FFCP PHASE1:Mm9::chr11:52045386..52045399,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2680|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:52045386..52045399,-|id=chr11:52045386..52045399,-|ontology_enrichment_celltype=CL:0002563!6.38e-11!9;CL:0002251!6.38e-11!9;CL:0000066!7.97e-09!25;CL:0000075!1.40e-08!7;CL:0000239!8.18e-08!6;CL:0000677!8.18e-08!6;CL:0000212!8.18e-08!6;CL:0000584!8.18e-08!6;CL:0000063!2.16e-07!66|ontology_enrichment_celltype_v019_2=CL:0002563,7.14e-32,9;CL:0002251,7.14e-32,9;CL:0000239,2.03e-19,6;CL:0000677,2.03e-19,6;CL:0000584,2.03e-19,6;CL:0002076,9.72e-19,15;CL:0000223,1.76e-17,20;CL:0000066,6.33e-17,25;CL:0000075,1.25e-16,7;CL:0002250,3.29e-14,3;CL:0000624,1.24e-08,8;CL:0000791,1.08e-07,9;CL:0000789,1.08e-07,9;CL:0002420,1.08e-07,9;CL:0002419,1.08e-07,9;CL:0000790,1.08e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,5.27e-07,6|ontology_enrichment_uberon=UBERON:0000485!1.93e-12!11;UBERON:0003350!6.38e-11!9;UBERON:0004808!6.38e-11!9;UBERON:0001277!6.38e-11!9;UBERON:0001242!1.70e-09!13;UBERON:0000060!1.70e-09!13;UBERON:0001262!1.70e-09!13;UBERON:0004786!1.70e-09!13;UBERON:0000344!5.51e-09!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.14e-32,9;UBERON:0004808,7.14e-32,9;UBERON:0001277,7.14e-32,9;UBERON:0000485,6.59e-26,11;UBERON:0001242,8.97e-22,13;UBERON:0001262,8.97e-22,13;UBERON:0004786,8.97e-22,13;UBERON:0000344,9.72e-19,15;UBERON:0004923,2.52e-11,24;UBERON:0000490,2.07e-09,66;UBERON:0000160,1.58e-08,31;UBERON:0003929,2.99e-08,55|phase1_expression=0.480446541314382,2.44282785347553,4.09499315450582,6.95667686005709,7.01254021924886,2.35030980676646,0.934450562382103,1.93684985162364,0.140788722151667,0,0,0.0797721589953364,1.19840510951844,1.48614684112296,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,0.850432901510698,0,0,0.159992422793407,0,2.29692785646008,0.86152399231815,0.861884930743556,0.190023419456374,0,0.221730510655305,1.90509202037889,0.61506478758457,0,3.46621943701529,1.49611180822643,5.10423390655923,1.25559489221072,2.3440060335714,0,1.76469446409304,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,1.45072428402269,0.672187598284928,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.76823835312181,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,7.89170114157866,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,4.32045009386798,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:52045386..52045399,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2680 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:52045386..52045399,- | |||
|id=chr11:52045386..52045399,- | |||
|ontology_enrichment_celltype=CL:0002563!6.38e-11!9;CL:0002251!6.38e-11!9;CL:0000066!7.97e-09!25;CL:0000075!1.40e-08!7;CL:0000239!8.18e-08!6;CL:0000677!8.18e-08!6;CL:0000212!8.18e-08!6;CL:0000584!8.18e-08!6;CL:0000063!2.16e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.14e-32,9;CL:0002251,7.14e-32,9;CL:0000239,2.03e-19,6;CL:0000677,2.03e-19,6;CL:0000584,2.03e-19,6;CL:0002076,9.72e-19,15;CL:0000223,1.76e-17,20;CL:0000066,6.33e-17,25;CL:0000075,1.25e-16,7;CL:0002250,3.29e-14,3;CL:0000624,1.24e-08,8;CL:0000791,1.08e-07,9;CL:0000789,1.08e-07,9;CL:0002420,1.08e-07,9;CL:0002419,1.08e-07,9;CL:0000790,1.08e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.27e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!1.93e-12!11;UBERON:0003350!6.38e-11!9;UBERON:0004808!6.38e-11!9;UBERON:0001277!6.38e-11!9;UBERON:0001242!1.70e-09!13;UBERON:0000060!1.70e-09!13;UBERON:0001262!1.70e-09!13;UBERON:0004786!1.70e-09!13;UBERON:0000344!5.51e-09!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.14e-32,9;UBERON:0004808,7.14e-32,9;UBERON:0001277,7.14e-32,9;UBERON:0000485,6.59e-26,11;UBERON:0001242,8.97e-22,13;UBERON:0001262,8.97e-22,13;UBERON:0004786,8.97e-22,13;UBERON:0000344,9.72e-19,15;UBERON:0004923,2.52e-11,24;UBERON:0000490,2.07e-09,66;UBERON:0000160,1.58e-08,31;UBERON:0003929,2.99e-08,55 | |||
|phase1_expression=0.480446541314382,2.44282785347553,4.09499315450582,6.95667686005709,7.01254021924886,2.35030980676646,0.934450562382103,1.93684985162364,0.140788722151667,0,0,0.0797721589953364,1.19840510951844,1.48614684112296,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,0.850432901510698,0,0,0.159992422793407,0,2.29692785646008,0.86152399231815,0.861884930743556,0.190023419456374,0,0.221730510655305,1.90509202037889,0.61506478758457,0,3.46621943701529,1.49611180822643,5.10423390655923,1.25559489221072,2.3440060335714,0,1.76469446409304,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,1.45072428402269,0.672187598284928,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.76823835312181,0,0.679971333707751,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0.621339313086926,7.89170114157866,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,4.32045009386798,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:52045386..52045399,- | |||
}} |
Revision as of 19:53, 12 September 2013
Short description: | p@chr11:52045386..52045399, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:52045386..52045399, - |
Coexpression cluster: | MCL_coexpression_mm9:2680 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.14e-32 | 9 |
epithelial cell of alimentary canal | 7.14e-32 | 9 |
brush border epithelial cell | 2.03e-19 | 6 |
gut absorptive cell | 2.03e-19 | 6 |
enterocyte | 2.03e-19 | 6 |
endo-epithelial cell | 9.72e-19 | 15 |
endodermal cell | 1.76e-17 | 20 |
epithelial cell | 6.33e-17 | 25 |
columnar/cuboidal epithelial cell | 1.25e-16 | 7 |
intestinal crypt stem cell | 3.29e-14 | 3 |
CD4-positive, alpha-beta T cell | 1.24e-08 | 8 |
mature alpha-beta T cell | 1.08e-07 | 9 |
alpha-beta T cell | 1.08e-07 | 9 |
immature T cell | 1.08e-07 | 9 |
mature T cell | 1.08e-07 | 9 |
immature alpha-beta T cell | 1.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.14e-32 | 9 |
gastrointestinal system epithelium | 7.14e-32 | 9 |
intestinal epithelium | 7.14e-32 | 9 |
simple columnar epithelium | 6.59e-26 | 11 |
intestinal mucosa | 8.97e-22 | 13 |
wall of intestine | 8.97e-22 | 13 |
gastrointestinal system mucosa | 8.97e-22 | 13 |
mucosa | 9.72e-19 | 15 |
organ component layer | 2.52e-11 | 24 |
unilaminar epithelium | 2.07e-09 | 66 |
intestine | 1.58e-08 | 31 |
gut epithelium | 2.99e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.27e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.