FFCP PHASE1:Mm9::chr10:96079632..96079649,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12226|HGNC=|MCL_coexpression_id=102|UniProt=P62325,Q3UEG0|association_with_transcript=0bp_to_ENSMUST00000038377,NM_007569,uc007gww.2_5end|description=CAGE_peak_1_at_Btg1_5end|id=chr10:96079632..96079649,+|ontology_enrichment_celltype=CL:0000063!5.46e-15!66;CL:0000144!3.98e-13!121;CL:0000012!3.98e-13!121;CL:0002371!9.93e-12!118;CL:0000548!2.16e-10!115;CL:0000004!2.16e-10!115;CL:0000255!2.16e-10!115;CL:0000723!8.39e-10!91;CL:0000048!8.39e-10!91;CL:0000034!1.93e-09!97;CL:0002320!3.34e-09!46;CL:0000134!3.34e-09!46;CL:0000066!1.12e-07!25;CL:0000791!2.43e-07!9;CL:0000789!2.43e-07!9;CL:0002420!2.43e-07!9;CL:0002419!2.43e-07!9;CL:0000790!2.43e-07!9;CL:0000219!3.74e-07!54|ontology_enrichment_celltype_v019_2=CL:0000723,8.39e-10,91;CL:0000048,8.39e-10,91;CL:0000034,1.93e-09,97;CL:0002320,3.34e-09,46;CL:0000134,3.34e-09,46;CL:0000066,1.12e-07,25;CL:0000791,2.43e-07,9;CL:0000789,2.43e-07,9;CL:0002420,2.43e-07,9;CL:0002419,2.43e-07,9;CL:0000790,2.43e-07,9;CL:0000219,3.73e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.72e-13!48;UBERON:0002390!5.37e-12!45;UBERON:0003061!5.37e-12!45;UBERON:0002384!3.34e-09!46;UBERON:0002405!4.28e-09!70;UBERON:0000072!1.08e-08!27;UBERON:0004177!1.26e-07!29;UBERON:0006562!2.04e-07!24;UBERON:0001557!2.04e-07!24;UBERON:0001042!2.04e-07!24;UBERON:0008814!2.04e-07!24;UBERON:0009145!2.04e-07!24;UBERON:0002370!2.42e-07!23;UBERON:0000974!2.42e-07!23;UBERON:0004807!2.42e-07!23;UBERON:0005058!2.42e-07!23;UBERON:0003351!2.42e-07!23;UBERON:0009113!2.42e-07!23;UBERON:0003295!2.42e-07!23;UBERON:0009722!2.42e-07!23;UBERON:0005562!2.42e-07!23;UBERON:0007690!2.42e-07!23;UBERON:0000065!3.42e-07!41;UBERON:0003408!4.27e-07!24;UBERON:0001004!4.68e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.72e-13,48;UBERON:0002405,2.72e-13,48;UBERON:0002390,5.37e-12,45;UBERON:0003061,5.37e-12,45;UBERON:0002384,3.34e-09,46;UBERON:0000072,1.08e-08,27;UBERON:0000077,8.00e-08,35;UBERON:0004177,1.26e-07,29;UBERON:0005057,1.26e-07,29;UBERON:0006562,2.04e-07,24;UBERON:0001557,2.04e-07,24;UBERON:0001042,2.04e-07,24;UBERON:0008814,2.04e-07,24;UBERON:0009145,2.04e-07,24;UBERON:0002370,2.41e-07,23;UBERON:0000974,2.41e-07,23;UBERON:0004807,2.41e-07,23;UBERON:0005058,2.41e-07,23;UBERON:0003351,2.41e-07,23;UBERON:0009113,2.41e-07,23;UBERON:0003295,2.41e-07,23;UBERON:0009722,2.41e-07,23;UBERON:0005562,2.41e-07,23;UBERON:0007690,2.41e-07,23;UBERON:0000065,3.42e-07,41;UBERON:0003408,4.27e-07,24;UBERON:0001004,4.68e-07,42|phase1_expression=413.984769765892,234.86044934129,315.314472896948,199.626379462508,209.374415117573,214.885468047219,172.873354040689,1627.98686195139,2476.75520009212,2731.29895765134,622.03487856326,462.51897785496,1516.32486500069,1614.30515106921,287.473724446917,283.060423810977,225.958486635391,1109.6381666476,1021.77675922997,1260.86165549195,143.382987194704,34.652541969109,38.9187685817014,320.78480770078,373.478309577353,267.017863313484,307.13330326142,253.825112103977,235.629040125904,194.819290304426,196.674962951255,0.635030673459631,0,15.8481681015439,177.643746147034,133.320185577511,142.714380027396,739.963923142853,639.132311820469,395.260426700218,1766.45915855714,1578.51811573897,707.874094719422,149.061832483083,164.129251644394,156.014739337429,171.343704412221,53.6341884695898,125.221124158649,109.269603279747,96.