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FFCP PHASE1:Mm9::chr11:115337116..115337143,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=276905|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=60bp_to_ENSMUST00000126533_5end|description=CAGE_peak_3_at_Armc7_5end|id=chr11:115337116..115337143,+|ontology_enrichment_celltype=CL:0000988!1.01e-08!32;CL:0002032!1.01e-08!32;CL:0000037!1.01e-08!32;CL:0000566!1.01e-08!32;CL:0000837!1.01e-08!32;CL:0000838!1.59e-08!12;CL:0000542!2.52e-08!13;CL:0000051!2.52e-08!13;CL:0000084!5.09e-08!11;CL:0000827!5.09e-08!11;CL:0000791!4.30e-07!9;CL:0000789!4.30e-07!9;CL:0002420!4.30e-07!9;CL:0002419!4.30e-07!9;CL:0000790!4.30e-07!9;CL:0002320!6.98e-07!46;CL:0000134!6.98e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,2.23e-17,32;CL:0002032,2.23e-17,32;CL:0000037,2.23e-17,32;CL:0000837,2.23e-17,32;CL:0000838,9.08e-13,12;CL:0000084,1.23e-11,11;CL:0000827,1.23e-11,11;CL:0000542,1.34e-11,13;CL:0000051,1.34e-11,13;CL:0002320,1.54e-11,46;CL:0000134,1.54e-11,46;CL:0002031,3.55e-11,25;CL:0000791,1.58e-09,9;CL:0000789,1.58e-09,9;CL:0002420,1.58e-09,9;CL:0002419,1.58e-09,9;CL:0000790,1.58e-09,9;CL:0000219,5.46e-09,54;CL:0000738,2.59e-08,17;CL:0002087,2.59e-08,17;CL:0000624,6.49e-08,8;CL:0000049,1.30e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.23e-16!48;UBERON:0002390!6.54e-15!45;UBERON:0003061!6.54e-15!45;UBERON:0004177!2.12e-12!29;UBERON:0002370!5.32e-12!23;UBERON:0000974!5.32e-12!23;UBERON:0004807!5.32e-12!23;UBERON:0005058!5.32e-12!23;UBERON:0003351!5.32e-12!23;UBERON:0009113!5.32e-12!23;UBERON:0003295!5.32e-12!23;UBERON:0009722!5.32e-12!23;UBERON:0005562!5.32e-12!23;UBERON:0007690!5.32e-12!23;UBERON:0006562!6.37e-12!24;UBERON:0001557!6.37e-12!24;UBERON:0001042!6.37e-12!24;UBERON:0008814!6.37e-12!24;UBERON:0009145!6.37e-12!24;UBERON:0003408!5.03e-11!24;UBERON:0002405!1.39e-10!70;UBERON:0000072!2.47e-09!27;UBERON:0000065!7.82e-08!41;UBERON:0003081!9.82e-08!88;UBERON:0001004!2.37e-07!42;UBERON:0000063!3.61e-07!35;UBERON:0002384!6.98e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.43e-31,48;UBERON:0002405,8.43e-31,48;UBERON:0002390,4.73e-27,45;UBERON:0003061,4.73e-27,45;UBERON:0002370,8.79e-23,23;UBERON:0000974,8.79e-23,23;UBERON:0004807,8.79e-23,23;UBERON:0005058,8.79e-23,23;UBERON:0003351,8.79e-23,23;UBERON:0009113,8.79e-23,23;UBERON:0003295,8.79e-23,23;UBERON:0009722,8.79e-23,23;UBERON:0005562,8.79e-23,23;UBERON:0007690,8.79e-23,23;UBERON:0004177,1.80e-22,29;UBERON:0005057,1.80e-22,29;UBERON:0006562,1.34e-21,24;UBERON:0003408,1.34e-21,24;UBERON:0001557,1.34e-21,24;UBERON:0001042,1.34e-21,24;UBERON:0008814,1.34e-21,24;UBERON:0009145,1.34e-21,24;UBERON:0000072,1.38e-18,27;UBERON:0000077,1.52e-17,35;UBERON:0007811,1.35e-12,36;UBERON:0002384,1.54e-11,46;UBERON:0000065,1.98e-10,41;UBERON:0001004,4.63e-10,42;UBERON:0003081,5.61e-10,87;UBERON:0000153,1.04e-09,43;UBERON:0000926,7.00e-08,120;UBERON:0004120,7.00e-08,120;UBERON:0006603,7.00e-08,120;UBERON:0000490,3.55e-07,66|phase1_expression=0,0,0,0.30246421130683,0,0,0,11.3628524628587,1.83025338797167,5.61754863172784,0.856089841127525,0.797721589953364,13.8672591244277,16.8721376668665,1.66554880907831,1.41732687172878,0,2.99689057090326,4.11343300817216,1.27316895539409,0.510259740906419,1.68794617041505,1.82839852397255,1.43993180514066,2.06468352960453,0,0,0,0.570070258369122,1.51218077855958,0.886922042621219,0,0,0,0,0.166234645358492,0,11.7188856606334,6.2506827561904,13.6116173433188,7.64700934440319,2.73218193983378,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,0,2.01339127269284,27.5637613964311,32.2650047176765,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0.79928715803342,7.25026074212081,1.1875371125186,0,0.304465478312141,0,0,0.587943535678524,0,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,0.209446706813455,2.04365644166873,5.03223522924865,2.99951365496704,3.68503658511888,0,0,0.125654352112864,0,0,0,0,0.712875546952214,0.248813