FFCP PHASE1:Mm9::chr11:69414521..69414532,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69414521..69414532,-|id=chr11:69414521..69414532,-|ontology_enrichment_celltype=CL:0002319!1.03e-08!43;CL:0000117!1.18e-08!23;CL:0000337!1.18e-08!23;CL:0000221!2.85e-08!44;CL:0000133!2.85e-08!44;CL:0002453!1.23e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,4.04e-20,8;CL:0002319,1.10e-16,43;CL:0000221,3.27e-16,44;CL:0000133,3.27e-16,44;CL:0000333,7.89e-16,10;CL:0000095,7.89e-16,10;CL:0000243,7.89e-16,10;CL:0000123,7.89e-16,10;CL:0000125,7.89e-16,10;CL:0000030,7.89e-16,10;CL:0000339,7.89e-16,10;CL:0000128,1.08e-14,6;CL:0000126,1.08e-14,6;CL:0000127,1.08e-14,6;CL:0000117,2.19e-10,23;CL:0000337,2.19e-10,23;CL:0002610,2.14e-09,3;CL:0002614,2.28e-09,3;CL:0002321,1.17e-08,70;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.31e-24!73;UBERON:0005743!5.31e-24!73;UBERON:0000073!1.05e-22!75;UBERON:0001016!1.05e-22!75;UBERON:0001049!1.67e-22!52;UBERON:0005068!1.67e-22!52;UBERON:0006241!1.67e-22!52;UBERON:0007135!1.67e-22!52;UBERON:0002346!6.40e-22!71;UBERON:0003075!6.40e-22!71;UBERON:0007284!6.40e-22!71;UBERON:0000955!4.54e-21!50;UBERON:0006238!4.54e-21!50;UBERON:0002616!2.11e-20!49;UBERON:0004121!7.61e-20!102;UBERON:0000924!7.61e-20!102;UBERON:0006601!7.61e-20!102;UBERON:0000033!5.04e-19!63;UBERON:0002020!3.18e-15!34;UBERON:0003056!2.64e-14!49;UBERON:0003080!1.49e-13!40;UBERON:0002780!7.23e-13!39;UBERON:0001890!7.23e-13!39;UBERON:0006240!7.23e-13!39;UBERON:0002791!1.11e-11!29;UBERON:0003528!1.11e-11!29;UBERON:0001893!1.11e-11!29;UBERON:0003076!2.01e-10!12;UBERON:0003057!2.01e-10!12;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0007811!2.34e-09!86;UBERON:0000025!5.91e-09!114;UBERON:0002619!2.00e-08!17;UBERON:0000153!1.43e-07!94;UBERON:0004111!4.14e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.20e-31,73;UBERON:0001016,2.22e-30,75;UBERON:0000073,3.16e-30,54;UBERON:0001049,2.83e-26,52;UBERON:0005068,2.83e-26,52;UBERON:0006241,2.83e-26,52;UBERON:0007135,2.83e-26,52;UBERON:0003076,1.25e-24,12;UBERON:0003057,1.25e-24,12;UBERON:0004121,2.41e-24,95;UBERON:0000924,2.41e-24,95;UBERON:0006601,2.41e-24,95;UBERON:0002346,3.57e-22,64;UBERON:0003075,3.57e-22,64;UBERON:0007284,3.57e-22,64;UBERON:0010371,9.72e-19,73;UBERON:0002616,3.72e-18,46;UBERON:0000955,1.13e-17,47;UBERON:0006238,1.13e-17,47;UBERON:0002020,2.58e-16,34;UBERON:0004733,5.39e-15,6;UBERON:0004732,5.39e-15,6;UBERON:0002028,5.39e-15,6;UBERON:0007277,5.39e-15,6;UBERON:0010314,1.08e-13,92;UBERON:0002950,1.46e-11,4;UBERON:0001891,1.46e-11,4;UBERON:0009616,1.46e-11,4;UBERON:0010286,1.46e-11,4;UBERON:0002240,2.95e-11,6;UBERON:0005174,2.95e-11,6;UBERON:0001137,2.95e-11,6;UBERON:0003528,1.50e-10,29;UBERON:0002791,1.50e-10,29;UBERON:0001893,1.50e-10,29;UBERON:0002619,1.68e-10,17;UBERON:0002037,1.78e-10,4;UBERON:0002680,1.78e-10,4;UBERON:0001895,1.78e-10,4;UBERON:0010092,1.78e-10,4;UBERON:0006215,1.78e-10,4;UBERON:0003080,9.08e-10,40;UBERON:0004684,2.14e-09,3;UBERON:0002275,2.14e-09,3;UBERON:0002038,2.28e-09,3;UBERON:0009663,2.28e-09,3;UBERON:0009661,2.28e-09,3;UBERON:0000125,2.28e-09,3;UBERON:0002308,2.28e-09,3;UBERON:0000025,5.50e-09,114;UBERON:0001948,8.62e-09,5;UBERON:0002315,8.62e-09,5;UBERON:0003056,1.21e-08,49;UBERON:0002780,1.39e-08,39;UBERON:0001890,1.39e-08,39;UBERON:0006240,1.39e-08,39;UBERON:0002021,1.81e-08,10;UBERON:0000411,1.81e-08,10;UBERON:0001950,1.81e-08,10;UBERON:0000956,3.31e-08,21;UBERON:0001869,3.31e-08,21;UBERON:0000203,3.31e-08,21;UBERON:0004111,4.86e-08,122;UBERON:0011216,9.62e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,1.74420125104357,3.95435128922049,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,8.68840320503374,23.8215349299364,0.207379224616955,0.405017814995072,0.210324961351382,2.28520787523043,4.19650227808066,0,0.0958454710182364,0.919218786610021,5.50579404996943,4.59674