FFCP PHASE1:Mm9::chr12:114660842..114660852,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=372|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114660842..114660852,-|id=chr12:114660842..114660852,-|ontology_enrichment_celltype=CL:0002031!1.50e-09!25;CL:0000553!2.62e-09!6;CL:0000556!2.62e-09!6;CL:0000988!1.45e-08!32;CL:0002032!1.45e-08!32;CL:0000037!1.45e-08!32;CL:0000566!1.45e-08!32;CL:0000837!1.45e-08!32;CL:0000838!6.64e-08!12;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000084!9.18e-07!11;CL:0000827!9.18e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.35e-22,6;CL:0000556,1.35e-22,6;CL:0000050,4.81e-15,9;CL:0002031,1.04e-12,25;CL:0000839,2.23e-10,13;CL:0000988,9.99e-10,32;CL:0002032,9.99e-10,32;CL:0000037,9.99e-10,32;CL:0000837,9.99e-10,32;CL:0000763,2.11e-08,16;CL:0002027,5.01e-08,3;CL:0002006,5.01e-08,3;CL:0002024,5.01e-08,3;CL:0000049,4.81e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.39e-17!48;UBERON:0002390!2.83e-14!45;UBERON:0003061!2.83e-14!45;UBERON:0004177!8.15e-14!29;UBERON:0002405!1.08e-11!70;UBERON:0003408!1.78e-10!24;UBERON:0002370!1.46e-09!23;UBERON:0000974!1.46e-09!23;UBERON:0004807!1.46e-09!23;UBERON:0005058!1.46e-09!23;UBERON:0003351!1.46e-09!23;UBERON:0009113!1.46e-09!23;UBERON:0003295!1.46e-09!23;UBERON:0009722!1.46e-09!23;UBERON:0005562!1.46e-09!23;UBERON:0007690!1.46e-09!23;UBERON:0001004!5.05e-09!42;UBERON:0006562!5.53e-09!24;UBERON:0001557!5.53e-09!24;UBERON:0001042!5.53e-09!24;UBERON:0008814!5.53e-09!24;UBERON:0009145!5.53e-09!24;UBERON:0003081!1.64e-08!88;UBERON:0000065!2.74e-08!41;UBERON:0005057!1.10e-07!51;UBERON:0000072!1.61e-07!27;UBERON:0000063!3.05e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-19,48;UBERON:0002405,1.24e-19,48;UBERON:0002465,3.53e-16,3;UBERON:0002106,2.42e-14,6;UBERON:0004457,2.42e-14,6;UBERON:0000042,2.42e-14,6;UBERON:0004854,2.42e-14,6;UBERON:0009034,2.42e-14,6;UBERON:0002095,2.42e-14,6;UBERON:0004782,2.42e-14,6;UBERON:0003281,2.42e-14,6;UBERON:0009664,2.42e-14,6;UBERON:0002296,2.42e-14,6;UBERON:0005602,2.42e-14,6;UBERON:0001179,2.42e-14,6;UBERON:0006293,2.42e-14,6;UBERON:0002390,9.94e-13,45;UBERON:0003061,9.94e-13,45;UBERON:0001962,5.49e-11,2;UBERON:0001961,5.49e-11,2;UBERON:0001744,5.49e-11,2;UBERON:0003887,1.10e-08,10;UBERON:0002371,2.11e-08,16;UBERON:0004923,2.08e-07,24;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0.684802919724823,0.0874204024189974,3.99731714178795,5.4668322195253,0.699561878128147,8.67520954735154,11.1062691220648,5.94145512517242,0.0850432901510698,1.48936426801328,0.261199789138935,1.27993938234725,2.52350209173887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70460860596304,1.45072428402269,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,9.06282592765101,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0.318909537314974,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0,0,14.3531539870196,0,0.185194527369712,1.69531611304222,3.96413260390973,2.74533807847827,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.360586348559907,1.03382669022204,0.201932899896295,0.609654453239999,0.403304740547362,0.38983152295901,0.481059208201647,0.935015217452552,0,0,0,0,0.579568782096571,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr12:114660842..114660852,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114660842..114660852,- | |||
|id=chr12:114660842..114660852,- | |||
|ontology_enrichment_celltype=CL:0002031!1.50e-09!25;CL:0000553!2.62e-09!6;CL:0000556!2.62e-09!6;CL:0000988!1.45e-08!32;CL:0002032!1.45e-08!32;CL:0000037!1.45e-08!32;CL:0000566!1.45e-08!32;CL:0000837!1.45e-08!32;CL:0000838!6.64e-08!12;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000084!9.18e-07!11;CL:0000827!9.18e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.35e-22,6;CL:0000556,1.35e-22,6;CL:0000050,4.81e-15,9;CL:0002031,1.04e-12,25;CL:0000839,2.23e-10,13;CL:0000988,9.99e-10,32;CL:0002032,9.99e-10,32;CL:0000037,9.99e-10,32;CL:0000837,9.99e-10,32;CL:0000763,2.11e-08,16;CL:0002027,5.01e-08,3;CL:0002006,5.01e-08,3;CL:0002024,5.01e-08,3;CL:0000049,4.81e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.39e-17!48;UBERON:0002390!2.83e-14!45;UBERON:0003061!2.83e-14!45;UBERON:0004177!8.15e-14!29