FFCP PHASE1:Mm9::chr11:117643520..117643535,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217353|HGNC=|UniProt=B1ATB7|association_with_transcript=-8bp_to_ENSMUST00000152304_5end|description=CAGE_peak_6_at_Tmc6_5end|id=chr11:117643520..117643535,-|ontology_enrichment_celltype=CL:0002031!2.38e-12!25;CL:0000988!1.34e-11!32;CL:0002032!1.34e-11!32;CL:0000037!1.34e-11!32;CL:0000566!1.34e-11!32;CL:0000837!1.34e-11!32;CL:0000542!1.77e-08!13;CL:0000051!1.77e-08!13;CL:0000838!2.09e-08!12;CL:0000050!5.91e-08!9;CL:0000084!1.50e-07!11;CL:0000827!1.50e-07!11;CL:0002320!2.58e-07!46;CL:0000134!2.58e-07!46|ontology_enrichment_celltype_v019_2=CL:0002031,6.00e-15,25;CL:0000988,6.02e-11,32;CL:0002032,6.02e-11,32;CL:0000037,6.02e-11,32;CL:0000837,6.02e-11,32;CL:0000838,1.90e-10,12;CL:0000542,1.55e-09,13;CL:0000051,1.55e-09,13;CL:0000050,2.47e-09,9;CL:0000084,1.33e-08,11;CL:0000827,1.33e-08,11;CL:0000764,1.93e-08,3;CL:0000765,1.93e-08,3;CL:0000038,1.93e-08,3;CL:0000547,1.93e-08,3;CL:0002320,7.90e-08,46;CL:0000134,7.90e-08,46;CL:0000738,5.68e-07,17;CL:0002087,5.68e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,5.20e-10,6;DOID:2531,1.93e-08,3;DOID:0060083,1.93e-08,3;DOID:1240,1.93e-08,3|ontology_enrichment_uberon=UBERON:0002193!2.13e-16!48;UBERON:0002405!3.07e-16!70;UBERON:0002390!9.09e-15!45;UBERON:0003061!9.09e-15!45;UBERON:0004177!1.16e-13!29;UBERON:0005057!1.43e-12!51;UBERON:0003408!3.01e-10!24;UBERON:0002370!8.62e-10!23;UBERON:0000974!8.62e-10!23;UBERON:0004807!8.62e-10!23;UBERON:0005058!8.62e-10!23;UBERON:0003351!8.62e-10!23;UBERON:0009113!8.62e-10!23;UBERON:0003295!8.62e-10!23;UBERON:0009722!8.62e-10!23;UBERON:0005562!8.62e-10!23;UBERON:0007690!8.62e-10!23;UBERON:0006562!4.65e-09!24;UBERON:0001557!4.65e-09!24;UBERON:0001042!4.65e-09!24;UBERON:0008814!4.65e-09!24;UBERON:0009145!4.65e-09!24;UBERON:0003081!9.07e-08!88;UBERON:0002384!2.58e-07!46;UBERON:0000072!3.16e-07!27;UBERON:0002368!6.68e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.17e-14,29;UBERON:0005057,5.17e-14,29;UBERON:0002193,5.62e-14,48;UBERON:0002405,5.62e-14,48;UBERON:0002390,1.11e-13,45;UBERON:0003061,1.11e-13,45;UBERON:0000077,5.32e-11,35;UBERON:0002370,1.31e-09,23;UBERON:0000974,1.31e-09,23;UBERON:0004807,1.31e-09,23;UBERON:0005058,1.31e-09,23;UBERON:0003351,1.31e-09,23;UBERON:0009113,1.31e-09,23;UBERON:0003295,1.31e-09,23;UBERON:0009722,1.31e-09,23;UBERON:0005562,1.31e-09,23;UBERON:0007690,1.31e-09,23;UBERON:0006562,4.13e-09,24;UBERON:0003408,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0000072,7.67e-08,27;UBERON:0002384,7.90e-08,46|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.281577444303333,0.70219357896598,0.513653904676515,0.319088635981346,1.71200729931206,1.57356724354195,0.999329285446988,0.809901069559304,0.699561878128147,2.5236973228659,1.64537320326887,3.39511721438424,0.0850432901510698,2.08510997521859,1.04479915655574,1.27993938234725,0.91763712426868,0,0,0,0,0,0,3.81018404075779,9.84103660135312,15.8481681015439,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,4.1176204162171,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,5.03347818173209,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0,0,0.144599356919912,0,0.323533699894818,1.32504911076236,1.45462575940567,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.870848794270651,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.01430060694251,0.482354319504834,0,0.863088412352432,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0.631016438832513,1.56175497718655,1.07711698866399,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