FFCP PHASE1:Mm9::chr11:121066244..121066291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=66179|HGNC=|MCL_coexpression_id=24|UniProt=Q9D136|association_with_transcript=-219bp_to_ENSMUST00000026169_5end|description=CAGE_peak_2_at_1110031I02Rik_5end|id=chr11:121066244..121066291,-|ontology_enrichment_celltype=CL:0002563!5.00e-07!9;CL:0002251!5.00e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.60e-11,9;CL:0002251,5.60e-11,9;CL:0000239,8.97e-11,6;CL:0000677,8.97e-11,6;CL:0000584,8.97e-11,6;CL:0000075,4.44e-09,7;CL:0000066,2.93e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.19e-11!43;UBERON:0000344!2.97e-11!15;UBERON:0001242!6.88e-10!13;UBERON:0000060!6.88e-10!13;UBERON:0001262!6.88e-10!13;UBERON:0004786!6.88e-10!13;UBERON:0005409!7.81e-10!59;UBERON:0003350!5.00e-07!9;UBERON:0004808!5.00e-07!9;UBERON:0001277!5.00e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.97e-34,31;UBERON:0005409,1.02e-24,47;UBERON:0000344,6.97e-20,15;UBERON:0001242,5.51e-17,13;UBERON:0001262,5.51e-17,13;UBERON:0004786,5.51e-17,13;UBERON:0001007,1.68e-13,116;UBERON:0001555,1.68e-13,116;UBERON:0007026,1.68e-13,116;UBERON:0004119,4.33e-13,118;UBERON:0000925,4.33e-13,118;UBERON:0006595,4.33e-13,118;UBERON:0004921,6.84e-12,114;UBERON:0003350,5.60e-11,9;UBERON:0004808,5.60e-11,9;UBERON:0001277,5.60e-11,9;UBERON:0004923,6.00e-11,24;UBERON:0000485,1.14e-08,11;UBERON:0002108,1.15e-07,4|phase1_expression=0.160148847104794,14.6569671208532,12.739978702907,33.2710632437513,49.5886772646884,4.8684988854448,4.90586545250604,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0,5.75972722056264,7.57050627521661,12.6331032105304,13.7843838770904,11.8509177977239,19.3823887845501,14.617747526076,4.21287970245079,0,0,0,1.44425809875637,0.831173226792462,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,0,0,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0,0,0,0.638436690425939,0.46081959976873,0,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0.186399445825301,0,0,0,2.58127163094416,0,2.69851595818909,0,0.896053774194671,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0,0,5.02409070763864,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0.988779870937496,0,0,0,0,0,5.59175283654366,0,0.209446706813455,6.89734049063197,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0,0.41557608911912,0.162241263067758,0.101839363850316,0.248813941220186,0,0.841767423545896,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,8.26046957459495,5.55346189993443,0,0,0.515469845288373,3.22693639397348,3.7804267453628,4.1849637744763,9.49058123089023,10.2113351928887,6.28338022000674,5.96869416123452,5.26403035221624,5.39291645192533,4.10662294761919,7.96565093017469,0.189667900953082,0.685491075658373,0,0.610953983535943,1.74557238450863,1.47285221769669,3.85742876457969,5.75679577120448,6.75094529717912,4.68909222902842,0,0.333690211432188,0.982794975566015,0.449724224769707,0.811440485554012,1.4470629585145,0.50925170356284,0.575392274901621,1.78348749452539,0.549122826376163,14.3768206527355,2.23284568601102,2.18426371180192,1.26289438973556,0.538192240565737,1.92977408545347,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0,0,10.2018292820448,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.418176592028937,1.52853794622324,0.134864346384821,1.32245529160537,0.26175594198403,5.83267379813068,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.576226371643824,0.17230640686684,1.42888107384922,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0.726732083161643,0.376437521661322,0.676916863133412,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0|short_description=p2@1110031I02Rik}} | ||
|EntrezGene=66179 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q9D136 | |||
|association_with_transcript=-219bp_to_ENSMUST00000026169_5end | |||
|description=CAGE_peak_2_at_1110031I02Rik_5end | |||
|id=chr11:121066244..121066291,- | |||
