FFCP PHASE1:Hg19::chr3:35680657..35680671,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16968|TSSclassifier=S|UniProt=|association_with_transcript=-409bp_to_ENST00000428373,uc003cfz.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_20_at_ARPP21_5end|id=chr3:35680657..35680671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;1.70e-13;6!CL:0000404;1.70e-13;6|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-17,8;CL:0000540,1.81e-13,6;CL:0000031,1.81e-13,6;CL:0000404,1.81e-13,6|ontology_enrichment_development_v019=UBERON:0006215;8.23e-27;3!UBERON:0010122;2.77e-18;2!CL:0000031;1.70e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.28e-77!57;UBERON:0005068!1.28e-77!57;UBERON:0006241!1.28e-77!57;UBERON:0007135!1.28e-77!57;UBERON:0001017!2.71e-72!82;UBERON:0005743!1.90e-68!86;UBERON:0002616!3.53e-67!59;UBERON:0000073!1.30e-66!94;UBERON:0001016!1.30e-66!94;UBERON:0000955!9.06e-62!69;UBERON:0006238!9.06e-62!69;UBERON:0002780!1.48e-61!41;UBERON:0001890!1.48e-61!41;UBERON:0006240!1.48e-61!41;UBERON:0002020!2.42e-61!34;UBERON:0003528!2.42e-61!34;UBERON:0001893!2.93e-61!34;UBERON:0003080!6.38e-60!42;UBERON:0002791!1.12e-58!33;UBERON:0001869!1.63e-56!32;UBERON:0002346!4.30e-56!90;UBERON:0003075!4.39e-56!86;UBERON:0007284!4.39e-56!86;UBERON:0003056!2.24e-44!61;UBERON:0002619!9.28e-44!22;UBERON:0001950!4.38e-43!20;UBERON:0000956!3.31e-42!25;UBERON:0000203!3.31e-42!25;UBERON:0007023!1.96e-41!115;UBERON:0000153!1.45e-39!129;UBERON:0007811!1.45e-39!129;UBERON:0000924!2.75e-39!173;UBERON:0006601!2.75e-39!173;UBERON:0004121!1.42e-38!169;UBERON:0000033!7.16e-36!123;UBERON:0002308!1.95e-20!9;UBERON:0000125!1.95e-20!9;UBERON:0003076!5.64e-18!15;UBERON:0003057!5.64e-18!15;UBERON:0000200!6.93e-18!6;UBERON:0000025!1.46e-16!194;UBERON:0002420!4.42e-16!9;UBERON:0007245!4.42e-16!9;UBERON:0010009!4.42e-16!9;UBERON:0010011!4.42e-16!9;UBERON:0000454!4.42e-16!9;UBERON:0009663!2.05e-15!7;UBERON:0001872!2.40e-15!5;UBERON:0004733!6.62e-15!12;UBERON:0002028!6.62e-15!12;UBERON:0007277!6.62e-15!12;UBERON:0004732!1.20e-13!13;UBERON:0001871!1.48e-13!7;UBERON:0000369!2.84e-13!4;UBERON:0002435!2.84e-13!4;UBERON:0000204!2.84e-13!4;UBERON:0010082!2.84e-13!4;UBERON:0002298!3.41e-12!8;UBERON:0002680!4.38e-12!9;UBERON:0001895!4.38e-12!9;UBERON:0010092!4.38e-12!9;UBERON:0000483!4.57e-12!309;UBERON:0000064!7.73e-12!219;UBERON:0000119!7.74e-12!312;UBERON:0004111!2.42e-11!241;UBERON:0000477!6.95e-11!286;UBERON:0005383!1.75e-10!3;UBERON:0005382!1.75e-10!3;UBERON:0002021!4.98e-10!5;UBERON:0002771!5.64e-10!3;UBERON:0000475!9.09e-10!365;UBERON:0000988!1.35e-09!3;UBERON:0006331!4.72e-09!3;UBERON:0001873!1.49e-07!2;UBERON:0010122!1.49e-07!2;UBERON:0001870!3.77e-07!2;UBERON:0001897!5.76e-07!2;UBERON:0002148!9.27e-07!2;UBERON:0009662!9.27e-07!2|ontology_enrichment_uberon_v019=UBERON:0005383;2.35e-26;3!UBERON:0005382;2.35e-26;3!UBERON:0000369;6.16e-20;4!UBERON:0002435;6.16e-20;4!UBERON:0000204;6.16e-20;4!UBERON:0002791;1.38e-19;32!UBERON:0001869;1.15e-18;32!UBERON:0001873;2.77e-18;2!UBERON:0002370;5.82e-18;2!UBERON:0005058;5.82e-18;2!UBERON:0009113;5.82e-18;2!UBERON:0003528;2.19e-17;34!UBERON:0002020;2.19e-17;34!UBERON:0001893;1.98e-16;34!UBERON:0000073;7.98e-16;53!UBERON:0002616;7.98e-16;53!UBERON:0002680;1.13e-15;9!UBERON:0001895;1.13e-15;9!UBERON:0002420;1.79e-15;9!UBERON:0007245;1.79e-15;9!UBERON:0010009;1.79e-15;9!UBERON:0010011;1.79e-15;9!UBERON:0000454;1.79e-15;9!UBERON:0002037;1.01e-13;6!UBERON:0002619;2.24e-13;22!UBERON:0000955;4.35e-13;68!UBERON:0002780;2.08e-12;41!UBERON:0001890;2.08e-12;41!UBERON:0001016;7.93e-12;83!UBERON:0004733;8.26e-12;12!UBERON:0002028;8.26e-12;12!UBERON:0000956;8.81e-12;25!UBERON:0000203;8.81e-12;25!UBERON:0001871;9.43e-12;6!UBERON:0009663;1.20e-11;7!UBERON:0004732;6.47e-11;13!UBERON:0001017;1.70e-10;75!UBERON:0001950;2.05e-10;20!UBERON:0001874;7.54e-10;1!UBERON:0003112;7.54e-10;1!UBERON:0011158;7.54e-10;1!UBERON:0003128;7.54e-10;1!UBERON:0001703;7.54e-10;1!UBERON:0002241;7.54e-10;1!UBERON:0000125;3.55e-09;9!UBERON:0002308;3.55e-09;9!UBERON:0000349;8.04e-08;5!UBERON:0004177;9.88e-08;5!UBERON:0005057;9.88e-08;5!UBERON:0000922;7.64e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.81e-31,81;UBERON:0001016,1.19e-27,89;UBERON:0005383,1.74e-26,3;UBERON:0005382,1.74e-26,3;UBERON:0000073,4.88e-25,53;UBERON:0002616,4.88e-25,53;UBERON:0001049,1.32e-23,56;UBERON:0005068,1.32e-23,56;UBERON:0006241,1.32e-23,56;UBERON:0007135,1.32e-23,56;UBERON:0000955,5.19e-22,68;UBERON:0006238,5.19e-22,68;UBERON:0002791,3.64e-20,32;UBERON:0001869,3.64e-20,32;UBERON:0000369,4.91e-20,4;UBERON:0002435,4.91e-20,4;UBERON:0000204,4.91e-20,4;UBERON:0010082,4.91e-20,4;UBERON:0003528,6.09e-19,34;UBERON:0002020,6.09e-19,34;UBERON:0001893,6.09e-19,34;UBERON:0001873,2.65e-18,2;UBERON:0010122,2.65e-18,2;UBERON:0002346,2.88e-17,86;UBERON:0002680,1.15e-15,9;UBERON:0001895,1.15e-15,9;UBERON:0010092,1.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-409bp_to_ENST00000428373,uc003cfz.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_20_at_ARPP21_5end | |||
|id=chr3:35680657..35680671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.70e-13;6!CL:0000404;1.70e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.49e-17,8;CL:0000540,1.81e-13,6;CL:0000031,1.81e-13,6;CL:0000404,1.81e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.23e-27;3!UBERON:0010122;2.77e-18;2!CL:0000031;1.70e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p20@ARPP21 | |||
}} |
Revision as of 23:55, 12 September 2013
Short description: | p20@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_ARPP21_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -409bp_to_ENST00000428373, uc003cfz.2_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.49e-17 | 8 |
neuron | 1.81e-13 | 6 |
neuroblast | 1.81e-13 | 6 |
electrically signaling cell | 1.81e-13 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.