FFCP PHASE1:Hg19::chr3:123512732..123512741,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7590|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000510571_5end|coexpression_cluster_id=C68|description=CAGE_peak_74_at_MYLK_5end|id=chr3:123512732..123512741,-|ontology_enrichment_celltype=CL:0002536!6.00e-34!2;CL:0002537!1.84e-14!5;CL:0000349!9.12e-07!3;CL:0002577!9.12e-07!3|ontology_enrichment_celltype_v019=CL:0002537;2.71e-40;5!CL:0000349;1.72e-11;19|ontology_enrichment_celltype_v019_2=CL:0002537,2.71e-40,5;CL:0000349,1.72e-11,19|ontology_enrichment_development_v019=UBERON:0003124;2.42e-50;1!UBERON:0004872;2.03e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.80e-42!14;UBERON:0000158!1.80e-42!14;UBERON:0000305!2.54e-38!7;UBERON:0004871!1.34e-33!8;UBERON:0000478!8.85e-25!24;UBERON:0001987!1.33e-17!4;UBERON:0004340!1.33e-17!4;UBERON:0003124!1.77e-10!7;UBERON:0004923!2.37e-10!57|ontology_enrichment_uberon_v019=UBERON:0000305;3.65e-29;7!UBERON:0005631;8.54e-21;10!UBERON:0000158;8.54e-21;10!UBERON:0000478;2.00e-19;24!UBERON:0001987;1.00e-13;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.63e-32,14;UBERON:0000158,1.63e-32,14;UBERON:0000305,3.65e-29,7;UBERON:0004871,1.11e-25,8;UBERON:0000478,2.00e-19,24;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0003124,2.03e-08,7;UBERON:0004923,1.21e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49112314896687,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28198769601764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p74@MYLK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000510571_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_74_at_MYLK_5end | |||
|id=chr3:123512732..123512741,- | |||
|ontology_enrichment_celltype=CL:0002536!6.00e-34!2;CL:0002537!1.84e-14!5;CL:0000349!9.12e-07!3;CL:0002577!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.71e-40;5!CL:0000349;1.72e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.71e-40,5;CL:0000349,1.72e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.42e-50;1!UBERON:0004872;2.03e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.80e-42!14;UBERON:0000158!1.80e-42!14;UBERON:0000305!2.54e-38!7;UBERON:0004871!1.34e-33!8;UBERON:0000478!8.85e-25!24;UBERON:0001987!1.33e-17!4;UBERON:0004340!1.33e-17!4;UBERON:0003124!1.77e-10!7;UBERON:0004923!2.37e-10!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.65e-29;7!UBERON:0005631;8.54e-21;10!UBERON:0000158;8.54e-21;10!UBERON:0000478;2.00e-19;24!UBERON:0001987;1.00e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.63e-32,14;UBERON:0000158,1.63e-32,14;UBERON:0000305,3.65e-29,7;UBERON:0004871,1.11e-25,8;UBERON:0000478,2.00e-19,24;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0003124,2.03e-08,7;UBERON:0004923,1.21e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49112314896687,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28198769601764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p74@MYLK | |||
}} |
Revision as of 21:13, 12 September 2013
Short description: | p74@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_74_at_MYLK_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000510571_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.71e-40 | 5 |
extraembryonic cell | 1.72e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.63e-32 | 14 |
membranous layer | 1.63e-32 | 14 |
amnion | 3.65e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.11e-25 | 8 |
extraembryonic structure | 2.00e-19 | 24 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
chorion | 2.03e-08 | 7 |
organ component layer | 1.21e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.