FFCP PHASE1:Hg19::chr2:241808234..241808257,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=341|TSSclassifier=S|UniProt=|association_with_transcript=-5bp_to_ENST00000472436_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_AGXT_5end|id=chr2:241808234..241808257,+|ontology_enrichment_celltype=CL:0000181!1.22e-20!12;CL:0000417!1.22e-20!12;CL:0000668!1.22e-20!12;CL:0000414!1.22e-20!12;CL:0000412!1.22e-20!12;CL:0000182!1.22e-20!12;CL:0000223!1.65e-08!59|ontology_enrichment_celltype_v019=CL:0000182;3.15e-29;12!CL:0002541;2.55e-10;3|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-29,12;CL:0000223,8.19e-11,58;CL:0002541,2.88e-10,3|ontology_enrichment_development_v019=UBERON:0004161;1.75e-23;11!UBERON:0009497;8.41e-20;13!UBERON:0000358;1.65e-08;1!CL:0000223;2.55e-08;58!UBERON:0001041;2.74e-08;30!UBERON:0003104;4.72e-08;31|ontology_enrichment_disease=DOID:114!7.87e-09!2|ontology_enrichment_disease_v019=DOID:178;2.05e-08;1!DOID:326;2.05e-08;1!DOID:3978;2.05e-08;1!DOID:3394;2.05e-08;1!DOID:5844;2.05e-08;1|ontology_enrichment_disease_v019_2=DOID:178,1.98e-08,1;DOID:326,1.98e-08,1;DOID:3978,1.98e-08,1;DOID:3394,1.98e-08,1;DOID:5844,1.98e-08,1|ontology_enrichment_uberon=UBERON:0005057!2.42e-23!26;UBERON:0002107!8.94e-20!19;UBERON:0006925!8.94e-20!19;UBERON:0008836!8.94e-20!19;UBERON:0008835!8.66e-17!22;UBERON:0003894!8.66e-17!22;UBERON:0009854!5.75e-16!23;UBERON:0003929!6.80e-15!54;UBERON:0007499!1.61e-14!25;UBERON:0009497!1.61e-14!25;UBERON:0000015!1.61e-14!25;UBERON:0002423!1.61e-14!25;UBERON:0006235!1.61e-14!25;UBERON:0004161!1.61e-14!25;UBERON:0002368!6.59e-14!35;UBERON:0009856!7.00e-14!26;UBERON:0000949!4.73e-12!45;UBERON:0002365!2.63e-11!31;UBERON:0002330!2.63e-11!31;UBERON:0005172!4.23e-11!55;UBERON:0005173!4.23e-11!55;UBERON:0002530!5.68e-10!59;UBERON:0005911!9.20e-10!82;UBERON:0002417!1.07e-09!61;UBERON:0000916!1.07e-09!61;UBERON:0004921!3.64e-09!129;UBERON:0004185!3.64e-09!129;UBERON:0000077!4.09e-09!130;UBERON:0001041!1.06e-08!98;UBERON:0001007!1.29e-07!155;UBERON:0001555!1.29e-07!155;UBERON:0007026!1.29e-07!155;UBERON:0004119!2.39e-07!169;UBERON:0000925!2.39e-07!169;UBERON:0006595!2.39e-07!169|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-30;19!UBERON:0006925;4.52e-30;19!UBERON:0002423;1.59e-22;25!UBERON:0002365;2.23e-17;31!UBERON:0002330;2.23e-17;31!UBERON:0002368;3.08e-15;33!UBERON:0000949;6.09e-11;43!UBERON:0003124;2.55e-10;3!UBERON:0000920;2.55e-10;3!UBERON:0002106;3.24e-10;3!UBERON:0005172;4.01e-09;52!UBERON:0005173;4.01e-09;52!UBERON:0002417;6.22e-08;58!UBERON:0000916;6.22e-08;58!UBERON:0001007;1.17e-07;81!UBERON:0002530;6.22e-07;57!UBERON:0005631;8.20e-07;10!UBERON:0000158;8.20e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-30,19;UBERON:0006925,4.52e-30,19;UBERON:0008836,4.52e-30,19;UBERON:0008835,8.75e-26,22;UBERON:0003894,8.75e-26,22;UBERON:0009854,1.33e-24,23;UBERON:0007499,1.59e-22,25;UBERON:0009497,1.59e-22,25;UBERON:0000015,1.59e-22,25;UBERON:0002423,1.59e-22,25;UBERON:0006235,1.59e-22,25;UBERON:0004161,1.59e-22,25;UBERON:0009856,1.32e-21,26;UBERON:0002365,6.80e-18,31;UBERON:0002330,6.80e-18,31;UBERON:0002368,1.09e-15,35;UBERON:0003929,1.94e-14,54;UBERON:0005172,2.20e-14,54;UBERON:0005173,2.20e-14,54;UBERON:0002417,9.45e-13,60;UBERON:0000916,9.45e-13,60;UBERON:0000949,6.92e-12,45;UBERON:0002530,9.72e-11,59;UBERON:0000920,2.88e-10,3;UBERON:0002106,3.64e-10,3;UBERON:0004854,3.64e-10,