FFCP PHASE1:Mm9::chr11:77577549..77577562,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1993|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:77577549..77577562,-|id=chr11:77577549..77577562,-|ontology_enrichment_celltype=CL:0002563!5.66e-11!9;CL:0002251!5.66e-11!9;CL:0000066!7.79e-09!25;CL:0000239!4.44e-08!6;CL:0000677!4.44e-08!6;CL:0000212!4.44e-08!6;CL:0000584!4.44e-08!6|ontology_enrichment_celltype_v019_2=CL:0002563,4.60e-35,9;CL:0002251,4.60e-35,9;CL:0000239,1.24e-30,6;CL:0000677,1.24e-30,6;CL:0000584,1.24e-30,6;CL:0000066,2.58e-27,25;CL:0000075,3.28e-26,7;CL:0002076,1.07e-20,15;CL:0000223,3.26e-19,20;CL:0000682,6.53e-16,3;CL:0000764,1.13e-07,3;CL:0000765,1.13e-07,3;CL:0000038,1.13e-07,3;CL:0000547,1.13e-07,3;CL:0002250,2.78e-07,3;CL:0000473,4.21e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.13e-07,3;DOID:0060083,1.13e-07,3;DOID:1240,1.13e-07,3|ontology_enrichment_uberon=UBERON:0000344!2.23e-16!15;UBERON:0001242!1.52e-14!13;UBERON:0000060!1.52e-14!13;UBERON:0001262!1.52e-14!13;UBERON:0004786!1.52e-14!13;UBERON:0000160!3.45e-12!43;UBERON:0003350!5.66e-11!9;UBERON:0004808!5.66e-11!9;UBERON:0001277!5.66e-11!9;UBERON:0000485!7.07e-10!11;UBERON:0004923!3.80e-08!24;UBERON:0005409!4.91e-08!59;UBERON:0001007!6.08e-08!128;UBERON:0001555!6.08e-08!128;UBERON:0007026!6.08e-08!128;UBERON:0004119!1.35e-07!130;UBERON:0000925!1.35e-07!130;UBERON:0006595!1.35e-07!130;UBERON:0004921!5.12e-07!126;UBERON:0004185!5.12e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.60e-35,9;UBERON:0004808,4.60e-35,9;UBERON:0001277,4.60e-35,9;UBERON:0000344,6.86e-32,15;UBERON:0001242,4.39e-30,13;UBERON:0001262,4.39e-30,13;UBERON:0004786,4.39e-30,13;UBERON:0000485,1.54e-28,11;UBERON:0004923,1.93e-19,24;UBERON:0000160,1.11e-14,31;UBERON:0005409,3.35e-09,47|phase1_expression=0.160148847104794,4.88565570695105,3.18499467572675,1.81478526784098,4.00716583957078,3.3575854382378,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,1.37645568640302,3.44539178469012,3.01533397311352,1.72376986148711,0.570070258369122,0.756090389279792,1.10865255327652,2.54012269383853,2.46025915033828,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0.869593466105033,0,1.3599426674155,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,1.05780226665418,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.280543279561274,0.379419222745544,0.147610147979602,0.784993639206874,0.370191491765402,0.592905254174298,0.333690211432188,0,0,0,0.482354319504834,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0,0,0,0,0,0,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:77577549..77577562,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1993 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:77577549..77577562,- | |||
|id=chr11:77577549..77577562,- | |||
|ontology_enrichment_celltype=CL:0002563!5.66e-11!9;CL:0002251!5.66e-11!9;CL:0000066!7.79e-09!25;CL:0000239!4.44e-08!6;CL:0000677!4.44e-08!6;CL:0000212!4.44e-08!6;CL:0000584!4.44e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.60e-35,9;CL:0002251,4.60e-35,9;CL:0000239,1.24e-30,6;CL:0000677,1.24e-30,6;CL:0000584,1.24e-30,6;CL:0000066,2.58e-27,25;CL:0000075,3.28e-26,7;CL:0002076,1.07e-20,15;CL:0000223,3.26e-19,20;CL:0000682,6.53e-16,3;CL:0000764,1.13e-07,3;CL:0000765,1.13e-07,3;CL:0000038,1.13e-07,3;CL:0000547,1.13e-07,3;CL:0002250,2.78e-07,3;CL:0000473