FFCP PHASE1:Mm9::chr11:68760875..68760914,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=442801|HGNC=|MCL_coexpression_id=159|UniProt=|association_with_transcript=0bp_to_ENSMUST00000131686_5end|description=CAGE_peak_3_at_Arhgef15_5end|id=chr11:68760875..68760914,-|ontology_enrichment_celltype=CL:0000117!9.00e-14!23;CL:0000337!9.00e-14!23;CL:0000540!3.38e-10!33;CL:0000047!3.38e-10!33;CL:0000031!3.38e-10!33;CL:0000404!3.38e-10!33;CL:0000393!1.80e-07!39;CL:0000211!1.80e-07!39;CL:0000221!9.72e-07!44;CL:0000133!9.72e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-17,23;CL:0000337,2.90e-17,23;CL:0000540,2.01e-10,33;CL:0000047,2.01e-10,33;CL:0000031,2.01e-10,33;CL:0000404,2.01e-10,33;CL:0000393,4.68e-08,39;CL:0000211,4.68e-08,39;CL:0002319,7.25e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.57e-28!71;UBERON:0003075!6.57e-28!71;UBERON:0007284!6.57e-28!71;UBERON:0004121!1.00e-23!102;UBERON:0000924!1.00e-23!102;UBERON:0006601!1.00e-23!102;UBERON:0001049!3.53e-22!52;UBERON:0005068!3.53e-22!52;UBERON:0006241!3.53e-22!52;UBERON:0007135!3.53e-22!52;UBERON:0001017!1.16e-21!73;UBERON:0005743!1.16e-21!73;UBERON:0000073!1.29e-21!75;UBERON:0001016!1.29e-21!75;UBERON:0000033!3.73e-21!63;UBERON:0000955!2.03e-20!50;UBERON:0006238!2.03e-20!50;UBERON:0002616!8.18e-20!49;UBERON:0003056!1.75e-18!49;UBERON:0002020!1.42e-16!34;UBERON:0003080!1.31e-15!40;UBERON:0002780!8.15e-15!39;UBERON:0001890!8.15e-15!39;UBERON:0006240!8.15e-15!39;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0007811!9.08e-10!86;UBERON:0002021!4.72e-08!10;UBERON:0000411!4.72e-08!10;UBERON:0001950!4.72e-08!10;UBERON:0000153!6.85e-08!94;UBERON:0000956!2.22e-07!21;UBERON:0001869!2.22e-07!21;UBERON:0000203!2.22e-07!21;UBERON:0003076!2.49e-07!12;UBERON:0003057!2.49e-07!12;UBERON:0002420!3.33e-07!8;UBERON:0007245!3.33e-07!8;UBERON:0010009!3.33e-07!8;UBERON:0010011!3.33e-07!8;UBERON:0000454!3.33e-07!8;UBERON:0002619!7.64e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-25,54;UBERON:0002346,1.23e-24,64;UBERON:0003075,1.23e-24,64;UBERON:0007284,1.23e-24,64;UBERON:0001017,3.06e-23,73;UBERON:0001049,5.70e-23,52;UBERON:0005068,5.70e-23,52;UBERON:0006241,5.70e-23,52;UBERON:0007135,5.70e-23,52;UBERON:0001016,2.65e-22,75;UBERON:0004121,1.77e-21,95;UBERON:0000924,1.77e-21,95;UBERON:0006601,1.77e-21,95;UBERON:0002020,6.99e-21,34;UBERON:0010371,3.36e-20,73;UBERON:0010314,6.97e-20,92;UBERON:0000955,7.04e-17,47;UBERON:0006238,7.04e-17,47;UBERON:0003056,2.87e-16,49;UBERON:0002616,5.35e-16,46;UBERON:0003528,1.50e-14,29;UBERON:0002791,1.50e-14,29;UBERON:0001893,1.50e-14,29;UBERON:0002021,1.87e-13,10;UBERON:0000411,1.87e-13,10;UBERON:0001950,1.87e-13,10;UBERON:0003080,3.82e-13,40;UBERON:0002780,4.78e-12,39;UBERON:0001890,4.78e-12,39;UBERON:0006240,4.78e-12,39;UBERON:0002420,6.62e-12,8;UBERON:0007245,6.62e-12,8;UBERON:0010009,6.62e-12,8;UBERON:0010011,6.62e-12,8;UBERON:0000454,6.62e-12,8;UBERON:0003076,1.10e-11,12;UBERON:0003057,1.10e-11,12;UBERON:0002240,7.46e-10,6;UBERON:0005174,7.46e-10,6;UBERON:0001137,7.46e-10,6;UBERON:0001948,1.09e-08,5;UBERON:0002315,1.09e-08,5;UBERON:0000369,1.43e-07,5;UBERON:0002435,1.43e-07,5;UBERON:0000204,1.43e-07,5;UBERON:0010082,1.43e-07,5;UBERON:0002950,1.87e-07,4;UBERON:0001891,1.87e-07,4;UBERON:0009616,1.87e-07,4;UBERON:0010286,1.87e-07,4;UBERON:0002619,6.81e-07,17|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.66486090406874,4.7609188134483,6.33831403506179,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,7.9982275633065,7.73039893330647,0.122490799214954,0.287536413054709,0.919218786610021,12.1127469099328,4.59674417106676,6.45147439676223,6.98997324970027,7.95942499340964,3.12548022334