;UBERON:0002405!1.08e-11!70;UBERON:0003408!1.78e-10!24;UBERON:0002370!1.46e-09!23;UBERON:0000974!1.46e-09!23;UBERON:0004807!1.46e-09!23;UBERON:0005058!1.46e-09!23;UBERON:0003351!1.46e-09!23;UBERON:0009113!1.46e-09!23;UBERON:0003295!1.46e-09!23;UBERON:0009722!1.46e-09!23;UBERON:0005562!1.46e-09!23;UBERON:0007690!1.46e-09!23;UBERON:0001004!5.05e-09!42;UBERON:0006562!5.53e-09!24;UBERON:0001557!5.53e-09!24;UBERON:0001042!5.53e-09!24;UBERON:0008814!5.53e-09!24;UBERON:0009145!5.53e-09!24;UBERON:0003081!1.64e-08!88;UBERON:0000065!2.74e-08!41;UBERON:0005057!1.10e-07!51;UBERON:0000072!1.61e-07!27;UBERON:0000063!3.05e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-19,48;UBERON:0002405,1.24e-19,48;UBERON:0002465,3.53e-16,3;UBERON:0002106,2.42e-14,6;UBERON:0004457,2.42e-14,6;UBERON:0000042,2.42e-14,6;UBERON:0004854,2.42e-14,6;UBERON:0009034,2.42e-14,6;UBERON:0002095,2.42e-14,6;UBERON:0004782,2.42e-14,6;UBERON:0003281,2.42e-14,6;UBERON:0009664,2.42e-14,6;UBERON:0002296,2.42e-14,6;UBERON:0005602,2.42e-14,6;UBERON:0001179,2.42e-14,6;UBERON:0006293,2.42e-14,6;UBERON:0002390,9.94e-13,45;UBERON:0003061,9.94e-13,45;UBERON:0001962,5.49e-11,2;UBERON:0001961,5.49e-11,2;UBERON:0001744,5.49e-11,2;UBERON:0003887,1.10e-08,10;UBERON:0002371,2.11e-08,16;UBERON:0004923,2.08e-07,24;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0.684802919724823,0.0874204024189974,3.99731714178795,5.4668322195253,0.699561878128147,8.67520954735154,11.1062691220648,5.94145512517242,0.0850432901510698,1.48936426801328,0.261199789138935,1.27993938234725,2.52350209173887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70460860596304,1.45072428402269,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,9.06282592765101,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.44292937929755,0.318909537314974,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0,0,14.3531539870196,0,0.185194527369712,1.69531611304222,3.96413260390973,2.74533807847827,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.360586348559907,1.03382669022204,0.201932899896295,0.609654453239999,0.403304740547362,0.38983152295901,0.481059208201647,0.935015217452552,0,0,0,0,0.579568782096571,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:114660842..114660852,- | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p@chr12:114660842..114660852, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660842..114660852, - |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.35e-22 | 6 |
megakaryocyte | 1.35e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 4.81e-15 | 9 |
hematopoietic lineage restricted progenitor cell | 1.04e-12 | 25 |
myeloid lineage restricted progenitor cell | 2.23e-10 | 13 |
hematopoietic cell | 9.99e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.99e-10 | 32 |
hematopoietic stem cell | 9.99e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.99e-10 | 32 |
myeloid cell | 2.11e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 5.01e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.01e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.01e-08 | 3 |
common myeloid progenitor | 4.81e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.24e-19 | 48 |
immune system | 1.24e-19 | 48 |
lymphoid system | 3.53e-16 | 3 |
spleen | 2.42e-14 | 6 |
cavity lining | 2.42e-14 | 6 |
serous membrane | 2.42e-14 | 6 |
gastrointestinal system mesentery | 2.42e-14 | 6 |
stomach region | 2.42e-14 | 6 |
mesentery | 2.42e-14 | 6 |
gastrointestinal system serosa | 2.42e-14 | 6 |
mesentery of stomach | 2.42e-14 | 6 |
gut mesentery | 2.42e-14 | 6 |
dorsal mesentery | 2.42e-14 | 6 |
dorsal mesogastrium | 2.42e-14 | 6 |
peritoneal cavity | 2.42e-14 | 6 |
spleen primordium | 2.42e-14 | 6 |
hematopoietic system | 9.94e-13 | 45 |
blood island | 9.94e-13 | 45 |
gut-associated lymphoid tissue | 5.49e-11 | 2 |
mucosa-associated lymphoid tissue | 5.49e-11 | 2 |
lymphoid tissue | 5.49e-11 | 2 |
intraembryonic coelom | 1.10e-08 | 10 |
bone marrow | 2.11e-08 | 16 |
organ component layer | 2.08e-07 | 24 |
lymph node | 7.38e-07 | 1 |
axillary lymph node | 7.38e-07 | 1 |
peripheral lymph node | 7.38e-07 | 1 |
shoulder | 7.38e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.