FFCP PHASE1:Mm9::chr12:109149819..109149825,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=482|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:109149819..109149825,-|id=chr12:109149819..109149825,-|ontology_enrichment_celltype=CL:0000117!8.89e-14!23;CL:0000337!8.89e-14!23;CL:0000540!4.36e-08!33;CL:0000047!4.36e-08!33;CL:0000031!4.36e-08!33;CL:0000404!4.36e-08!33;CL:0002609!3.44e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,7.54e-19,6;CL:0000117,1.52e-13,23;CL:0000337,1.52e-13,23;CL:0002608,2.94e-10,3;CL:0000120,7.43e-09,3;CL:0000540,9.03e-09,33;CL:0000047,9.03e-09,33;CL:0000031,9.03e-09,33;CL:0000404,9.03e-09,33;CL:0000393,4.32e-07,39;CL:0000211,4.32e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.78e-14!94;UBERON:0007811!1.45e-13!86;UBERON:0002020!2.47e-13!34;UBERON:0001049!3.88e-11!52;UBERON:0005068!3.88e-11!52;UBERON:0006241!3.88e-11!52;UBERON:0007135!3.88e-11!52;UBERON:0000064!1.92e-10!99;UBERON:0002791!2.61e-10!29;UBERON:0003528!2.61e-10!29;UBERON:0001893!2.61e-10!29;UBERON:0003080!3.24e-10!40;UBERON:0002780!4.79e-10!39;UBERON:0001890!4.79e-10!39;UBERON:0006240!4.79e-10!39;UBERON:0006562!9.11e-10!24;UBERON:0001557!9.11e-10!24;UBERON:0001042!9.11e-10!24;UBERON:0008814!9.11e-10!24;UBERON:0009145!9.11e-10!24;UBERON:0002370!1.79e-09!23;UBERON:0000974!1.79e-09!23;UBERON:0004807!1.79e-09!23;UBERON:0005058!1.79e-09!23;UBERON:0003351!1.79e-09!23;UBERON:0009113!1.79e-09!23;UBERON:0003295!1.79e-09!23;UBERON:0009722!1.79e-09!23;UBERON:0005562!1.79e-09!23;UBERON:0007690!1.79e-09!23;UBERON:0003408!8.52e-09!24;UBERON:0002616!1.76e-08!49;UBERON:0000955!4.14e-08!50;UBERON:0006238!4.14e-08!50;UBERON:0003056!4.78e-08!49;UBERON:0001017!6.47e-08!73;UBERON:0005743!6.47e-08!73;UBERON:0000072!6.60e-08!27;UBERON:0000073!2.25e-07!75;UBERON:0001016!2.25e-07!75;UBERON:0004177!4.96e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.04e-18,23;UBERON:0000974,1.04e-18,23;UBERON:0004807,1.04e-18,23;UBERON:0005058,1.04e-18,23;UBERON:0003351,1.04e-18,23;UBERON:0009113,1.04e-18,23;UBERON:0003295,1.04e-18,23;UBERON:0009722,1.04e-18,23;UBERON:0005562,1.04e-18,23;UBERON:0007690,1.04e-18,23;UBERON:0006562,8.15e-18,24;UBERON:0003408,8.15e-18,24;UBERON:0001557,8.15e-18,24;UBERON:0001042,8.15e-18,24;UBERON:0008814,8.15e-18,24;UBERON:0009145,8.15e-18,24;UBERON:0000072,1.58e-15,27;UBERON:0004177,2.87e-14,29;UBERON:0005057,2.87e-14,29;UBERON:0000153,9.29e-12,43;UBERON:0000077,2.36e-11,35;UBERON:0007811,5.79e-11,36;UBERON:0003528,2.91e-10,29;UBERON:0002791,2.91e-10,29;UBERON:0001893,2.91e-10,29;UBERON:0002020,5.19e-10,34;UBERON:0000956,5.91e-10,21;UBERON:0001869,5.91e-10,21;UBERON:0000203,5.91e-10,21;UBERON:0000065,2.68e-09,41;UBERON:0001004,5.16e-09,42;UBERON:0002390,3.10e-08,45;UBERON:0003061,3.10e-08,45;UBERON:0002193,1.48e-07,48;UBERON:0002405,1.48e-07,48;UBERON:0001954,3.69e-07,7;UBERON:0003022,3.69e-07,7;UBERON:0002421,3.69e-07,7;UBERON:0000349,3.69e-07,7;UBERON:0002600,3.69e-07,7;UBERON:0002780,4.46e-07,39;UBERON:0001890,4.46e-07,39;UBERON:0006240,4.46e-07,39;UBERON:0003080,