,1.75353514746787,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.87957968877638,0.619160603889667,0.925972636848558,1.88368457004691,1.77702496037333,2.0590035588587,0.339956859987711,0.139951452323658,0.829199842826543,0,0,0,0,0.418176592028937,0,0,0,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0,0.469428954583016,0,0.104859344425711,0,0,0.632022241256357,0.202725215290164,0.513554785824136,0.649604114888975,1.43221356533985,0.39736270956253,1.68273629327956,1.47689527174577,2.01932899896295,4.11516755936999,2.62148081355785,2.0466154955348,2.69393156592922,4.32444538071805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0.463735671240843|short_description=p6@Tmc6}} | ||
|EntrezGene=217353 | |||
|HGNC= | |||
|UniProt=B1ATB7 | |||
|association_with_transcript=-8bp_to_ENSMUST00000152304_5end | |||
|description=CAGE_peak_6_at_Tmc6_5end | |||
|id=chr11:117643520..117643535,- | |||
|ontology_enrichment_celltype=CL:0002031!2.38e-12!25;CL:0000988!1.34e-11!32;CL:0002032!1.34e-11!32;CL:0000037!1.34e-11!32;CL:0000566!1.34e-11!32;CL:0000837!1.34e-11!32;CL:0000542!1.77e-08!13;CL:0000051!1.77e-08!13;CL:0000838!2.09e-08!12;CL:0000050!5.91e-08!9;CL:0000084!1.50e-07!11;CL:0000827!1.50e-07!11;CL:0002320!2.58e-07!46;CL:0000134!2.58e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.00e-15,25;CL:0000988,6.02e-11,32;CL:0002032,6.02e-11,32;CL:0000037,6.02e-11,32;CL:0000837,6.02e-11,32;CL:0000838,1.90e-10,12;CL:0000542,1.55e-09,13;CL:0000051,1.55e-09,13;CL:0000050,2.47e-09,9;CL:0000084,1.33e-08,11;CL:0000827,1.33e-08,11;CL:0000764,1.93e-08,3;CL:0000765,1.93e-08,3;CL:0000038,1.93e-08,3;CL:0000547,1.93e-08,3;CL:0002320,7.90e-08,46;CL:0000134,7.90e-08,46;CL:0000738,5.68e-07,17;CL:0002087,5.68e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.20e-10,6;DOID:2531,1.93e-08,3;DOID:0060083,1.93e-08,3;DOID:1240,1.93e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.13e-16!48;UBERON:0002405!3.07e-16!70;UBERON:0002390!9.09e-15!45;UBERON:0003061!9.09e-15!45;UBERON:0004177!1.16e-13!29;UBERON:0005057!1.43e-12!51;UBERON:0003408!3.01e-10!24;UBERON:0002370!8.62e-10!23;UBERON:0000974!8.62e-10!23;UBERON:0004807!8.62e-10!23;UBERON:0005058!8.62e-10!23;UBERON:0003351!8.62e-10!23;UBERON:0009113!8.62e-10!23;UBERON:0003295!8.62e-10!23;UBERON:0009722!8.62e-10!23;UBERON:0005562!8.62e-10!23;UBERON:0007690!8.62e-10!23;UBERON:0006562!4.65e-09!24;UBERON:0001557!4.65e-09!24;UBERON:0001042!4.65e-09!24;UBERON:0008814!4.65e-09!24;UBERON:0009145!4.65e-09!24;UBERON:0003081!9.07e-08!88;UBERON:0002384!2.58e-07!46;UBERON:0000072!3.16e-07!27;UBERON:0002368!6.68e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.17e-14,29;UBERON:0005057,5.17e-14,29;UBERON:0002193,5.62e-14,48;UBERON:0002405,5.62e-14,48;UBERON:0002390,1.11e-13,45;UBERON:0003061,1.11e-13,45;UBERON:0000077,5.32e-11,35;UBERON:0002370,1.31e-09,23;UBERON:0000974,1.31e-09,23;UBERON:0004807,1.31e-09,23;UBERON:0005058,1.31e-09,23;UBERON:0003351,1.31e-09,23;UBERON:0009113,1.31e-09,23;UBERON:0003295,1.31e-09,23;UBERON:0009722,1.31e-09,23;UBERON:0005562,1.31e-09,23;UBERON:0007690,1.31e-09,23;UBERON:0006562,4.13e-09,24;UBERON:0003408,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0000072,7.67e-08,27;UBERON:0002384,7.90e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.281577444303333,0.70219357896598,0.513653904676515,0.319088635981346,1.71200729931206,1.57356724354195,0.999329285446988,0.809901069559304,0.699561878128147,2.5236973228659,1.64537320326887,3.39511721438424,0.0850432901510698,2.08510997521859,1.04479915655574,1.27993938234725,0.91763712426868