1706716566241,135.127410503073,1948.29162154243,2625.81095408107,2172.84641145603,76.6633119387122,104.584705577646,114.479204485592,234.080145214555,226.937130107702,266.209189472595,166.372665245944,132.50492462056,287.967909530048,372.802618687749,315.453171036068,172.86926376912,117.186583123074,210.178844149284,246.790855270331,237.667206327062,107.119119151426,139.368049340468,271.929574257198,249.102379176396,375.960483723499,59.4625757396699,48.0104391200306,47.1572057096667,175.144990105697,153.424778321241,192.217033735444,70.6332987473494,79.9122906244986,69.3704044906718,114.315891163783,106.066902195332,160.862721747234,147.287446033043,132.779231107622,385.809634461933,172.945199273259,740.48878240774,252.041390494861,200.78091299133,138.888335000174,124.433756236732,245.249234189825,329.148867831835,336.732614508354,343.23541399577,370.863519727379,402.5922787365,405.308020797399,316.293410917384,306.818797090344,389.759347106398,180.753081595272,279.135038571651,166.106753613539,118.490478181271,123.004053238105,118.075134595102,117.714382271598,141.459214684253,94.878276453905,164.879043478827,146.045350489111,133.576193344431,120.51630321082,170.931335288345,147.886952206243,113.698974343055,259.696566949242,315.84563387469,161.704315947038,347.823306440687,209.366053116699,263.035370041244,39.3949381634684,44.3775584734068,202.429161253825,38.5889990826854,42.7044813741652,43.0121252238289,41.3715220822782,212.64059171946,176.782305236942,88.9584109686535,47.9807431421161,107.739726773119,145.068227897521,157.554363579681,172.255606786222,213.974789830926,193.836058790978,245.030009723691,91.5809932416116,122.227051992922,138.236544602676,127.212662770535,156.724948685716,201.306208439333,214.175082411132,232.328032004568,154.251556784332,139.03821108802,140.25460937752,214.827605543068,81.1933028339167,91.9342155125897,121.721953547646,137.785436110592,139.702604540657,148.713496823433,131.38167878398,125.820225256421,111.277371275913,90.6724773023277,105.395511938779,74.2590295440039,58.9185949324089,70.0364867778452,76.6318651121723,62.4561147235458,110.210839858214,298.698579817353,178.768583064556,150.36821662734,141.432133163007,109.537342123779,94.186205999101,96.2896929848288,91.6887517862535,135.240782540186,109.030708027295,100.282748311308,117.58327497632,101.771253476181,120.441800759666,210.302322528077,270.433849079431,115.128415878521,94.2550229030263,96.9286526788492,102.843920561884,108.419440326703,135.011453288863,116.418464845758,90.7802410074553,108.957117121914,137.834632100651,56.6224517736454,25.1936109631302,27.5182593158484,24.0602460251793,38.5434230638156,54.5060381040462,86.0635379021199,153.054345123831,228.124264072475,115.315793538994,234.342176639588,161.137030340462,145.409555671385,198.274419188483,89.3399119339123,227.713342083509,241.841925928086,110.284001650422,115.05327336807,114.577932898252,132.834680531292,159.63346334205,168.772941388184,256.795880580863,137.300210516492,142.84472482346,148.930753926093,156.653328868246,157.316018479831,167.358960778809,851.970754256888,711.428634434872,58.0281842162463,95.1981774751327,40.9404004468869,36.335622843583,184.754683439513,84.0728187590562,180.786209725515,162.812956371698,341.876932201952,166.561252172929,209.653552311533,256.467336894682,281.343437664052,281.442391168593,296.465833459893,147.165162921188,138.817403333