FFCP PHASE1:Mm9::chr11:114995269..114995280,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=246746|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=24bp_to_ENSMUST00000146254_5end|description=CAGE_peak_3_at_Cd300lf_5end|id=chr11:114995269..114995280,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,3.99e-09,3;CL:0002540,3.99e-09,3;CL:0002027,6.07e-08,3;CL:0002006,6.07e-08,3;CL:0002024,6.07e-08,3;CL:0000553,7.82e-07,6;CL:0000556,7.82e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.21e-09,3;DOID:4045,1.21e-09,3|ontology_enrichment_uberon=UBERON:0002193!2.47e-10!48;UBERON:0002405!3.99e-10!70;UBERON:0002390!1.55e-08!45;UBERON:0003061!1.55e-08!45;UBERON:0002204!2.22e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-12,16;UBERON:0002204,1.44e-11,32;UBERON:0002193,1.42e-10,48;UBERON:0002405,1.42e-10,48;UBERON:0001474,4.30e-10,22;UBERON:0004765,4.30e-10,22;UBERON:0001434,4.30e-10,22;UBERON:0002465,2.28e-08,3;UBERON:0002106,2.25e-07,6;UBERON:0004457,2.25e-07,6;UBERON:0000042,2.25e-07,6;UBERON:0004854,2.25e-07,6;UBERON:0009034,2.25e-07,6;UBERON:0002095,2.25e-07,6;UBERON:0004782,2.25e-07,6;UBERON:0003281,2.25e-07,6;UBERON:0009664,2.25e-07,6;UBERON:0002296,2.25e-07,6;UBERON:0005602,2.25e-07,6;UBERON:0001179,2.25e-07,6;UBERON:0006293,2.25e-07,6;UBERON:0002390,3.03e-07,45;UBERON:0003061,3.03e-07,45|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0.0874204024189974,1.33243904726265,1.21485160433896,1.39912375625629,2.05050407482854,0.411343300817216,0.84877930359606,0,1.09220046320974,1.04479915655574,1.11994695955385,2.06468352960453,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,19.6709866446347,21.8773896466664,23.0350447348471,21.1763335691165,28.6879103682547,18.934903768215,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,6.29929802096979,5.93319817540185,2.8419204597844,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0.445326417194474,0,0,0,0,0.470354828542819,0,0,0.144599356919912,0,0.485300549842228,0.883366073841574,1.45462575940567,0,0,0,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,1.8661045591514,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0.196558995113203,1.12431056192427,0.405720242777006,1.20588579876208,0.25462585178142,0.575392274901621,1.45921704097532,1.09824565275233,0,2.23284568601102,0.936113019343682,0,0,0,2.21703828199926,0,0,0,0,0.335012514883631,0.238043640886014,0.975668239288994,0.945810864637146,1.32878813789265,0.637819074629948,0.983179888294428,1.03610989119537,0.867894351489069,0,6.52686820582452,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0,2.22132145037209,0.412773735926445,3.1483069652851,0.753473828018764,1.91371918809435,2.0590035588587,0,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.480781798079875,0,0.504832249740738,0.0762068066549998,0.504130925684203,0.194915761479505,0.481059208201647,0.584384510907845,0,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0|short_description=p3@Cd300lf}} | ||
|EntrezGene=246746 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENSMUST00000146254_5end | |||
|description=CAGE_peak_3_at_Cd300lf_5end | |||
|id=chr11:114995269..114995280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.99e-09,3;CL:0002540,3.99e-09,3;CL:0002027,6.07e-08,3;CL:0002006,6.07e-08,3;CL:0002024,6.07e-08,3;CL:0000553,7.82e-07,6;CL:0000556,7.82e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.21e-09,3;DOID:4045,1.21e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.47e-10!48;UBERON:0002405!3.99e-10!70;UBERON:0002390!1.55e-08!45;UBERON:0003061!1.55e-08!45;UBERON:0002204!2.22e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.76e-12,16;UBERON:0002204,1.44e-11,32;UBERON:0002193,1.42e-10,48;UBERON:0002405,1.42e-10,48;UBERON:0001474,4.30e-10,22;UBERON:0004765,4.30e-10,22;UBERON:0001434,4.30e-10,22;UBERON:0002465,2.28e-08,3;UBERON:0002106,2.25e-07,6;UBERON:0004457,2.25e-07,6;UBERON:0000042,2.25e-07,6;UBERON:0004854,2.25e-07,6;UBERON:0009034,2.25e-07,6;UBERON:0002095,2.25e-07,6;UBERON:0004782,2.25e-07,6;UBERON:0003281,2.25e-07,6;UBERON:0009664,2.25e-07,6;UBERON:0002296,2.25e-07,6;UBERON:0005602,2.25e-07,6;UBERON:0001179,2.25e-07,6;UBERON:0006293,2.25e-07,6;UBERON:0002390,3.03e-07,45;UBERON:0003061,3.03e-07,45 