,0,0,0,0,0,0,3.81018404075779,9.84103660135312,15.8481681015439,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,4.1176204162171,2.04913645487534,0.971020706062307,0,0,0,0,0,0,0,0,0,5.03347818173209,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0,0,0.144599356919912,0,0.323533699894818,1.32504911076236,1.45462575940567,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.870848794270651,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.01430060694251,0.482354319504834,0,0.863088412352432,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0.631016438832513,1.56175497718655,1.07711698866399,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,1.75353514746787,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.87957968877638,0.619160603889667,0.925972636848558,1.88368457004691,1.77702496037333,2.0590035588587,0.339956859987711,0.139951452323658,0.829199842826543,0,0,0,0,0.418176592028937,0,0,0,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0,0.469428954583016,0,0.104859344425711,0,0,0.632022241256357,0.202725215290164,0.513554785824136,0.649604114888975,1.43221356533985,0.39736270956253,1.68273629327956,1.47689527174577,2.01932899896295,4.11516755936999,2.62148081355785,2.0466154955348,2.69393156592922,4.32444538071805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0.463735671240843 | |||
|short_description=p6@Tmc6 | |||
}} |
Revision as of 18:56, 12 September 2013
Short description: | p6@Tmc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmc6_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENSMUST00000152304_5end |
EntrezGene: | Tmc6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.00e-15 | 25 |
hematopoietic cell | 6.02e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.02e-11 | 32 |
hematopoietic stem cell | 6.02e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.02e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.90e-10 | 12 |
lymphocyte | 1.55e-09 | 13 |
common lymphoid progenitor | 1.55e-09 | 13 |
megakaryocyte-erythroid progenitor cell | 2.47e-09 | 9 |
T cell | 1.33e-08 | 11 |
pro-T cell | 1.33e-08 | 11 |
erythroid lineage cell | 1.93e-08 | 3 |
erythroblast | 1.93e-08 | 3 |
erythroid progenitor cell | 1.93e-08 | 3 |
proerythroblast | 1.93e-08 | 3 |
connective tissue cell | 7.90e-08 | 46 |
mesenchymal cell | 7.90e-08 | 46 |
leukocyte | 5.68e-07 | 17 |
nongranular leukocyte | 5.68e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.17e-14 | 29 |
immune organ | 5.17e-14 | 29 |
hemolymphoid system | 5.62e-14 | 48 |
immune system | 5.62e-14 | 48 |
hematopoietic system | 1.11e-13 | 45 |
blood island | 1.11e-13 | 45 |
mixed endoderm/mesoderm-derived structure | 5.32e-11 | 35 |
thymus | 1.31e-09 | 23 |
neck | 1.31e-09 | 23 |
respiratory system epithelium | 1.31e-09 | 23 |
hemolymphoid system gland | 1.31e-09 | 23 |
pharyngeal epithelium | 1.31e-09 | 23 |
thymic region | 1.31e-09 | 23 |
pharyngeal gland | 1.31e-09 | 23 |
entire pharyngeal arch endoderm | 1.31e-09 | 23 |
thymus primordium | 1.31e-09 | 23 |
early pharyngeal endoderm | 1.31e-09 | 23 |
pharynx | 4.13e-09 | 24 |
gland of gut | 4.13e-09 | 24 |
upper respiratory tract | 4.13e-09 | 24 |
chordate pharynx | 4.13e-09 | 24 |
pharyngeal arch system | 4.13e-09 | 24 |
pharyngeal region of foregut | 4.13e-09 | 24 |
segment of respiratory tract | 7.67e-08 | 27 |
connective tissue | 7.90e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.20e-10 | 6 |
hematologic cancer | 1.93e-08 | 3 |
immune system cancer | 1.93e-08 | 3 |
leukemia | 1.93e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.