417106676,4.6081959976873,0,0.365950574409639,0,7.53794097303729,5.06486349028512,3.51435969886663,3.24091444021034,2.98980529678116,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.323533699894818,0.662524555381181,0,0,2.63502717310392,2.72280718857492,0,0,0,0,2.54644086988199,0.457500602818626,0.502617408451458,0.869121600961382,1.27857728665165,2.28566849015516,0.973447578406546,0,0.248813941220186,0,0.841767423545896,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0.771335564436891,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.514523061896422,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,1.99259867206745,0,1.51482556322624,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,4.63563255026274,0.170870880797853,0.412773735926445,0,0.376736914009382,0.546776910884101,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0,0.194451188344048,0.387479470433193,0.675824501963113,0.352071715937262,0.781226309063701,0.734015410979976,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.14579102687879,3.09335728218638,0.685082519770642,2.2661816921691,0.675022500231806,3.15224842256954,0,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.169229215783353,0,0,0.543216455383447,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0.231867835620421|short_description=p@chr11:69414521..69414532,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69414521..69414532,- | |||
|id=chr11:69414521..69414532,- | |||
|ontology_enrichment_celltype=CL:0002319!1.03e-08!43;CL:0000117!1.18e-08!23;CL:0000337!1.18e-08!23;CL:0000221!2.85e-08!44;CL:0000133!2.85e-08!44;CL:0002453!1.23e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.04e-20,8;CL:0002319,1.10e-16,43;CL:0000221,3.27e-16,44;CL:0000133,3.27e-16,44;CL:0000333,7.89e-16,10;CL:0000095,7.89e-16,10;CL:0000243,7.89e-16,10;CL:0000123,7.89e-16,10;CL:0000125,7.89e-16,10;CL:0000030,7.89e-16,10;CL:0000339,7.89e-16,10;CL:0000128,1.08e-14,6;CL:0000126,1.08e-14,6;CL:0000127,1.08e-14,6;CL:0000117,2.19e-10,23;CL:0000337,2.19e-10,23;CL:0002610,2.14e-09,3;CL:0002614,2.28e-09,3;CL:0002321,1.17e-08,70;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.31e-24!73;UBERON:0005743!5.31e-24!73;UBERON:0000073!1.05e-22!75;UBERON:0001016!1.05e-22!75;UBERON:0001049!1.67e-22!52;UBERON:0005068!1.67e-22!52;UBERON:0006241!1.67e-22!52;UBERON:0007135!1.67e-22!52;UBERON:0002346!6.40e-22!71;UBERON:0003075!6.40e-22!71;UBERON:0007284!6.40e-22!71;UBERON:0000955!4.54e-21!50;UBERON:0006238!4.54e-21!50;UBERON:0002616!2.11e-20!49;UBERON:0004121!7.61e-20!102;UBERON:0000924!7.61e-20!102;UBERON:0006601!7.61e-20!102;UBERON:0000033!5.04e-19!63;UBERON:0002020!3.18e-15!34;UBERON:0003056!2.64e-14!49;UBERON:0003080!1.49e-13!40;UBERON:0002780!7.23e-13!39;UBERON:0001890!7.23e-13!39;UBERON:0006240!7.23e-13!39;UBERON:0002791!1.11e-11!29;UBERON:0003528!1.11e-11!29;UBERON:0001893!1.11e-11!29;UBERON:0003076!2.01e-10!12;UBERON:0003057!2.01e-10!12;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0007811!2.34e-09!86;UBERON:0000025!5.91e-09!114;UBERON:0002619!2.00e-08!17;UBERON:0000153!1.43e-07!94;UBERON:0004111!4.14e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.20e-31,73;UBERON:0001016,2.22e-30,75;UBERON:0000073,3.16e-30,54;UBERON:0001049,2.83e-26,52;UBERON:0005068,2.83e-26,52;UBERON:0006241,2.83e-26,52;UBERON:0007135,2.83e-26,52;UBERON:0003076,1.25e-24,12;UBERON:0003057,1.25e-24,12;UBERON:0004121,2.41e-24,95;UBERON:0000924,2.41e-24,95;UBERON:0006601,2.41e-24,95;UBERON:0002346,3.57e-22,64;UBERON:0003075,3.57e-22,64;UBERON:0007284,3.57e-22,64;UBERON:0010371,9.72e-19,73;UBERON:0002616,3.72e-18,46;UBERON:0000955,1.13e-17,47;UBERON:0006238,1.13e-17,47;UBERON:0002020,2.58e-16,34;UBERON:0004733,5.39e-15,6;UBERON:0004732,5.39e-15,6;UBERON:0002028,5.39e-15,6;UBERON:0007277,5.39e-15,6;UBERON:0010314,1.08e-13,92;UBERON:0002950,1.46e-11,4;UBERON:0001891,1.46e-11,4