FFCP PHASE1:Hg19::chr3:154741907..154741918,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4311|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7154|TSSclassifier=S|UniProt=P08473|association_with_transcript=0bp_to_ENST00000492661,uc010hvr.1_5end|description=CAGE_peak_25_at_MME_5end|id=chr3:154741907..154741918,+|ontology_enrichment_celltype=CL:0002620!1.62e-10!23;CL:0002541!4.58e-10!3;CL:0002580!5.35e-09!3;CL:0002504!2.02e-08!3;CL:1000279!2.02e-08!3;CL:1000280!2.02e-08!3;CL:0000057!1.09e-07!75;CL:0002588!1.90e-07!2;CL:0000055!1.94e-07!180;CL:0002617!3.79e-07!2|ontology_enrichment_celltype_v019=CL:0002588;8.04e-30;2!CL:0002561;2.22e-29;2!CL:0002541;5.91e-20;3!CL:0002559;2.25e-12;5!CL:0002617;2.48e-08;2!CL:0000349;2.65e-07;19!CL:0000362;2.86e-07;9|ontology_enrichment_celltype_v019_2=CL:0002588,8.05e-30,2;CL:0002561,2.22e-29,2;CL:0002541,7.16e-20,3;CL:0002559,2.25e-12,5;CL:0002617,2.31e-08,2;CL:0000362,2.86e-07,9;CL:0000349,2.95e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.16e-09!5;DOID:450!1.16e-09!5;DOID:66!1.16e-09!5;DOID:423!1.16e-09!5;DOID:0080000!1.16e-09!5;DOID:11722!1.16e-09!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003124!1.17e-10!7;UBERON:0000476!4.58e-10!3;UBERON:0000920!4.58e-10!3;UBERON:0000310!5.04e-07!10|ontology_enrichment_uberon_v019=UBERON:0005933;2.22e-29;2!UBERON:0005942;2.22e-29;2!UBERON:0005932;2.22e-29;2!UBERON:0003124;5.91e-20;3!UBERON:0000920;5.91e-20;3!UBERON:0002066;1.50e-12;5!UBERON:0002073;2.25e-12;5!UBERON:0001638;2.29e-07;9!UBERON:0010260;2.29e-07;9!UBERON:0003920;2.29e-07;9!UBERON:0004582;2.29e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0005933,2.22e-29,2;UBERON:0005942,2.22e-29,2;UBERON:0005932,2.22e-29,2;UBERON:0000920,7.16e-20,3;UBERON:0002066,1.50e-12,5;UBERON:0002073,2.25e-12,5;UBERON:0005086,2.25e-12,5;UBERON:0003124,4.57e-09,7;UBERON:0002097,1.26e-08,41;UBERON:0002199,1.11e-07,46;UBERON:0002416,1.11e-07,46;UBERON:0001638,2.29e-07,9;UBERON:0010260,2.29e-07,9;UBERON:0003920,2.29e-07,9;UBERON:0004582,2.29e-07,9|phase1_expression=0.726713517082227,1.49870366723688,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,2.56268866582281,0.423863802319124,0.300091096084402,0.412210116953756,1.54584324027377,1.11670113798954,0,0.194874010322397,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90445975197093,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.788512075169673,0.702848489956279,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0.153461973288062,0.280660094433074,0.512556597022804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,2.86822704408103,7.95817232206281,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99733075704478,0,0.108647371922008,1.27600463892768,0.915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,1.82315973706429,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p25@MME}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=S | |||
|UniProt=P08473 | |||
|association_with_transcript=0bp_to_ENST00000492661,uc010hvr.1_5end | |||
|description=CAGE_peak_25_at_MME_5end | |||
