FFCP PHASE1:Mm9::chr11:95698578..95698599,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14710|HGNC=|MCL_coexpression_id=131|UniProt=Q61017|association_with_transcript=48bp_to_ENSMUST00000107712_5end|description=CAGE_peak_10_at_Gngt2_5end|id=chr11:95698578..95698599,+|ontology_enrichment_celltype=CL:0002563!5.35e-15!9;CL:0002251!5.35e-15!9;CL:0000239!2.73e-11!6;CL:0000677!2.73e-11!6;CL:0000212!2.73e-11!6;CL:0000584!2.73e-11!6;CL:0000075!1.62e-09!7;CL:0000066!2.29e-09!25;CL:0002076!3.90e-08!15;CL:0000223!6.16e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,6.73e-24,6;CL:0000677,6.73e-24,6;CL:0000584,6.73e-24,6;CL:0000075,2.03e-20,7;CL:0002563,9.02e-16,9;CL:0002251,9.02e-16,9;CL:0000682,4.98e-13,3;CL:0000066,7.40e-12,25;CL:0002076,3.03e-09,15;CL:0000223,8.64e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.33e-24!15;UBERON:0001242!1.77e-21!13;UBERON:0000060!1.77e-21!13;UBERON:0001262!1.77e-21!13;UBERON:0004786!1.77e-21!13;UBERON:0000160!7.01e-21!43;UBERON:0005409!1.04e-15!59;UBERON:0003350!5.35e-15!9;UBERON:0004808!5.35e-15!9;UBERON:0001277!5.35e-15!9;UBERON:0004923!1.05e-13!24;UBERON:0000485!7.19e-12!11;UBERON:0001007!1.56e-08!128;UBERON:0001555!1.56e-08!128;UBERON:0007026!1.56e-08!128;UBERON:0004119!2.94e-08!130;UBERON:0000925!2.94e-08!130;UBERON:0006595!2.94e-08!130;UBERON:0004921!2.87e-07!126;UBERON:0004185!2.87e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-36,15;UBERON:0000160,1.91e-33,31;UBERON:0001242,2.01e-29,13;UBERON:0001262,2.01e-29,13;UBERON:0004786,2.01e-29,13;UBERON:0004923,6.62e-22,24;UBERON:0005409,4.67e-21,47;UBERON:0002108,2.15e-16,4;UBERON:0003350,9.02e-16,9;UBERON:0004808,9.02e-16,9;UBERON:0001277,9.02e-16,9;UBERON:0000331,4.54e-13,3;UBERON:0002116,4.54e-13,3;UBERON:0001204,4.54e-13,3;UBERON:0001168,4.54e-13,3;UBERON:0000485,8.28e-13,11;UBERON:0001007,7.18e-09,116;UBERON:0001555,7.18e-09,116;UBERON:0007026,7.18e-09,116;UBERON:0004119,1.16e-08,118;UBERON:0000925,1.16e-08,118;UBERON:0006595,1.16e-08,118;UBERON:0001962,1.35e-08,2;UBERON:0001961,1.35e-08,2;UBERON:0001744,1.35e-08,2;UBERON:0004921,7.07e-07,114|phase1_expression=0,4.18770489167233,9.55498402718026,7.25914107136392,1.50268718983904,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.06468352960453,5.16808767703518,4.73838195774982,3.66301095566011,25.0830913682414,8.56902441183765,1.99557459589774,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0.7813353445238,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0,0,0,0.22237804384487,0,2.84717436926707,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,1.08069024937347,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p10@Gngt2}} | ||
|EntrezGene=14710 | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=Q61017 | |||
|association_with_transcript=48bp_to_ENSMUST00000107712_5end | |||
|description=CAGE_peak_10_at_Gngt2_5end | |||
|id=chr11:95698578..95698599,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.35e-15!9;CL:0002251!5.35e-15!9;CL:0000239!2.73e-11!6;CL:0000677!2.73e-11!6;CL:0000212!2.73e-11!6;CL:0000584!2.73e-11!6;CL:0000075!1.62e-09!7;CL:0000066!2.29e-09!25;CL:0002076!3.90e-08!15;CL:0000223!6.16e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.73e-24,6;CL:0000677,6.73e-24,6;CL:0000584,6.73e-24,6;CL:0000075,2.03e-20,7;CL:0002563,9.02e-16,9;CL:0002251,9.02e-16,9;CL:0000682,4.98e-13,3;CL:0000066,7.40e-12,25;CL:0002076,3.03e-09,15;CL:0000223,8.64e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.33e-24!15;UBERON:0001242!1.77e-21!13;UBERON:0000060!1.