056,7.2587579740359,10.6924895906019,6.41752640662602,9.72274332063103,5.69486723196412,5.77838282058432,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0.742210695324124,3.12273588179045,1.52232739156071,1.61430848079241,1.65794904607885,1.05829836422134,1.0053327306374,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,4.9772735491963,3.14170060220183,0,0,0,0,9.8861822007183,2.28750301409313,2.89005009859588,4.69325664519146,3.06858548796397,5.40248915854856,4.54275536589721,0.305518091550949,0.248813941220186,0,1.05220927943237,0,0.689706313300419,0.540186389416048,1.20563854268572,2.10913147369116,1.7935920839879,1.40552586839593,1.29351685369508,0.646703978798527,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0.853153002140936,0.696710015581316,0.515469845288373,0,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.456994050438915,0,0,0,0.280543279561274,0,0.1476101479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| ||
|EntrezGene=442801 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000131686_5end | |||
|description=CAGE_peak_3_at_Arhgef15_5end | |||
|id=chr11:68760875..68760914,- | |||
|ontology_enrichment_celltype=CL:0000117!9.00e-14!23;CL:0000337!9.00e-14!23;CL:0000540!3.38e-10!33;CL:0000047!3.38e-10!33;CL:0000031!3.38e-10!33;CL:0000404!3.38e-10!33;CL:0000393!1.80e-07!39;CL:0000211!1.80e-07!39;CL:0000221!9.72e-07!44;CL:0000133!9.72e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-17,23;CL:0000337,2.90e-17,23;CL:0000540,2.01e-10,33;CL:0000047,2.01e-10,33;CL:0000031,2.01e-10,33;CL:0000404,2.01e-10,33;CL:0000393,4.68e-08,39;CL:0000211,4.68e-08,39;CL:0002319,7.25e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.57e-28!71;UBERON:0003075!6.57e-28!71;UBERON:0007284!6.57e-28!71;UBERON:0004121!1.00e-23!102;UBERON:0000924!1.00e-23!102;UBERON:0006601!1.00e-23!102;UBERON:0001049!3.53e-22!52;UBERON:0005068!3.53e-22!52;UBERON:0006241!3.53e-22!52;UBERON:0007135!3.53e-22!52;UBERON:0001017!1.16e-21!73;UBERON:0005743!1.16e-21!73;UBERON:0000073!1.29e-21!75;UBERON:0001016!1.29e-21!75;UBERON:0000033!3.73e-21!63;UBERON:0000955!2.03e-20!50;UBERON:0006238!2.03e-20!50;UBERON:0002616!8.18e-20!49;UBERON:0003056!1.75e-18!49;UBERON:0002020!1.42e-16!34;UBERON:0003080!1.31e-15!40;UBERON:0002780!8.15e-15!39;UBERON:0001890!8.15e-15!39;UBERON:0006240!8.15e-15!39;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0007811!9.08e-10!86;UBERON:0002021!4.72e-08!10;UBERON:0000411!4.72e-08!10;UBERON:0001950!4.72e-08!10;UBERON:0000153!6.85e-08!94;UBERON:0000956!2.22e-07!21;UBERON:0001869!2.22e-07!21;UBERON:0000203!2.22e-07!21;UBERON:0003076!2.49e-07!12;UBERON:0003057!2.49e-07!12;UBERON:0002420!3.33e-07!8;UBERON:0007245!3.33e-07!8;UBERON:0010009!3.33e-07!8;UBERON:0010011!3.33e-07!8;UBERON:0000454!3.33e-07!8;UBERON:0002619!7.64e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-25,54;UBERON:0002346,1.23e-24,64;UBERON:0003075,1.23e-24,64;UBERON:0007284,1.23e-24,64;UBERON:0001017,3.06e-23,73;UBERON:0001049,5.70e-23,52;UBERON:0005068,5.70e-23,52;UBERON:0006241,5.70e-23,52;UBERON:0007135,5.70e-23,52;UBERON:0001016,2.65e-22,75;UBERON:0004121,1.77e-21,95;UBERON:0000924,1.77e-21,95;UBERON:0006601,1.77e-21,95;UBERON:0002020,6.99e-21,34;UBERON:0010371,3.36e-20,73;UBERON:0010314,6.97e-20,92;UBERON:0000955,7.04e-17,47;UBERON:0006238,7.04e-17,47;UBERON:0003056,2.87e-16,49;UBERON:0002616,5.35e-16,46;UBERON:0003528,1.50e-14,29;UBERON:0002791,1.50e-14,29;UBERON:0001893,1.50e-14,29;UBERON:0002021,1.87e-13,10;UBERON:0000411,1.87e-13,10;UBERON:0001950,1.87e-13,10;UBERON:0003080,3.82e-13,40;UBERON:0002780,4.78e-12,39;UBERON:0001890,4.78e-12,39;UBERON:0006240,4.78e-12,39;UBERON:0002420,6.62