FFCP PHASE1:Hg19::chr3:186575556..186575565,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1639|description=CAGE_peak_at_chr3:186575556..186575565,+|id=chr3:186575556..186575565,+|ontology_enrichment_celltype=CL:0000136!2.58e-33!15;CL:0000325!3.47e-12!39;CL:0002615!2.08e-11!3|ontology_enrichment_celltype_v019=CL:0000136;1.90e-34;13!CL:0002521;2.97e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,6.98e-30,15;CL:0002521,3.16e-07,3|ontology_enrichment_development_v019=UBERON:0010227;1.08e-19;1!UBERON:0004874;2.06e-19;1!UBERON:0006965;2.99e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003978!6.73e-12!3;UBERON:0009751!6.73e-12!3;UBERON:0000946!6.73e-12!3;UBERON:0002523!6.73e-12!3;UBERON:0005983!6.73e-12!3;UBERON:0002165!6.73e-12!3;UBERON:0002062!6.73e-12!3;UBERON:0007280!6.73e-12!3;UBERON:0007023!3.80e-11!115;UBERON:0006122!7.98e-10!1;UBERON:0002079!8.68e-10!1;UBERON:0002146!9.44e-10!1;UBERON:0005623!9.44e-10!1;UBERON:0000989!1.12e-09!1;UBERON:0008811!1.12e-09!1;UBERON:0006258!1.12e-09!1;UBERON:0005876!1.12e-09!1;UBERON:0004874!1.12e-09!1;UBERON:0005418!1.32e-09!1;UBERON:0001389!1.32e-09!1;UBERON:0000026!1.32e-09!1;UBERON:0008784!1.32e-09!1;UBERON:0006058!1.32e-09!1;UBERON:0003663!1.32e-09!1;UBERON:0001383!1.32e-09!1;UBERON:0004256!1.32e-09!1;UBERON:0002529!1.32e-09!1;UBERON:0004708!1.32e-09!1;UBERON:0002101!1.32e-09!1;UBERON:0004709!1.32e-09!1;UBERON:0003661!1.32e-09!1;UBERON:0002471!1.32e-09!1;UBERON:0004357!1.32e-09!1;UBERON:0009872!1.32e-09!1;UBERON:0004347!1.32e-09!1;UBERON:0005420!1.32e-09!1;UBERON:0005732!1.32e-09!1;UBERON:0006057!1.32e-09!1;UBERON:0000978!1.32e-09!1;UBERON:0002103!1.32e-09!1;UBERON:0001665!1.32e-09!1;UBERON:0003823!1.32e-09!1;UBERON:0000154!1.32e-09!1;UBERON:0005733!1.32e-09!1;UBERON:0005730!1.32e-09!1;UBERON:0000996!2.16e-09!1;UBERON:0002135!2.35e-09!1;UBERON:0007029!2.55e-09!1;UBERON:0001154!3.25e-09!1;UBERON:0001153!3.25e-09!1;UBERON:0002046!4.43e-07!5;UBERON:0004117!4.43e-07!5;UBERON:0007689!4.43e-07!5;UBERON:0007123!4.43e-07!5;UBERON:0003091!4.43e-07!5|ontology_enrichment_uberon_v019=UBERON:0002079;1.08e-19;1!UBERON:0002146;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0000989;2.06e-19;1!UBERON:0008811;2.06e-19;1!UBERON:0001389;3.91e-19;1!UBERON:0000026;3.91e-19;1!UBERON:0008784;3.91e-19;1!UBERON:0006058;3.91e-19;1!UBERON:0003663;3.91e-19;1!UBERON:0004256;3.91e-19;1!UBERON:0004708;3.91e-19;1!UBERON:0002101;3.91e-19;1!UBERON:0004709;3.91e-19;1!UBERON:0002529;3.91e-19;1!UBERON:0010538;3.91e-19;1!UBERON:0003661;3.91e-19;1!UBERON:0010890;3.91e-19;1!UBERON:0002471;3.91e-19;1!UBERON:0001383;3.91e-19;1!UBERON:0010758;3.91e-19;1!UBERON:0010707;3.91e-19;1!UBERON:0000978;3.91e-19;1!UBERON:0002103;3.91e-19;1!UBERON:0001665;3.91e-19;1!UBERON:0003823;3.91e-19;1!UBERON:0000154;3.91e-19;1!UBERON:0010709;3.91e-19;1!UBERON:0002081;1.57e-10;2!UBERON:0005090;2.99e-10;2!UBERON:0001630;2.99e-10;2!UBERON:0004151;1.93e-07;3!UBERON:0003978;2.05e-07;3!UBERON:0000946;2.05e-07;3!UBERON:0002190;2.97e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.08e-19,1;UBERON:0002146,1.30e-19,1;UBERON:0005623,1.30e-19,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0005418,2.71e-19,1;UBERON:0001389,2.71e-19,1;UBERON:0000026,2.71e-19,1;UBERON:0008784,2.71e-19,1;UBERON:0006058,2.71e-19,1;UBERON:0003663,2.71e-19,1;UBERON:0004256,2.71e-19,1;UBERON:0004708,2.71e-19,1;UBERON:0002101,2.71e-19,1;UBERON:0004709,2.71e