FFCP PHASE1:Mm9::chr11:96113073..96113088,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=27|UniProt=|association_with_transcript=0bp_to_uc007lbm.1_5end|description=CAGE_peak_1_at_uc007lbm.1_5end|id=chr11:96113073..96113088,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.17e-14,3;CL:0002612,4.47e-14,3;CL:0002611,2.24e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!4.29e-19!21;UBERON:0001008!8.77e-14!17;UBERON:0006554!3.71e-13!16;UBERON:0002113!4.70e-13!14;UBERON:0003918!4.70e-13!14;UBERON:0005095!4.70e-13!14;UBERON:0007687!4.70e-13!14;UBERON:0003064!2.34e-10!14;UBERON:0002240!7.76e-09!6;UBERON:0005174!7.76e-09!6;UBERON:0001137!7.76e-09!6;UBERON:0001948!1.21e-07!5;UBERON:0002315!1.21e-07!5;UBERON:0003103!6.91e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.96e-27,6;UBERON:0005174,5.96e-27,6;UBERON:0001137,5.96e-27,6;UBERON:0001948,8.80e-23,5;UBERON:0002315,8.80e-23,5;UBERON:0000489,6.24e-20,21;UBERON:0002257,4.47e-14,3;UBERON:0003076,2.87e-13,12;UBERON:0003057,2.87e-13,12;UBERON:0010147,1.07e-10,2;UBERON:0003937,1.07e-10,2;UBERON:0005399,1.07e-10,2;UBERON:0002256,2.24e-10,2;UBERON:0003103,5.77e-09,43;UBERON:0000014,3.68e-08,5;UBERON:0001003,3.68e-08,5;UBERON:0002097,3.68e-08,5;UBERON:0002199,3.68e-08,5;UBERON:0007029,3.68e-08,5;UBERON:0007376,3.68e-08,5;UBERON:0002416,3.68e-08,5;UBERON:0007383,3.68e-08,5|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0.86152399231815,0,1.33016393619462,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,3.71346279724945,4.41737081903227,0,0,0,0,0,0,0,0,0,0,0,0,5.00868595305235,2.56269025438385,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,2.56652954828636,2.54805239706646,7.11066703153331,0,0,0,0.5709193985953,0,0.742210695324124,0,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.502666365318702,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0.569003702859245,0.571242563048644,0,0.407302655690628,0.581857461502877,0.841629838683823,0.758838445491087,0.885660887877613,1.09899109488962,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8628002424519,1.48397627647332,0.322928853391811,0.301564624640779,1.3130957840345,1.31312719796049,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55537967950151,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0.214368379079066,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.661774257358546,0|short_description=p1@uc007lbm.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=27 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007lbm.1_5end | |||
|description=CAGE_peak_1_at_uc007lbm.1_5end | |||
|id=chr11:96113073..96113088,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.17e-14,3;CL:0002612,4.47e-14,3;CL:0002611,2.24e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!4.29e-19!21;UBERON:0001008!8.77e-14!17;UBERON:0006554!3.71e-13!16;UBERON:0002113!4.70e-13!14;UBERON:0003918!4.70e-13!14;UBERON:0005095!4.70e-13!14;UBERON:0007687!4.70e-13!14;UBERON:0003064!2.34e-10!14;UBERON:0002240!7.76e-09!6;UBERON:0005174!7.76e-09!6;UBERON:0001137!7.76e-09!6;UBERON:0001948!1.21e-07!5;UBERON:0002315!1.21e-07!5;UBERON:0003103!6.91e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.96e-27,6;UBERON:0005174,5.96e-27,6;UBERON:0001137,5.96e-27,6;UBERON:0001948,8.80e-23,5;UBERON:0002315,8.80e-23,5;UBERON:0000489,6.24e-20,21;UBERON:0002257,4.47e-14,3;UBERON:0003076,2.87e-13,12;UBERON:0003057,2.87e-13,12;UBERON:0010147,1.07e-10,2;UBERON:0003937,1.07e-10,2;UBERON:0005399,1.07e-10,2;UBERON:0002256,2.24e-10,2;UBERON:0003103,5.77e-09,43;UBERON:0000014,3.68e-08,5;UBERON:0001003,3.68e-08,5;UBERON:0002097,3.68e-08,5;UBERON:0002199,3.68e-08,5;UBERON:0007029,3.68e-08,5;UBERON:0007376,3.68e-08,5;UBERON:0002416,3.68e-08,5;UBERON:0007383,3.68e-08,5 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0.86152399231815,0,1.33016393619462,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,3.71346279724945,4.41737081903227,0,0,0,0,0,0,0,0,0,0,0,0,5.00868595305235,2.56269025438385,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,2.56652954828636,2.54805239706646,7.11066703153331,0,0,0,0.5709193985953,0,0.742210695324124,0,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.502666365318702,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0.569003702859245,0.571242563048644,0,0.407302655690628,0.581857461502877,0.841629838683823,0.758838445491087,0.885660887877613,1.09899109488962,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8628002424519,1.48397627647332,0.322928853391811,0.301564624640779,1.3130957840345,1.31312719796049,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55537967950151,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0,0,0.214368379079066,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.661774257358546,0 | |||
|short_description=p1@uc007lbm.1 | |||
}} |
Revision as of 21:38, 12 September 2013
Short description: | p1@uc007lbm.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007lbm.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | 0bp_to_uc007lbm.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.17e-14 | 3 |
neuron of the ventral spinal cord | 4.47e-14 | 3 |
neuron of the dorsal spinal cord | 2.24e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 5.96e-27 | 6 |
dorsal region element | 5.96e-27 | 6 |
dorsum | 5.96e-27 | 6 |
regional part of spinal cord | 8.80e-23 | 5 |
gray matter of spinal cord | 8.80e-23 | 5 |
cavitated compound organ | 6.24e-20 | 21 |
ventral horn of spinal cord | 4.47e-14 | 3 |
posterior neural tube | 2.87e-13 | 12 |
chordal neural plate | 2.87e-13 | 12 |
male accessory sex gland | 1.07e-10 | 2 |
sex gland | 1.07e-10 | 2 |
male reproductive gland | 1.07e-10 | 2 |
dorsal horn of spinal cord | 2.24e-10 | 2 |
compound organ | 5.77e-09 | 43 |
zone of skin | 3.68e-08 | 5 |
skin epidermis | 3.68e-08 | 5 |
skin of body | 3.68e-08 | 5 |
integument | 3.68e-08 | 5 |
surface | 3.68e-08 | 5 |
outer epithelium | 3.68e-08 | 5 |
integumental system | 3.68e-08 | 5 |
enveloping layer of ectoderm | 3.68e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.