7.58e-07,40|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,1.34437519656986,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.11068836925433,8.10035629990144,6.94072372459561,0.571301968807607,0.441737081903227,6.36952155917761,4.60058260887535,5.51531271966013,0,0.255374676170375,0,0.791317726381163,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,1.17851434189467,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,4.02093926761166,0.173824320192276,0.255715457330331,0.20778804455956,0.811206315338788,0,0,0,0,0.520481771850815,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,1.11218899690239,0,1.23469281844766,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,1.3377599609307,0,0,0.853153002140936,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0.32977250588296,0.322928853391811,0.301564624640779,1.19372344003136,0.492422699235184,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=482 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:109149819..109149825,- | |||
|id=chr12:109149819..109149825,- | |||
|ontology_enrichment_celltype=CL:0000117!8.89e-14!23;CL:0000337!8.89e-14!23;CL:0000540!4.36e-08!33;CL:0000047!4.36e-08!33;CL:0000031!4.36e-08!33;CL:0000404!4.36e-08!33;CL:0002609!3.44e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,7.54e-19,6;CL:0000117,1.52e-13,23;CL:0000337,1.52e-13,23;CL:0002608,2.94e-10,3;CL:0000120,7.43e-09,3;CL:0000540,9.03e-09,33;CL:0000047,9.03e-09,33;CL:0000031,9.03e-09,33;CL:0000404,9.03e-09,33;CL:0000393,4.32e-07,39;CL:0000211,4.32e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.78e-14!94;UBERON:0007811!1.45e-13!86;UBERON:0002020!2.47e-13!34;UBERON:0001049!3.88e-11!52;UBERON:0005068!3.88e-11!52;UBERON:0006241!3.88e-11!52;UBERON:0007135!3.88e-11!52;UBERON:0000064!1.92e-10!99;UBERON:0002791!2.61e-10!29;UBERON:0003528!2.61e-10!29;UBERON:0001893!2.61e-10!29;UBERON:0003080!3.24e-10!40;UBERON:0002780!4.79e-10!39;UBERON:0001890!4.79e-10!39;UBERON:0006240!4.79e-10!39;UBERON:0006562!9.11e-10!24;UBERON:0001557!9.11e-10!24;UBERON:0001042!9.11e-10!24;UBERON:0008814!9.11e-10!24;UBERON:0009145!9.11e-10!24;UBERON:0002370!1.79e-09!23;UBERON:0000974!1.79e-09!23;UBERON:0004807!1.79e-09!23;UBERON:0005058!1.79e-09!23;UBERON:0003351!1.79e-09!23;UBERON:0009113!1.79e-09!23;UBERON:0003295!1.79e-09!23;UBERON:0009722!1.79e-09!23;UBERON:0005562!1.79e-09!23;UBERON:0007690!1.79e-09!23;UBERON:0003408!8.52e-09!24;UBERON:0002616!1.76e-08!49;UBERON:0000955!4.14e-08!50;UBERON:0006238!4.14e-08!50;UBERON:0003056!4.78e-08!49;UBERON:0001017!6.47e-08!73;UBERON:0005743!6.47e-08!73;UBERON:0000072!6.60e-08!27;UBERON:0000073!2.25e-07!75;UBERON:0001016!2.25e-07!75;UBERON:0004177!4.96e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.04e-18,23;UBERON:0000974,1.04e-18,23;UBERON:0004807,1.04e-18,23;UBERON:0005058,1.04e-18,23;UBERON:0003351,1.04e-18,23;UBERON:0009113,1.04e-18,23;UBERON:0003295,1.04e-18,23;UBERON:0009722,1.04e-18,23;UBERON:0005562,1.04e-18,23;UBERON:0007690,1.04e-18,23;UBERON:0006562,8.15e-18,24;UBERON:0003408,8.15e-18,24;UBERON:0001557,8.15e-18,24;UBERON:0001042,8.15e-18,24;UBERON:0008814,8.15e-18,24;UBERON:0009145,8.15e-18,24;UBERON:0000072,1.58e-15,27;UBERON:0004177,2.87e-14,29;UBERON:0005057,2.87e-14,29;UBERON:0000153,9.29e-12,43;UBERON:0000077,2.36e-11,35;UBERON:0007811,5.79e-11,36;UBERON:0003528,2.91e-10,29;UBERON:0002791,2.91e-10,29;UBERON:0001893,2.91e-10,29;UBERON:0002020,5.19e-10,34;UBERON:0000956,5.91e-10,21;UBERON:0001869,5.91e-10,21;UBERON:0000203,5.91e-10,21;UBERON:0000065,2.68e-09,41;UBERON:0001004,5.16e-09,42;UBERON:0002390,3.10e-08,45;UBERON:0003061,3.10e-08,45;UBERON:0002193,1.48e-07,48;UBERON:0002405,1.48e-07,48;UBERON:0001954,3.69e-07,7;UBERON:0003022,3.69e-07,7;UBERON:0002421,3.69e-07,7;UBERON:0000349,3.69e-07,7;UBERON:0002600,3.69e-07,7;UBERON:0002780,4.46e-07,39;UBERON:0001890,4.46e-07,39;UBERON:0006240,4.46e-07,39;UBERON:0003080,7.58e-07,40 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,1.34437519656986,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.11068836925433,8.10035629990144,6.94072372459561,0.571301968807607,0.441737081903227,6.36952155917761,4.60058260887535,5.51531271966013,0,0.255374676170375,0,0.791317726381163,0.823388792421687,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,1.17851434189467,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,4.02093926761166,0.173824320192276,0.255715457330331,0.20778804455956,0.811206315338788,0,0,0,0,0.520481771850815,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,1.11218899690239,0,1.23469281844766,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,1.3377599609307,0,0,0.853153002140936,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0,0,0,0.32977250588296,0.322928853391811,0.301564624640779,1.19372344003136,0.492422699235184,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,2.8441000856536,0.608175645870493,1.74608627180206,4.54722880422283,1.61124026100733,1.19208812868759,2.16351809135944,1.9199638532695,1.51449674922221,1.5241361331,3.62974266492626,3.80085734885034,2.88635524920988,2.10378423926824,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.515559547031063,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.470546902076653,0.169229215783353,0,0,0.543216455383447,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr12:109149819..109149825,- | |||
}} |
Revision as of 22:07, 12 September 2013
Short description: | p@chr12:109149819..109149825, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109149819..109149825, - |
Coexpression cluster: | MCL_coexpression_mm9:482 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 7.54e-19 | 6 |
CNS neuron (sensu Vertebrata) | 1.52e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-13 | 23 |
hippocampal neuron | 2.94e-10 | 3 |
granule cell | 7.43e-09 | 3 |
neuron | 9.03e-09 | 33 |
neuronal stem cell | 9.03e-09 | 33 |
neuroblast | 9.03e-09 | 33 |
electrically signaling cell | 9.03e-09 | 33 |
electrically responsive cell | 4.32e-07 | 39 |
electrically active cell | 4.32e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.