687,204.241247406342,170.705533402548,155.401855840128,108.85101343877,120.904756805181,114.278304532676,113.351652933295,153.556984298002,128.507891840562,104.146602146793,111.604854949594,114.435658461496,100.499689023589,80.1181425169991,95.9160552208138,115.749465956288,106.416106572504,119.2687064477,114.670313741902,119.172637007608,172.839384256406,149.245961686124,173.849485944436,105.367596920606,177.515275383881,118.20322135746,320.538875718237,331.486468006694,173.218720393664,230.746740958063,208.458942676228,123.587874731057,45.2437736905644,237.510524309015,188.637597318385,194.083864683458,109.63044197673,211.602664512147,222.601162529947,502.62621749183,443.786055318319,443.483715938396,143.200592702267,128.11607740036,140.493751784652,149.479391697373,157.652575194909,173.598238178211,137.831362005287,151.173170521639,137.6836254836,290.337540173616,138.558666818384,271.136303507096,107.203363513533,112.677232001283,107.14260477757,121.28107424559,96.9808160317067,103.509084485555,75.5185432094911,48.6547358135298,46.8673194402452,163.024983541952,357.40857743047,79.4682843937444,93.0561271913335,102.247687683525,141.073036185975,270.20664250252,231.37624032594,253.582918158749,261.705038265599,280.745875717019,336.961110727321,362.835689994098,380.517833687503,454.768026388485,188.412948784241,51.9447130895311,46.6512054369274,42.6426925564759,210.963036683152,181.113588810391,204.397212682268,308.904834252934,131.913463361301,58.7341916321749,55.6993536173684,61.8727154514548,119.609814911207,67.8231694572936,50.6113911251099,52.6517550180809,45.032120322422,53.0176618511519,53.3293121104374,115.722892556357,122.500636134117,114.562249461024,97.7289002614542,121.785247486858,165.643001113463,102.455741516545,106.108054478031,97.23852050632,97.0357293172982,98.6034476573033,91.483775572247,105.253054396148,97.5103071126159,93.0454597080935,120.026010203335,111.596605884896,100.312794641127,100.136873895204,104.216835455153,105.946598987093,112.697136911179,90.8441883699293,107.701694724555,97.3090993494519,99.8452373121783,103.720160618862,97.3357932320019,105.248188230543,88.6604789219227,85.8917531219021,106.680354412735,107.627764353628,104.582367800527,132.526841744044,173.86816224481,149.950161013507,170.607616914349,197.409558695046,128.825388765797,110.600957590941|short_description=p1@Btg1}} | ||
|EntrezGene=12226 | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|UniProt=P62325,Q3UEG0 | |||
|association_with_transcript=0bp_to_ENSMUST00000038377,NM_007569,uc007gww.2_5end | |||
|description=CAGE_peak_1_at_Btg1_5end | |||
|id=chr10:96079632..96079649,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.46e-15!66;CL:0000144!3.98e-13!121;CL:0000012!3.98e-13!121;CL:0002371!9.93e-12!118;CL:0000548!2.16e-10!115;CL:0000004!2.16e-10!115;CL:0000255!2.16e-10!115;CL:0000723!8.39e-10!91;CL:0000048!8.39e-10!91;CL:0000034!1.93e-09!97;CL:0002320!3.34e-09!46;CL:0000134!3.34e-09!46;CL:0000066!1.12e-07!25;CL:0000791!2.43e-07!9;CL:0000789!2.43e-07!9;CL:0002420!2.43e-07!9;CL:0002419!2.43e-07!9;CL:0000790!2.43e-07!9;CL:0000219!3.74e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,8.39e-10,91;CL:0000048,8.39e-10,91;CL:0000034,1.93e-09,97;CL:0002320,3.34e-09,46;CL:0000134,3.34e-09,46;CL:0000066,1.12e-07,25;CL:0000791,2.43e-07,9;CL:0000789,2.43e-07,9;CL:0002420,2.43e-07,9;CL:0002419,2.43e-07,9;CL:0000790,2.43e-07,