FFCP PHASE1:Mm9::chr11:54720620..54720632,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=206|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54720620..54720632,+|id=chr11:54720620..54720632,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,5.99e-07,3;CL:0000737,5.99e-07,3;CL:0000746,5.99e-07,3;CL:0000513,5.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.54e-09!14;UBERON:0003918!6.54e-09!14;UBERON:0005095!6.54e-09!14;UBERON:0007687!6.54e-09!14;UBERON:0001008!4.11e-08!17;UBERON:0006554!1.98e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.47e-14,3;UBERON:0000478,4.47e-14,3;UBERON:0000158,4.47e-14,3;UBERON:0006554,8.93e-12,18;UBERON:0001008,4.09e-11,19;UBERON:0005795,6.89e-11,4;UBERON:0000995,6.89e-11,4;UBERON:0001987,7.03e-10,2;UBERON:0003124,7.03e-10,2;UBERON:0004340,7.03e-10,2;UBERON:0003975,8.33e-09,5;UBERON:0004175,3.40e-08,9;UBERON:0002113,3.72e-08,14;UBERON:0003918,3.72e-08,14;UBERON:0011143,3.72e-08,14;UBERON:0005095,3.72e-08,14;UBERON:0007687,3.72e-08,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0,0,0,1.54355661621568,3.43840127926508,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,2.22475470960936,1.59059292611903,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0.196764231747404,0,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0.760902504450237,0,1.15289268306808,1.00534083520108,2.38747766449381,1.55971269695296,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.49095073923223,1.58091342810643,5.46157547524528,4.86696056308262,10.2419646055094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.221464689648775,0,0.491589944147214,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,3.05073220482823,1.27099242518292,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,4.87974436173073,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.543216455383447,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr11:54720620..54720632,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:54720620..54720632,+ | |||
|id=chr11:54720620..54720632,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,5.99e-07,3;CL:0000737,5.99e-07,3;CL:0000746,5.99e-07,3;CL:0000513,5.99e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.54e-09!14;UBERON:0003918!6.54e-09!14;UBERON:0005095!6.54e-09!14;UBERON:0007687!6.54e-09!14;UBERON:0001008!4.11e-08!17;UBERON:0006554!1.98e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.47e-14,3;UBERON:0000478,4.47e-14,3;UBERON:0000158,4.47e-14,3;UBERON:0006554,8.93e-12,18;UBERON:0001008,4.09e-11,19;UBERON:0005795,6.89e-11,4;UBERON:0000995,6.89e-11,4;UBERON:0001987,7.03e-10,2;UBERON:0003124,7.03e-10,2;UBERON:0004340,7.03e-10,2;UBERON:0003975,8.33e-09,5;UBERON:0004175,3.40e-08,9;UBERON:0002113,3.72e-08,14;UBERON:0003918,3.72e-08,14;UBERON:0011143,3.72e-08,14;UBERON:0005095,3.72e-08,14;UBERON:0007687,3.72e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0,0,0,1.54355661621568,3.43840127926508,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,2.22475470960936,1.59059292611903,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0.196764231747404,0,0,0,0,0.493679549740441,0,0.0810688095458557,0,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0.760902504450237,0,1.15289268306808,1.00534083520108,2.38747766449381,1.55971269695296,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.49095073923223,1.58091342810643,5.46157547524528,4.86696056308262,10.2419646055094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.221464689648775,0,0.491589944147214,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,3.05073220482823,1.27099242518292,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,4.87974436173073,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.543216455383447,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:54720620..54720632,+ | |||
}} |
Revision as of 20:00, 12 September 2013
Short description: | p@chr11:54720620..54720632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54720620..54720632, + |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 5.99e-07 | 3 |
striated muscle cell | 5.99e-07 | 3 |
cardiac muscle cell | 5.99e-07 | 3 |
cardiac muscle myoblast | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.47e-14 | 3 |
extraembryonic structure | 4.47e-14 | 3 |
membranous layer | 4.47e-14 | 3 |
urinary system structure | 8.93e-12 | 18 |
renal system | 4.09e-11 | 19 |
embryonic uterus | 6.89e-11 | 4 |
uterus | 6.89e-11 | 4 |
placenta | 7.03e-10 | 2 |
chorion | 7.03e-10 | 2 |
allantois | 7.03e-10 | 2 |
internal female genitalia | 8.33e-09 | 5 |
internal genitalia | 3.40e-08 | 9 |
kidney | 3.72e-08 | 14 |
kidney mesenchyme | 3.72e-08 | 14 |
upper urinary tract | 3.72e-08 | 14 |
kidney rudiment | 3.72e-08 | 14 |
kidney field | 3.72e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.