3;UBERON:0009034,3.64e-10,3;UBERON:0002095,3.64e-10,3;UBERON:0004782,3.64e-10,3;UBERON:0003281,3.64e-10,3;UBERON:0009664,3.64e-10,3;UBERON:0002296,3.64e-10,3;UBERON:0005602,3.64e-10,3;UBERON:0001179,3.64e-10,3;UBERON:0006293,3.64e-10,3;UBERON:0001041,8.04e-10,87;UBERON:0004921,3.10e-09,118;UBERON:0005911,7.59e-09,82;UBERON:0000945,2.31e-08,8;UBERON:0010039,2.31e-08,8;UBERON:0001007,4.78e-07,145;UBERON:0001555,4.78e-07,145;UBERON:0007026,4.78e-07,145;UBERON:0005177,8.49e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,1663.02605686242,811.815280975719,768.026878685825,0,8.48620225947483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,467.187946810773,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000472436_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AGXT_5end | |||
|id=chr2:241808234..241808257,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.22e-20!12;CL:0000417!1.22e-20!12;CL:0000668!1.22e-20!12;CL:0000414!1.22e-20!12;CL:0000412!1.22e-20!12;CL:0000182!1.22e-20!12;CL:0000223!1.65e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.15e-29;12!CL:0002541;2.55e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-29,12;CL:0000223,8.19e-11,58;CL:0002541,2.88e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.75e-23;11!UBERON:0009497;8.41e-20;13!UBERON:0000358;1.65e-08;1!CL:0000223;2.55e-08;58!UBERON:0001041;2.74e-08;30!UBERON:0003104;4.72e-08;31 | |||
|ontology_enrichment_disease=DOID:114!7.87e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:178;2.05e-08;1!DOID:326;2.05e-08;1!DOID:3978;2.05e-08;1!DOID:3394;2.05e-08;1!DOID:5844;2.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.98e-08,1;DOID:326,1.98e-08,1;DOID:3978,1.98e-08,1;DOID:3394,1.98e-08,1;DOID:5844,1.98e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.42e-23!26;UBERON:0002107!8.94e-20!19;UBERON:0006925!8.94e-20!19;UBERON:0008836!8.94e-20!19;UBERON:0008835!8.66e-17!22;UBERON:0003894!8.66e-17!22;UBERON:0009854!5.75e-16!23;UBERON:0003929!6.80e-15!54;UBERON:0007499!1.61e-14!25;UBERON:0009497!1.61e-14!25;UBERON:0000015!1.61e-14!25;UBERON:0002423!1.61e-14!25;UBERON:0006235!1.61e-14!25;UBERON:0004161!1.61e-14!25;UBERON:0002368!6.59e-14!35;UBERON:0009856!7.00e-14!26;UBERON:0000949!4.73e-12!45;UBERON:0002365!2.63e-11!31;UBERON:0002330!2.63e-11!31;UBERON:0005172!4.23e-11!55;UBERON:0005173!4.23e-11!55;UBERON:0002530!5.68e-10!59;UBERON:0005911!9.20e-10!82;UBERON:0002417!1.07e-09!61;UBERON:0000916!1.07e-09!61;UBERON:0004921!3.64e-09!129;UBERON:0004185!3.64e-09!129;UBERON:0000077!4.09e-09!130;UBERON:0001041!1.06e-08!98;UBERON:0001007!1.29e-07!155;UBERON:0001555!1.29e-07!155;UBERON:0007026!1.29e-07!155;UBERON:0004119!2.39e-07!169;UBERON:0000925!2.39e-07!169;UBERON:0006595!2.39e-07!169 | |||
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|short_description=p1@AGXT | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p1@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AGXT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000472436_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-29 | 12 |
endodermal cell | 8.19e-11 | 58 |
chorionic membrane mesenchymal stem cell | 2.88e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.98e-08 | 1 |
ischemia | 1.98e-08 | 1 |
extrinsic cardiomyopathy | 1.98e-08 | 1 |
myocardial ischemia | 1.98e-08 | 1 |
myocardial infarction | 1.98e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.