77e-21!13;UBERON:0001262!1.77e-21!13;UBERON:0004786!1.77e-21!13;UBERON:0000160!7.01e-21!43;UBERON:0005409!1.04e-15!59;UBERON:0003350!5.35e-15!9;UBERON:0004808!5.35e-15!9;UBERON:0001277!5.35e-15!9;UBERON:0004923!1.05e-13!24;UBERON:0000485!7.19e-12!11;UBERON:0001007!1.56e-08!128;UBERON:0001555!1.56e-08!128;UBERON:0007026!1.56e-08!128;UBERON:0004119!2.94e-08!130;UBERON:0000925!2.94e-08!130;UBERON:0006595!2.94e-08!130;UBERON:0004921!2.87e-07!126;UBERON:0004185!2.87e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-36,15;UBERON:0000160,1.91e-33,31;UBERON:0001242,2.01e-29,13;UBERON:0001262,2.01e-29,13;UBERON:0004786,2.01e-29,13;UBERON:0004923,6.62e-22,24;UBERON:0005409,4.67e-21,47;UBERON:0002108,2.15e-16,4;UBERON:0003350,9.02e-16,9;UBERON:0004808,9.02e-16,9;UBERON:0001277,9.02e-16,9;UBERON:0000331,4.54e-13,3;UBERON:0002116,4.54e-13,3;UBERON:0001204,4.54e-13,3;UBERON:0001168,4.54e-13,3;UBERON:0000485,8.28e-13,11;UBERON:0001007,7.18e-09,116;UBERON:0001555,7.18e-09,116;UBERON:0007026,7.18e-09,116;UBERON:0004119,1.16e-08,118;UBERON:0000925,1.16e-08,118;UBERON:0006595,1.16e-08,118;UBERON:0001962,1.35e-08,2;UBERON:0001961,1.35e-08,2;UBERON:0001744,1.35e-08,2;UBERON:0004921,7.07e-07,114 | |||
|phase1_expression=0,4.18770489167233,9.55498402718026,7.25914107136392,1.50268718983904,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.06468352960453,5.16808767703518,4.73838195774982,3.66301095566011,25.0830913682414,8.56902441183765,1.99557459589774,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0.7813353445238,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0,0,0,0.22237804384487,0,2.84717436926707,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,1.08069024937347,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p10@Gngt2 | |||
}} |
Revision as of 21:36, 12 September 2013
Short description: | p10@Gngt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Gngt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | 48bp_to_ENSMUST00000107712_5end |
EntrezGene: | Gngt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.73e-24 | 6 |
gut absorptive cell | 6.73e-24 | 6 |
enterocyte | 6.73e-24 | 6 |
columnar/cuboidal epithelial cell | 2.03e-20 | 7 |
intestinal epithelial cell | 9.02e-16 | 9 |
epithelial cell of alimentary canal | 9.02e-16 | 9 |
M cell of gut | 4.98e-13 | 3 |
epithelial cell | 7.40e-12 | 25 |
endo-epithelial cell | 3.03e-09 | 15 |
endodermal cell | 8.64e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.76e-36 | 15 |
intestine | 1.91e-33 | 31 |
intestinal mucosa | 2.01e-29 | 13 |
wall of intestine | 2.01e-29 | 13 |
gastrointestinal system mucosa | 2.01e-29 | 13 |
organ component layer | 6.62e-22 | 24 |
gastrointestinal system | 4.67e-21 | 47 |
small intestine | 2.15e-16 | 4 |
epithelium of mucosa | 9.02e-16 | 9 |
gastrointestinal system epithelium | 9.02e-16 | 9 |
intestinal epithelium | 9.02e-16 | 9 |
ileal mucosa | 4.54e-13 | 3 |
ileum | 4.54e-13 | 3 |
mucosa of small intestine | 4.54e-13 | 3 |
wall of small intestine | 4.54e-13 | 3 |
simple columnar epithelium | 8.28e-13 | 11 |
digestive system | 7.18e-09 | 116 |
digestive tract | 7.18e-09 | 116 |
primitive gut | 7.18e-09 | 116 |
endoderm-derived structure | 1.16e-08 | 118 |
endoderm | 1.16e-08 | 118 |
presumptive endoderm | 1.16e-08 | 118 |
gut-associated lymphoid tissue | 1.35e-08 | 2 |
mucosa-associated lymphoid tissue | 1.35e-08 | 2 |
lymphoid tissue | 1.35e-08 | 2 |
subdivision of digestive tract | 7.07e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.