-19,1;UBERON:0002529,2.71e-19,1;UBERON:0010538,2.71e-19,1;UBERON:0003661,2.71e-19,1;UBERON:0010890,2.71e-19,1;UBERON:0002471,2.71e-19,1;UBERON:0001383,2.71e-19,1;UBERON:0004357,2.71e-19,1;UBERON:0004347,2.71e-19,1;UBERON:0005420,2.71e-19,1;UBERON:0005732,2.71e-19,1;UBERON:0010758,2.71e-19,1;UBERON:0010707,2.71e-19,1;UBERON:0000978,2.71e-19,1;UBERON:0002103,2.71e-19,1;UBERON:0001665,2.71e-19,1;UBERON:0003823,2.71e-19,1;UBERON:0000154,2.71e-19,1;UBERON:0010709,2.71e-19,1;UBERON:0005733,2.71e-19,1;UBERON:0005730,2.71e-19,1;UBERON:0002081,1.57e-10,2;UBERON:0010227,1.57e-10,2;UBERON:0005090,2.49e-10,2;UBERON:0001630,2.49e-10,2;UBERON:0004151,1.93e-07,3;UBERON:0003978,2.05e-07,3;UBERON:0009751,2.05e-07,3;UBERON:0000946,2.05e-07,3;UBERON:0002523,2.05e-07,3;UBERON:0005983,2.05e-07,3;UBERON:0002165,2.05e-07,3;UBERON:0002062,2.05e-07,3;UBERON:0007280,2.05e-07,3;UBERON:0002190,3.16e-07,3|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1639 | |||
|description=CAGE_peak_at_chr3:186575556..186575565,+ | |||
|id=chr3:186575556..186575565,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.58e-33!15;CL:0000325!3.47e-12!39;CL:0002615!2.08e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.90e-34;13!CL:0002521;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.98e-30,15;CL:0002521,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.08e-19;1!UBERON:0004874;2.06e-19;1!UBERON:0006965;2.99e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!6.73e-12!3;UBERON:0009751!6.73e-12!3;UBERON:0000946!6.73e-12!3;UBERON:0002523!6.73e-12!3;UBERON:0005983!6.73e-12!3;UBERON:0002165!6.73e-12!3;UBERON:0002062!6.73e-12!3;UBERON:0007280!6.73e-12!3;UBERON:0007023!3.80e-11!115;UBERON:0006122!7.98e-10!1;UBERON:0002079!8.68e-10!1;UBERON:0002146!9.44e-10!1;UBERON:0005623!9.44e-10!1;UBERON:0000989!1.12e-09!1;UBERON:0008811!1.12e-09!1;UBERON:0006258!1.12e-09!1;UBERON:0005876!1.12e-09!1;UBERON:0004874!1.12e-09!1;UBERON:0005418!1.32e-09!1;UBERON:0001389!1.32e-09!1;UBERON:0000026!1.32e-09!1;UBERON:0008784!1.32e-09!1;UBERON:0006058!1.32e-09!1;UBERON:0003663!1.32e-09!1;UBERON:0001383!1.32e-09!1;UBERON:0004256!1.32e-09!1;UBERON:0002529!1.32e-09!1;UBERON:0004708!1.32e-09!1;UBERON:0002101!1.32e-09!1;UBERON:0004709!1.32e-09!1;UBERON:0003661!1.32e-09!1;UBERON:0002471!1.32e-09!1;UBERON:0004357!1.32e-09!1;UBERON:0009872!1.32e-09!1;UBERON:0004347!1.32e-09!1;UBERON:0005420!1.32e-09!1;UBERON:0005732!1.32e-09!1;UBERON:0006057!1.32e-09!1;UBERON:0000978!1.32e-09!1;UBERON:0002103!1.32e-09!1;UBERON:0001665!1.32e-09!1;UBERON:0003823!1.32e-09!1;UBERON:0000154!1.32e-09!1;UBERON:0005733!1.32e-09!1;UBERON:0005730!1.32e-09!1;UBERON:0000996!2.16e-09!1;UBERON:0002135!2.35e-09!1;UBERON:0007029!2.55e-09!1;UBERON:0001154!3.25e-09!1;UBERON:0001153!3.25e-09!1;UBERON:0002046!4.43e-07!5;UBERON:0004117!4.43e-07!5;UBERON:0007689!4.43e-07!5;UBERON:0007123!4.43e-07!5;UBERON:0003091!4.43e-07!5 | |||
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|short_description=p@chr3:186575556..186575565,+ | |||
}} |
Revision as of 23:10, 12 September 2013
Short description: | p@chr3:186575556..186575565, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:186575556..186575565, + |
Coexpression cluster: | C1639_breast_small_left_adipose_cervix_thyroid_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.98e-30 | 15 |
subcutaneous fat cell | 3.16e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.