9;CL:0000219,3.73e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.72e-13!48;UBERON:0002390!5.37e-12!45;UBERON:0003061!5.37e-12!45;UBERON:0002384!3.34e-09!46;UBERON:0002405!4.28e-09!70;UBERON:0000072!1.08e-08!27;UBERON:0004177!1.26e-07!29;UBERON:0006562!2.04e-07!24;UBERON:0001557!2.04e-07!24;UBERON:0001042!2.04e-07!24;UBERON:0008814!2.04e-07!24;UBERON:0009145!2.04e-07!24;UBERON:0002370!2.42e-07!23;UBERON:0000974!2.42e-07!23;UBERON:0004807!2.42e-07!23;UBERON:0005058!2.42e-07!23;UBERON:0003351!2.42e-07!23;UBERON:0009113!2.42e-07!23;UBERON:0003295!2.42e-07!23;UBERON:0009722!2.42e-07!23;UBERON:0005562!2.42e-07!23;UBERON:0007690!2.42e-07!23;UBERON:0000065!3.42e-07!41;UBERON:0003408!4.27e-07!24;UBERON:0001004!4.68e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.72e-13,48;UBERON:0002405,2.72e-13,48;UBERON:0002390,5.37e-12,45;UBERON:0003061,5.37e-12,45;UBERON:0002384,3.34e-09,46;UBERON:0000072,1.08e-08,27;UBERON:0000077,8.00e-08,35;UBERON:0004177,1.26e-07,29;UBERON:0005057,1.26e-07,29;UBERON:0006562,2.04e-07,24;UBERON:0001557,2.04e-07,24;UBERON:0001042,2.04e-07,24;UBERON:0008814,2.04e-07,24;UBERON:0009145,2.04e-07,24;UBERON:0002370,2.41e-07,23;UBERON:0000974,2.41e-07,23;UBERON:0004807,2.41e-07,23;UBERON:0005058,2.41e-07,23;UBERON:0003351,2.41e-07,23;UBERON:0009113,2.41e-07,23;UBERON:0003295,2.41e-07,23;UBERON:0009722,2.41e-07,23;UBERON:0005562,2.41e-07,23;UBERON:0007690,2.41e-07,23;UBERON:0000065,3.42e-07,41;UBERON:0003408,4.27e-07,24;UBERON:0001004,4.68e-07,42 | |||
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| |||
|short_description=p1@Btg1 | |||
}} |
Revision as of 18:04, 12 September 2013
Short description: | p1@Btg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Btg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 0bp_to_ENSMUST00000038377, NM_007569, uc007gww.2_5end |
EntrezGene: | Btg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 8.39e-10 | 91 |
multi fate stem cell | 8.39e-10 | 91 |
stem cell | 1.93e-09 | 97 |
connective tissue cell | 3.34e-09 | 46 |
mesenchymal cell | 3.34e-09 | 46 |
epithelial cell | 1.12e-07 | 25 |
mature alpha-beta T cell | 2.43e-07 | 9 |
alpha-beta T cell | 2.43e-07 | 9 |
immature T cell | 2.43e-07 | 9 |
mature T cell | 2.43e-07 | 9 |
immature alpha-beta T cell | 2.43e-07 | 9 |
motile cell | 3.73e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.72e-13 | 48 |
immune system | 2.72e-13 | 48 |
hematopoietic system | 5.37e-12 | 45 |
blood island | 5.37e-12 | 45 |
connective tissue | 3.34e-09 | 46 |
segment of respiratory tract | 1.08e-08 | 27 |
mixed endoderm/mesoderm-derived structure | 8.00e-08 | 35 |
hemopoietic organ | 1.26e-07 | 29 |
immune organ | 1.26e-07 | 29 |
pharynx | 2.04e-07 | 24 |
upper respiratory tract | 2.04e-07 | 24 |
chordate pharynx | 2.04e-07 | 24 |
pharyngeal arch system | 2.04e-07 | 24 |
pharyngeal region of foregut | 2.04e-07 | 24 |
thymus | 2.41e-07 | 23 |
neck | 2.41e-07 | 23 |
respiratory system epithelium | 2.41e-07 | 23 |
hemolymphoid system gland | 2.41e-07 | 23 |
pharyngeal epithelium | 2.41e-07 | 23 |
thymic region | 2.41e-07 | 23 |
pharyngeal gland | 2.41e-07 | 23 |
entire pharyngeal arch endoderm | 2.41e-07 | 23 |
thymus primordium | 2.41e-07 | 23 |
early pharyngeal endoderm | 2.41e-07 | 23 |
respiratory tract | 3.42e-07 | 41 |
gland of gut | 4.27e-07 | 24 |
respiratory system | 4.68e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.