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0.0874204024189974,1.33243904726265,1.21485160433896,1.39912375625629,2.05050407482854,0.411343300817216,0.84877930359606,0,1.09220046320974,1.04479915655574,1.11994695955385,2.06468352960453,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,19.6709866446347,21.8773896466664,23.0350447348471,21.1763335691165,28.6879103682547,18.934903768215,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,6.29929802096979,5.93319817540185,2.8419204597844,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0.445326417194474,0,0,0,0,0.470354828542819,0,0,0.144599356919912,0,0.485300549842228,0.883366073841574,1.45462575940567,0,0,0,0.510914110417183,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,1.8661045591514,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0.196558995113203,1.12431056192427,0.405720242777006,1.20588579876208,0.25462585178142,0.575392274901621,1.45921704097532,1.09824565275233,0,2.23284568601102,0.936113019343682,0,0,0,2.21703828199926,0,0,0,0,0.335012514883631,0.238043640886014,0.975668239288994,0.945810864637146,1.32878813789265,0.637819074629948,0.983179888294428,1.03610989119537,0.867894351489069,0,6.52686820582452,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0.291480836629851,0,2.22132145037209,0.412773735926445,3.1483069652851,0.753473828018764,1.91371918809435,2.0590035588587,0,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.480781798079875,0,0.504832249740738,0.0762068066549998,0.504130925684203,0.194915761479505,0.481059208201647,0.584384510907845,0,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0 | |||
|short_description=p3@Cd300lf | |||
}} |
Revision as of 18:44, 12 September 2013
Short description: | p3@Cd300lf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd300lf_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 24bp_to_ENSMUST00000146254_5end |
EntrezGene: | Cd300lf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.99e-09 | 3 |
mesenchymal stem cell of the bone marrow | 3.99e-09 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 6.07e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.07e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.07e-08 | 3 |
megakaryocyte progenitor cell | 7.82e-07 | 6 |
megakaryocyte | 7.82e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.76e-12 | 16 |
musculoskeletal system | 1.44e-11 | 32 |
hemolymphoid system | 1.42e-10 | 48 |
immune system | 1.42e-10 | 48 |
bone element | 4.30e-10 | 22 |
skeletal element | 4.30e-10 | 22 |
skeletal system | 4.30e-10 | 22 |
lymphoid system | 2.28e-08 | 3 |
spleen | 2.25e-07 | 6 |
cavity lining | 2.25e-07 | 6 |
serous membrane | 2.25e-07 | 6 |
gastrointestinal system mesentery | 2.25e-07 | 6 |
stomach region | 2.25e-07 | 6 |
mesentery | 2.25e-07 | 6 |
gastrointestinal system serosa | 2.25e-07 | 6 |
mesentery of stomach | 2.25e-07 | 6 |
gut mesentery | 2.25e-07 | 6 |
dorsal mesentery | 2.25e-07 | 6 |
dorsal mesogastrium | 2.25e-07 | 6 |
peritoneal cavity | 2.25e-07 | 6 |
spleen primordium | 2.25e-07 | 6 |
hematopoietic system | 3.03e-07 | 45 |
blood island | 3.03e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.21e-09 | 3 |
muscle cancer | 1.21e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.