;UBERON:0009616,1.46e-11,4;UBERON:0010286,1.46e-11,4;UBERON:0002240,2.95e-11,6;UBERON:0005174,2.95e-11,6;UBERON:0001137,2.95e-11,6;UBERON:0003528,1.50e-10,29;UBERON:0002791,1.50e-10,29;UBERON:0001893,1.50e-10,29;UBERON:0002619,1.68e-10,17;UBERON:0002037,1.78e-10,4;UBERON:0002680,1.78e-10,4;UBERON:0001895,1.78e-10,4;UBERON:0010092,1.78e-10,4;UBERON:0006215,1.78e-10,4;UBERON:0003080,9.08e-10,40;UBERON:0004684,2.14e-09,3;UBERON:0002275,2.14e-09,3;UBERON:0002038,2.28e-09,3;UBERON:0009663,2.28e-09,3;UBERON:0009661,2.28e-09,3;UBERON:0000125,2.28e-09,3;UBERON:0002308,2.28e-09,3;UBERON:0000025,5.50e-09,114;UBERON:0001948,8.62e-09,5;UBERON:0002315,8.62e-09,5;UBERON:0003056,1.21e-08,49;UBERON:0002780,1.39e-08,39;UBERON:0001890,1.39e-08,39;UBERON:0006240,1.39e-08,39;UBERON:0002021,1.81e-08,10;UBERON:0000411,1.81e-08,10;UBERON:0001950,1.81e-08,10;UBERON:0000956,3.31e-08,21;UBERON:0001869,3.31e-08,21;UBERON:0000203,3.31e-08,21;UBERON:0004111,4.86e-08,122;UBERON:0011216,9.62e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,1.74420125104357,3.95435128922049,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,8.68840320503374,23.8215349299364,0.207379224616955,0.405017814995072,0.210324961351382,2.28520787523043,4.19650227808066,0,0.0958454710182364,0.919218786610021,5.50579404996943,4.59674417106676,4.6081959976873,0,0.365950574409639,0,7.53794097303729,5.06486349028512,3.51435969886663,3.24091444021034,2.98980529678116,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0.323533699894818,0.662524555381181,0,0,2.63502717310392,2.72280718857492,0,0,0,0,2.54644086988199,0.457500602818626,0.502617408451458,0.869121600961382,1.27857728665165,2.28566849015516,0.973447578406546,0,0.248813941220186,0,0.841767423545896,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.0937017245597288,1.81092359517311,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0.771335564436891,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.514523061896422,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,1.99259867206745,0,1.51482556322624,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,4.63563255026274,0.170870880797853,0.412773735926445,0,0.376736914009382,0.546776910884101,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0,0.194451188344048,0.387479470433193,0.675824501963113,0.352071715937262,0.781226309063701,0.734015410979976,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.14579102687879,3.09335728218638,0.685082519770642,2.2661816921691,0.675022500231806,3.15224842256954,0,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.952587382566147,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.169229215783353,0,0,0.543216455383447,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr11:69414521..69414532,- | |||
}} |
Revision as of 20:37, 12 September 2013
Short description: | p@chr11:69414521..69414532, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69414521..69414532, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.04e-20 | 8 |
neural cell | 1.10e-16 | 43 |
ectodermal cell | 3.27e-16 | 44 |
neurectodermal cell | 3.27e-16 | 44 |
migratory neural crest cell | 7.89e-16 | 10 |
neuron associated cell | 7.89e-16 | 10 |
glial cell (sensu Vertebrata) | 7.89e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 7.89e-16 | 10 |
glial cell | 7.89e-16 | 10 |
glioblast | 7.89e-16 | 10 |
glioblast (sensu Vertebrata) | 7.89e-16 | 10 |
oligodendrocyte | 1.08e-14 | 6 |
macroglial cell | 1.08e-14 | 6 |
astrocyte | 1.08e-14 | 6 |
CNS neuron (sensu Vertebrata) | 2.19e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.19e-10 | 23 |
raphe nuclei neuron | 2.14e-09 | 3 |
neuron of the substantia nigra | 2.28e-09 | 3 |
embryonic cell | 1.17e-08 | 70 |
central nervous system macrophage | 4.56e-07 | 2 |
microglial cell | 4.56e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.