UBERON:0003513,6.33e-09,1;UBERON:0001280,6.33e-09,1;UBERON:0004647,6.33e-09,1;UBERON:0002294,6.33e-09,1;UBERON:0001173,6.33e-09,1;UBERON:0004912,6.33e-09,1;UBERON:0005171,6.33e-09,1;UBERON:0005911,7.81e-09,69 | |||
|phase1_expression=0,4.53668029931169,2.27499619694768,6.65421264875026,10.5188103288733,1.34303417529512,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,2.15380998079537,0.646413698057667,0.190023419456374,0.252030129759931,0,1.27006134691926,0,0,8.37669697278696,1.49611180822643,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:49066571..49066574,- | |||
}} |
Revision as of 00:41, 13 September 2013
Short description: | p@chr13:49066571..49066574, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49066571..49066574, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.86e-57 | 9 |
epithelial cell of alimentary canal | 8.86e-57 | 9 |
endo-epithelial cell | 5.62e-34 | 15 |
brush border epithelial cell | 1.25e-33 | 6 |
gut absorptive cell | 1.25e-33 | 6 |
enterocyte | 1.25e-33 | 6 |
endodermal cell | 6.59e-32 | 20 |
epithelial cell | 2.14e-31 | 25 |
columnar/cuboidal epithelial cell | 7.29e-29 | 7 |
intestinal crypt stem cell | 5.39e-25 | 3 |
lining cell | 6.33e-09 | 1 |
meso-epithelial cell | 6.33e-09 | 1 |
endothelial cell | 6.33e-09 | 1 |
endothelial cell of sinusoid | 6.33e-09 | 1 |
endothelial cell of hepatic sinusoid | 6.33e-09 | 1 |
embryonic cell | 1.07e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.86e-57 | 9 |
gastrointestinal system epithelium | 8.86e-57 | 9 |
intestinal epithelium | 8.86e-57 | 9 |
simple columnar epithelium | 2.02e-46 | 11 |
intestinal mucosa | 3.03e-39 | 13 |
wall of intestine | 3.03e-39 | 13 |
gastrointestinal system mucosa | 3.03e-39 | 13 |
mucosa | 5.62e-34 | 15 |
organ component layer | 4.14e-21 | 24 |
intestine | 3.01e-16 | 31 |
gut epithelium | 2.95e-11 | 55 |
gastrointestinal system | 1.51e-10 | 47 |
unilaminar epithelium | 2.88e-09 | 66 |
bile duct | 6.33e-09 | 1 |
hepatic sinusoid | 6.33e-09 | 1 |
parenchyma | 6.33e-09 | 1 |
abdomen blood vessel | 6.33e-09 | 1 |
sinusoid | 6.33e-09 | 1 |
digestive system duct | 6.33e-09 | 1 |
abdominal segment blood vessel | 6.33e-09 | 1 |
trunk blood vessel | 6.33e-09 | 1 |
liver parenchyma | 6.33e-09 | 1 |
liver lobule | 6.33e-09 | 1 |
biliary system | 6.33e-09 | 1 |
biliary tree | 6.33e-09 | 1 |
biliary bud | 6.33e-09 | 1 |
hepatic duct | 6.33e-09 | 1 |
endo-epithelium | 7.81e-09 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.