|ontology_enrichment_celltype=CL:0002563!5.00e-07!9;CL:0002251!5.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.60e-11,9;CL:0002251,5.60e-11,9;CL:0000239,8.97e-11,6;CL:0000677,8.97e-11,6;CL:0000584,8.97e-11,6;CL:0000075,4.44e-09,7;CL:0000066,2.93e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.19e-11!43;UBERON:0000344!2.97e-11!15;UBERON:0001242!6.88e-10!13;UBERON:0000060!6.88e-10!13;UBERON:0001262!6.88e-10!13;UBERON:0004786!6.88e-10!13;UBERON:0005409!7.81e-10!59;UBERON:0003350!5.00e-07!9;UBERON:0004808!5.00e-07!9;UBERON:0001277!5.00e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.97e-34,31;UBERON:0005409,1.02e-24,47;UBERON:0000344,6.97e-20,15;UBERON:0001242,5.51e-17,13;UBERON:0001262,5.51e-17,13;UBERON:0004786,5.51e-17,13;UBERON:0001007,1.68e-13,116;UBERON:0001555,1.68e-13,116;UBERON:0007026,1.68e-13,116;UBERON:0004119,4.33e-13,118;UBERON:0000925,4.33e-13,118;UBERON:0006595,4.33e-13,118;UBERON:0004921,6.84e-12,114;UBERON:0003350,5.60e-11,9;UBERON:0004808,5.60e-11,9;UBERON:0001277,5.60e-11,9;UBERON:0004923,6.00e-11,24;UBERON:0000485,1.14e-08,11;UBERON:0002108,1.15e-07,4 | |||
|phase1_expression=0.160148847104794,14.6569671208532,12.739978702907,33.2710632437513,49.5886772646884,4.8684988854448,4.90586545250604,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0,5.75972722056264,7.57050627521661,12.6331032105304,13.7843838770904,11.8509177977239,19.3823887845501,14.617747526076,4.21287970245079,0,0,0,1.44425809875637,0.831173226792462,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,0,0,0,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0,0,0,0.638436690425939,0.46081959976873,0,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0.186399445825301,0,0,0,2.58127163094416,0,2.69851595818909,0,0.896053774194671,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0,0,5.02409070763864,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0.988779870937496,0,0,0,0,0,5.59175283654366,0,0.209446706813455,6.89734049063197,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0,0.41557608911912,0.162241263067758,0.101839363850316,0.248813941220186,0,0.841767423545896,0,0,0.360124259610698,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,8.26046957459495,5.55346189993443,0,0,0.515469845288373,3.22693639397348,3.7804267453628,4.1849637744763,9.49058123089023,10.2113351928887,6.28338022000674,5.96869416123452,5.26403035221624,5.39291645192533,4.10662294761919,7.96565093017469,0.189667900953082,0.685491075658373,0,0.610953983535943,1.74557238450863,1.47285221769669,3.85742876457969,5.75679577120448,6.75094529717912,4.68909222902842,0,0.333690211432188,0.982794975566015,0.449724224769707,0.811440485554012,1.4470629585145,0.50925170356284,0.575392274901621,1.78348749452539,0.549122826376163,14.3768206527355,2.23284568601102,2.18426371180192,1.26289438973556,0.538192240565737,1.92977408545347,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,1.55056975900933,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.42366414172764,0.441056796109924,0,0,0.0603129249281559,0,0,10.2018292820448,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.418176592028937,1.52853794622324,0.134864346384821,1.32245529160537,0.26175594198403,5.83267379813068,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.576226371643824,0.17230640686684,1.42888107384922,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0,0.177475806159338,0.715308569841963,0.726732083161643,0.376437521661322,0.676916863133412,0,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@1110031I02Rik | |||
}} |
Revision as of 19:09, 12 September 2013
Short description: | p2@1110031I02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1110031I02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -219bp_to_ENSMUST00000026169_5end |
EntrezGene: | 1110031I02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.60e-11 | 9 |
epithelial cell of alimentary canal | 5.60e-11 | 9 |
brush border epithelial cell | 8.97e-11 | 6 |
gut absorptive cell | 8.97e-11 | 6 |
enterocyte | 8.97e-11 | 6 |
columnar/cuboidal epithelial cell | 4.44e-09 | 7 |
epithelial cell | 2.93e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.97e-34 | 31 |
gastrointestinal system | 1.02e-24 | 47 |
mucosa | 6.97e-20 | 15 |
intestinal mucosa | 5.51e-17 | 13 |
wall of intestine | 5.51e-17 | 13 |
gastrointestinal system mucosa | 5.51e-17 | 13 |
digestive system | 1.68e-13 | 116 |
digestive tract | 1.68e-13 | 116 |
primitive gut | 1.68e-13 | 116 |
endoderm-derived structure | 4.33e-13 | 118 |
endoderm | 4.33e-13 | 118 |
presumptive endoderm | 4.33e-13 | 118 |
subdivision of digestive tract | 6.84e-12 | 114 |
epithelium of mucosa | 5.60e-11 | 9 |
gastrointestinal system epithelium | 5.60e-11 | 9 |
intestinal epithelium | 5.60e-11 | 9 |
organ component layer | 6.00e-11 | 24 |
simple columnar epithelium | 1.14e-08 | 11 |
small intestine | 1.15e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.