941220186,0.758168275301024,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0,0,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,6.43369767786788,4.54661599032948,0,0,0,0.473489471170421,0,0,0,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0,0.658650345873152,0,0,0,4.29544417878937,1.32225283331772,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0,0.596869416123452,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0,0.420814919341911,0.0632365371242573,0.295220295959204,0,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.312037673114561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|EntrezGene=276905
|HGNC=
|MCL_coexpression_id=36
|UniProt=
|association_with_transcript=60bp_to_ENSMUST00000126533_5end
|description=CAGE_peak_3_at_Armc7_5end
|id=chr11:115337116..115337143,+
|ontology_enrichment_celltype=CL:0000988!1.01e-08!32;CL:0002032!1.01e-08!32;CL:0000037!1.01e-08!32;CL:0000566!1.01e-08!32;CL:0000837!1.01e-08!32;CL:0000838!1.59e-08!12;CL:0000542!2.52e-08!13;CL:0000051!2.52e-08!13;CL:0000084!5.09e-08!11;CL:0000827!5.09e-08!11;CL:0000791!4.30e-07!9;CL:0000789!4.30e-07!9;CL:0002420!4.30e-07!9;CL:0002419!4.30e-07!9;CL:0000790!4.30e-07!9;CL:0002320!6.98e-07!46;CL:0000134!6.98e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000988,2.23e-17,32;CL:0002032,2.23e-17,32;CL:0000037,2.23e-17,32;CL:0000837,2.23e-17,32;CL:0000838,9.08e-13,12;CL:0000084,1.23e-11,11;CL:0000827,1.23e-11,11;CL:0000542,1.34e-11,13;CL:0000051,1.34e-11,13;CL:0002320,1.54e-11,46;CL:0000134,1.54e-11,46;CL:0002031,3.55e-11,25;CL:0000791,1.58e-09,9;CL:0000789,1.58e-09,9;CL:0002420,1.58e-09,9;CL:0002419,1.58e-09,9;CL:0000790,1.58e-09,9;CL:0000219,5.46e-09,54;CL:0000738,2.59e-08,17;CL:0002087,2.59e-08,17;CL:0000624,6.49e-08,8;CL:0000049,1.30e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.23e-16!48;UBERON:0002390!6.54e-15!45;UBERON:0003061!6.54e-15!45;UBERON:0004177!2.12e-12!29;UBERON:0002370!5.32e-12!23;UBERON:0000974!5.32e-12!23;UBERON:0004807!5.32e-12!23;UBERON:0005058!5.32e-12!23;UBERON:0003351!5.32e-12!23;UBERON:0009113!5.32e-12!23;UBERON:0003295!5.32e-12!23;UBERON:0009722!5.32e-12!23;UBERON:0005562!5.32e-12!23;UBERON:0007690!5.32e-12!23;UBERON:0006562!6.37e-12!24;UBERON:0001557!6.37e-12!24;UBERON:0001042!6.37e-12!24;UBERON:0008814!6.37e-12!24;UBERON:0009145!6.37e-12!24;UBERON:0003408!5.03e-11!24;UBERON:0002405!1.39e-10!70;UBERON:0000072!2.47e-09!27;UBERON:0000065!7.82e-08!41;UBERON:0003081!9.82e-08!88;UBERON:0001004!2.37e-07!42;UBERON:0000063!3.61e-07!35;UBERON:0002384!6.98e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.43e-31,48;UBERON:0002405,8.43e-31,48;UBERON:0002390,4.73e-27,45;UBERON:0003061,4.73e-27,45;UBERON:0002370,8.79e-23,23;UBERON:0000974,8.79e-23,23;UBERON:0004807,8.79e-23,23;UBERON:0005058,8.79e-23,23;UBERON:0003351,8.79e-23,23;UBERON:0009113,8.79e-23,23;UBERON:0003295,8.79e-23,23;UBERON:0009722,8.79e-23,23;UBERON:0005562,8.79e-23,23;UBERON:0007690,8.79e-23,23;UBERON:0004177,1.80e-22,29;UBERON:0005057,1.80e-22,29;UBERON:0006562,1.34e-21,24;UBERON:0003408,1.34e-21,24;UBERON:0001557,1.34e-21,24;UBERON:0001042,1.34e-21,24;UBERON:0008814,1.34e-21,24;UBERON:0009145,1.34e-21,24;UBERON:0000072,1.38e-18,27;UBERON:0000077,1.52e-17,35;UBERON:0007811,1.35e-12,36;UBERON:0002384,1.54e-11,46;UBERON:0000065,1.98e-10,41;UBERON:0001004,4.63e-10,42;UBERON:0003081,5.61e-10,87;UBERON:0000153,1.04e-09,43;UBERON:0000926,7.00e-08,120;UBERON:0004120,7.00e-08,120;UBERON:0006603,7.00e-08,120;UBERON:0000490,3.55e-07,66