e-12,8;UBERON:0007245,6.62e-12,8;UBERON:0010009,6.62e-12,8;UBERON:0010011,6.62e-12,8;UBERON:0000454,6.62e-12,8;UBERON:0003076,1.10e-11,12;UBERON:0003057,1.10e-11,12;UBERON:0002240,7.46e-10,6;UBERON:0005174,7.46e-10,6;UBERON:0001137,7.46e-10,6;UBERON:0001948,1.09e-08,5;UBERON:0002315,1.09e-08,5;UBERON:0000369,1.43e-07,5;UBERON:0002435,1.43e-07,5;UBERON:0000204,1.43e-07,5;UBERON:0010082,1.43e-07,5;UBERON:0002950,1.87e-07,4;UBERON:0001891,1.87e-07,4;UBERON:0009616,1.87e-07,4;UBERON:0010286,1.87e-07,4;UBERON:0002619,6.81e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.66486090406874,4.7609188134483,6.33831403506179,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,7.9982275633065,7.73039893330647,0.122490799214954,0.287536413054709,0.919218786610021,12.1127469099328,4.59674417106676,6.45147439676223,6.98997324970027,7.95942499340964,3.12548022334056,7.2587579740359,10.6924895906019,6.41752640662602,9.72274332063103,5.69486723196412,5.77838282058432,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0,0.742210695324124,3.12273588179045,1.52232739156071,1.61430848079241,1.65794904607885,1.05829836422134,1.0053327306374,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,4.9772735491963,3.14170060220183,0,0,0,0,9.8861822007183,2.28750301409313,2.89005009859588,4.69325664519146,3.06858548796397,5.40248915854856,4.54275536589721,0.305518091550949,0.248813941220186,0,1.05220927943237,0,0.689706313300419,0.540186389416048,1.20563854268572,2.10913147369116,1.7935920839879,1.40552586839593,1.29351685369508,0.646703978798527,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0.853153002140936,0.696710015581316,0.515469845288373,0,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.758671603812327,0.456994050438915,0,0,0,0.280543279561274,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,3.6335622843583,0.327869890753351,0,0.631016438832513,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.713475270408282,0.822745103010605,0.304464949114599,0,0,0,0.32977250588296,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,1.26534397432454,0.406638934253697,0.86404272657441,0.418176592028937,0.218362563746178,0.404593039154462,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,3.43737308063638,5.32744865265431,6.85082519770642,9.06472676867641,3.37511250115903,5.40385443869065,3.17199686288943,3.10656187051092,0.518936737920883,0.399024873401031,0.682934423016537,0.972426868273176,1.67690530102386,1.10306105070008,0.44449345560323,1.44224540067226,1.92551525755089,1.26348605881899,1.01391719956096,1.88626341386076,0.561849044819294,0.89635213366817,0.861532034334199,0,1.0429589335037,1.92909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.581385666529314,1.03520318456864,0.761531471025089,0.914639864363863,1.31534855718921,0.407412341537585,1.68342681497322,0.711810108745045,1.18205378850676,0.409231043169689,0.77468420592983,1.35034627686799,1.49886346762768,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Arhgef15 | |||
}} |
Revision as of 20:31, 12 September 2013
Short description: | p3@Arhgef15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgef15_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000131686_5end |
EntrezGene: | Arhgef15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.90e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.90e-17 | 23 |
neuron | 2.01e-10 | 33 |
neuronal stem cell | 2.01e-10 | 33 |
neuroblast | 2.01e-10 | 33 |
electrically signaling cell | 2.01e-10 | 33 |
electrically responsive cell | 4.68e-08 | 39 |
electrically active cell | 4.68e-08 | 39 |
neural cell | 7.25e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.