|id=chr3:154741907..154741918,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.62e-10!23;CL:0002541!4.58e-10!3;CL:0002580!5.35e-09!3;CL:0002504!2.02e-08!3;CL:1000279!2.02e-08!3;CL:1000280!2.02e-08!3;CL:0000057!1.09e-07!75;CL:0002588!1.90e-07!2;CL:0000055!1.94e-07!180;CL:0002617!3.79e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002588;8.04e-30;2!CL:0002561;2.22e-29;2!CL:0002541;5.91e-20;3!CL:0002559;2.25e-12;5!CL:0002617;2.48e-08;2!CL:0000349;2.65e-07;19!CL:0000362;2.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,8.05e-30,2;CL:0002561,2.22e-29,2;CL:0002541,7.16e-20,3;CL:0002559,2.25e-12,5;CL:0002617,2.31e-08,2;CL:0000362,2.86e-07,9;CL:0000349,2.95e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.16e-09!5;DOID:450!1.16e-09!5;DOID:66!1.16e-09!5;DOID:423!1.16e-09!5;DOID:0080000!1.16e-09!5;DOID:11722!1.16e-09!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.17e-10!7;UBERON:0000476!4.58e-10!3;UBERON:0000920!4.58e-10!3;UBERON:0000310!5.04e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.22e-29;2!UBERON:0005942;2.22e-29;2!UBERON:0005932;2.22e-29;2!UBERON:0003124;5.91e-20;3!UBERON:0000920;5.91e-20;3!UBERON:0002066;1.50e-12;5!UBERON:0002073;2.25e-12;5!UBERON:0001638;2.29e-07;9!UBERON:0010260;2.29e-07;9!UBERON:0003920;2.29e-07;9!UBERON:0004582;2.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,2.22e-29,2;UBERON:0005942,2.22e-29,2;UBERON:0005932,2.22e-29,2;UBERON:0000920,7.16e-20,3;UBERON:0002066,1.50e-12,5;UBERON:0002073,2.25e-12,5;UBERON:0005086,2.25e-12,5;UBERON:0003124,4.57e-09,7;UBERON:0002097,1.26e-08,41;UBERON:0002199,1.11e-07,46;UBERON:0002416,1.11e-07,46;UBERON:0001638,2.29e-07,9;UBERON:0010260,2.29e-07,9;UBERON:0003920,2.29e-07,9;UBERON:0004582,2.29e-07,9 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,2.56268866582281,0.423863802319124,0.300091096084402,0.412210116953756,1.54584324027377,1.11670113798954,0,0.194874010322397,0,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90445975197093,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.788512075169673,0.702848489956279,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0.153461973288062,0.280660094433074,0.512556597022804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,2.86822704408103,7.95817232206281,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99733075704478,0,0.108647371922008,1.27600463892768,0.915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,1.82315973706429,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p25@MME | |||
}} |
Revision as of 22:16, 12 September 2013
Short description: | p25@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_MME_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000492661, uc010hvr.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 8.05e-30 | 2 |
outer root sheath cell | 2.22e-29 | 2 |
chorionic membrane mesenchymal stem cell | 7.16e-20 | 3 |
hair follicle cell | 2.25e-12 | 5 |
adipocyte of breast | 2.31e-08 | 2 |
epidermal cell | 2.86e-07 | 9 |
extraembryonic cell | 2.95e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 2.22e-29 | 2 |
hair outer root sheath | 2.22e-29 | 2 |
bulb of hair follicle | 2.22e-29 | 2 |
egg chorion | 7.16e-20 | 3 |
umbilical vein | 1.50e-12 | 5 |
hair follicle | 2.25e-12 | 5 |
hair follicle placode | 2.25e-12 | 5 |
chorion | 4.57e-09 | 7 |
skin of body | 1.26e-08 | 41 |
integument | 1.11e-07 | 46 |
integumental system | 1.11e-07 | 46 |
vein | 2.29e-07 | 9 |
umbilical blood vessel | 2.29e-07 | 9 |
venous blood vessel | 2.29e-07 | 9 |
venous system | 2.29e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.