|phase1_expression=0,0,0,0.30246421130683,0,0,0,11.3628524628587,1.83025338797167,5.61754863172784,0.856089841127525,0.797721589953364,13.8672591244277,16.8721376668665,1.66554880907831,1.41732687172878,0,2.99689057090326,4.11343300817216,1.27316895539409,0.510259740906419,1.68794617041505,1.82839852397255,1.43993180514066,2.06468352960453,0,0,0,0.570070258369122,1.51218077855958,0.886922042621219,0,0,0,0,0.166234645358492,0,11.7188856606334,6.2506827561904,13.6116173433188,7.64700934440319,2.73218193983378,6.311634589405,0,0,0,0,0,0,0,0.139986421625363,0,2.01339127269284,27.5637613964311,32.2650047176765,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0.79928715803342,7.25026074212081,1.1875371125186,0,0.304465478312141,0,0,0.587943535678524,0,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,0.209446706813455,2.04365644166873,5.03223522924865,2.99951365496704,3.68503658511888,0,0,0.125654352112864,0,0,0,0,0.712875546952214,0.248813941220186,0.758168275301024,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0,0,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,6.43369767786788,4.54661599032948,0,0,0,0.473489471170421,0,0,0,0,0.467061369468678,0,0.164167464079095,0.0810688095458557,0,0.658650345873152,0,0,0,4.29544417878937,1.32225283331772,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0,0.596869416123452,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0,0.420814919341911,0.0632365371242573,0.295220295959204,0,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.923765950833023,0,0,0.169745085775188,0,0.167506257441816,0,0,0.315270288212382,0.664394068946325,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0.54390568381871,0,0.827810238914197,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.164549020602121,0.608929898229199,0.469343416127421,0,0,0.98931751764888,0.645857706783622,0.180938774784468,0.119372344003136,0,0.291480836629851,0,1.02522528478712,0.206386867963223,0,0.376736914009382,1.0935538217682,1.60144721244566,3.22959016988325,5.45810664062266,4.56059913554598,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.704143431874524,0.651021924219751,0.209718688851422,0,0,9.48033361884535,1.62180172232131,3.08132871494482,4.15746633528944,1.9692936523423,4.37098980518783,6.25016337503838,4.43068581523732,6.25991989678515,7.69688747215498,6.55370203389463,6.1398464866044,7.02346443974405,10.2851673919781,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0.549454872801795,0,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0,0.282328141245992,0.0846146078916765,0.548783918618318,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.429742108096597,0.382576664137687,0.220591419119515,0
|short_description=p3@Armc7
}}

Revision as of 18:46, 12 September 2013

Short description:p3@Armc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Armc7_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 60bp_to_ENSMUST00000126533_5end
EntrezGene:Armc7
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Armc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D37.70
thymus, neonate N10.CNhs11194.748-24E46.55
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G77.02
thymus, neonate N30.CNhs11132.1393-42G210.29
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system8.43e-3148
immune system8.43e-3148
hematopoietic system4.73e-2745
blood island4.73e-2745
thymus8.79e-2323
neck8.79e-2323
respiratory system epithelium8.79e-2323
hemolymphoid system gland8.79e-2323
pharyngeal epithelium8.79e-2323
thymic region8.79e-2323
pharyngeal gland8.79e-2323
entire pharyngeal arch endoderm8.79e-2323
thymus primordium8.79e-2323
early pharyngeal endoderm8.79e-2323
hemopoietic organ1.80e-2229
immune organ1.80e-2229
pharynx1.34e-2124
gland of gut1.34e-2124
upper respiratory tract1.34e-2124
chordate pharynx1.34e-2124
pharyngeal arch system1.34e-2124
pharyngeal region of foregut1.34e-2124
segment of respiratory tract1.38e-1827
mixed endoderm/mesoderm-derived structure1.52e-1735
craniocervical region1.35e-1236
connective tissue1.54e-1146
respiratory tract1.98e-1041
respiratory system4.63e-1042
lateral plate mesoderm5.61e-1087
anterior region of body1.04e-0943
mesoderm7.00e-08120
mesoderm-derived structure7.00e-08120
presumptive mesoderm7.00e-08120
unilaminar epithelium3.55e-0766







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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