FFCP PHASE1:Mm9::chr11:72610448..72610491,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=24|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:72610448..72610491,-|id=chr11:72610448..72610491,-|ontology_enrichment_celltype=CL:0000239!1.23e-08!6;CL:0000677!1.23e-08!6;CL:0000212!1.23e-08!6;CL:0000584!1.23e-08!6;CL:0000075!3.19e-07!7;CL:0002563!6.61e-07!9;CL:0002251!6.61e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.43e-12,6;CL:0000677,1.43e-12,6;CL:0000584,1.43e-12,6;CL:0000075,8.48e-11,7;CL:0002563,2.00e-08,9;CL:0002251,2.00e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.58e-17!43;UBERON:0005409!1.35e-16!59;UBERON:0004923!2.03e-14!24;UBERON:0000344!4.78e-14!15;UBERON:0001242!7.92e-12!13;UBERON:0000060!7.92e-12!13;UBERON:0001262!7.92e-12!13;UBERON:0004786!7.92e-12!13;UBERON:0004119!1.79e-07!130;UBERON:0000925!1.79e-07!130;UBERON:0006595!1.79e-07!130;UBERON:0003350!6.61e-07!9;UBERON:0004808!6.61e-07!9;UBERON:0001277!6.61e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.64e-31,31;UBERON:0000344,1.75e-23,15;UBERON:0001242,8.97e-22,13;UBERON:0001262,8.97e-22,13;UBERON:0004786,8.97e-22,13;UBERON:0005409,1.78e-19,47;UBERON:0002108,1.26e-18,4;UBERON:0000331,2.18e-14,3;UBERON:0002116,2.18e-14,3;UBERON:0001204,2.18e-14,3;UBERON:0001168,2.18e-14,3;UBERON:0004923,3.30e-14,24;UBERON:0003350,2.00e-08,9;UBERON:0004808,2.00e-08,9;UBERON:0001277,2.00e-08,9;UBERON:0001007,1.83e-07,116;UBERON:0001555,1.83e-07,116;UBERON:0007026,1.83e-07,116;UBERON:0004119,2.72e-07,118;UBERON:0000925,2.72e-07,118;UBERON:0006595,2.72e-07,118;UBERON:0000485,6.58e-07,11|phase1_expression=0,3.48975407639361,1.36499771816861,16.030603199262,7.01254021924886,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0.639969691173627,1.37645568640302,2.29692785646008,0.86152399231815,1.50829862880122,6.08074942260396,4.03248207615889,1.55211357458713,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,3.57639877292028,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0.515469845288373,0.201683524623343,0.889512175379481,0.190225626112559,1.89811624617805,1.15289268306808,0.251335208800269,0,0.19496408711912,0.898819408654221,2.37751854862164,6.96994456390285,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,3.49777003955821,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr11:72610448..72610491,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:72610448..72610491,- | |||
|id=chr11:72610448..72610491,- | |||
|ontology_enrichment_celltype=CL:0000239!1.23e-08!6;CL:0000677!1.23e-08!6;CL:0000212!1.23e-08!6;CL:0000584!1.23e-08!6;CL:0000075!3.19e-07!7;CL:0002563!6.61e-07!9;CL:0002251!6.61e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.43e-12,6;CL:0000677,1.43e-12,6;CL:0000584,1.43e-12,6;CL:0000075,8.48e-11,7;CL:0002563,2.00e-08,9;CL:0002251,2.00e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.58e-17!43;UBERON:0005409!1.35e-16!59;UBERON:0004923!2.03e-14!24;UBERON:0000344!4.78e-14!15;UBERON:0001242!7.92e-12!13;UBERON:0000060!7.92e-12!13;UBERON:0001262!7.92e-12!13;UBERON:0004786!7.92e-12!13;UBERON:0004119!1.79e-07!130;UBERON:0000925!1.79e-07!130;UBERON:0006595!1.79e-07!130;UBERON:0003350!6.61e-07!9;UBERON:0004808!6.61e-07!9;UBERON:0001277!6.61e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.64e-31,31;UBERON:0000344,1.75e-23,15;UBERON:0001242,8.97e-22,13;UBERON:0001262,8.97e-22,13;UBERON:0004786,8.97e-22,13;UBERON:0005409,1.78e-19,47;UBERON:0002108,1.26e-18,4;UBERON:0000331,2.18e-14,3;UBERON:0002116,2.18e-14,3;UBERON:0001204,2.18e-14,3;UBERON:0001168,2.18e-14,3;UBERON:0004923,3.30e-14,24;UBERON:0003350,2.00e-08,9;UBERON:0004808,2.00e-08,9;UBERON:0001277,2.00e-08,9;UBERON:0001007,1.83e-07,116;UBERON:0001555,1.83e-07,116;UBERON:0007026,1.83e-07,116;UBERON:0004119,2.72e-07,118;UBERON:0000925,2.72e-07,118;UBERON:0006595,2.72e-07,118;UBERON:0000485,6.58e-07,11 | |||
|phase1_expression=0,3.48975407639361,1.36499771816861,16.030603199262,7.01254021924886,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0.639969691173627,1.37645568640302,2.29692785646008,0.86152399231815,1.50829862880122,6.08074942260396,4.03248207615889,1.55211357458713,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,3.57639877292028,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0.515469845288373,0.201683524623343,0.889512175379481,0.190225626112559,1.89811624617805,1.15289268306808,0.251335208800269,0,0.19496408711912,0.898819408654221,2.37751854862164,6.96994456390285,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,3.49777003955821,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:72610448..72610491,- | |||
}} |
Revision as of 20:49, 12 September 2013
Short description: | p@chr11:72610448..72610491, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:72610448..72610491, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.43e-12 | 6 |
gut absorptive cell | 1.43e-12 | 6 |
enterocyte | 1.43e-12 | 6 |
columnar/cuboidal epithelial cell | 8.48e-11 | 7 |
intestinal epithelial cell | 2.00e-08 | 9 |
epithelial cell of alimentary canal | 2.00e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.64e-31 | 31 |
mucosa | 1.75e-23 | 15 |
intestinal mucosa | 8.97e-22 | 13 |
wall of intestine | 8.97e-22 | 13 |
gastrointestinal system mucosa | 8.97e-22 | 13 |
gastrointestinal system | 1.78e-19 | 47 |
small intestine | 1.26e-18 | 4 |
ileal mucosa | 2.18e-14 | 3 |
ileum | 2.18e-14 | 3 |
mucosa of small intestine | 2.18e-14 | 3 |
wall of small intestine | 2.18e-14 | 3 |
organ component layer | 3.30e-14 | 24 |
epithelium of mucosa | 2.00e-08 | 9 |
gastrointestinal system epithelium | 2.00e-08 | 9 |
intestinal epithelium | 2.00e-08 | 9 |
digestive system | 1.83e-07 | 116 |
digestive tract | 1.83e-07 | 116 |
primitive gut | 1.83e-07 | 116 |
endoderm-derived structure | 2.72e-07 | 118 |
endoderm | 2.72e-07 | 118 |
presumptive endoderm | 2.72e-07 | 118 |
simple columnar epithelium | 6.58e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.