,4.21e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.13e-07,3;DOID:0060083,1.13e-07,3;DOID:1240,1.13e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.23e-16!15;UBERON:0001242!1.52e-14!13;UBERON:0000060!1.52e-14!13;UBERON:0001262!1.52e-14!13;UBERON:0004786!1.52e-14!13;UBERON:0000160!3.45e-12!43;UBERON:0003350!5.66e-11!9;UBERON:0004808!5.66e-11!9;UBERON:0001277!5.66e-11!9;UBERON:0000485!7.07e-10!11;UBERON:0004923!3.80e-08!24;UBERON:0005409!4.91e-08!59;UBERON:0001007!6.08e-08!128;UBERON:0001555!6.08e-08!128;UBERON:0007026!6.08e-08!128;UBERON:0004119!1.35e-07!130;UBERON:0000925!1.35e-07!130;UBERON:0006595!1.35e-07!130;UBERON:0004921!5.12e-07!126;UBERON:0004185!5.12e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.60e-35,9;UBERON:0004808,4.60e-35,9;UBERON:0001277,4.60e-35,9;UBERON:0000344,6.86e-32,15;UBERON:0001242,4.39e-30,13;UBERON:0001262,4.39e-30,13;UBERON:0004786,4.39e-30,13;UBERON:0000485,1.54e-28,11;UBERON:0004923,1.93e-19,24;UBERON:0000160,1.11e-14,31;UBERON:0005409,3.35e-09,47 | |||
|phase1_expression=0.160148847104794,4.88565570695105,3.18499467572675,1.81478526784098,4.00716583957078,3.3575854382378,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,1.37645568640302,3.44539178469012,3.01533397311352,1.72376986148711,0.570070258369122,0.756090389279792,1.10865255327652,2.54012269383853,2.46025915033828,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0.869593466105033,0,1.3599426674155,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,1.05780226665418,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.280543279561274,0.379419222745544,0.147610147979602,0.784993639206874,0.370191491765402,0.592905254174298,0.333690211432188,0,0,0,0.482354319504834,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0,0,0,0,0,0,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:77577549..77577562,- | |||
}} |
Revision as of 21:00, 12 September 2013
Short description: | p@chr11:77577549..77577562, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:77577549..77577562, - |
Coexpression cluster: | MCL_coexpression_mm9:1993 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.60e-35 | 9 |
epithelial cell of alimentary canal | 4.60e-35 | 9 |
brush border epithelial cell | 1.24e-30 | 6 |
gut absorptive cell | 1.24e-30 | 6 |
enterocyte | 1.24e-30 | 6 |
epithelial cell | 2.58e-27 | 25 |
columnar/cuboidal epithelial cell | 3.28e-26 | 7 |
endo-epithelial cell | 1.07e-20 | 15 |
endodermal cell | 3.26e-19 | 20 |
M cell of gut | 6.53e-16 | 3 |
erythroid lineage cell | 1.13e-07 | 3 |
erythroblast | 1.13e-07 | 3 |
erythroid progenitor cell | 1.13e-07 | 3 |
proerythroblast | 1.13e-07 | 3 |
intestinal crypt stem cell | 2.78e-07 | 3 |
defensive cell | 4.21e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.60e-35 | 9 |
gastrointestinal system epithelium | 4.60e-35 | 9 |
intestinal epithelium | 4.60e-35 | 9 |
mucosa | 6.86e-32 | 15 |
intestinal mucosa | 4.39e-30 | 13 |
wall of intestine | 4.39e-30 | 13 |
gastrointestinal system mucosa | 4.39e-30 | 13 |
simple columnar epithelium | 1.54e-28 | 11 |
organ component layer | 1.93e-19 | 24 |
intestine | 1.11e-14 | 31 |
gastrointestinal system | 3.35e-09 | 47 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.13e-07 | 3 |
immune system cancer | 1.13e-07 | 3 |
leukemia | 1.13e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.