FFCP PHASE1:Mm9::chr10:80857655..80857669,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1255|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:80857655..80857669,+|id=chr10:80857655..80857669,+|ontology_enrichment_celltype=CL:0002563!1.47e-09!9;CL:0002251!1.47e-09!9;CL:0000239!3.65e-07!6;CL:0000677!3.65e-07!6;CL:0000212!3.65e-07!6;CL:0000584!3.65e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.84e-18,9;CL:0002251,2.84e-18,9;CL:0000239,2.79e-13,6;CL:0000677,2.79e-13,6;CL:0000584,2.79e-13,6;CL:0000075,2.84e-11,7;CL:0002076,2.87e-10,15;CL:0000066,5.03e-10,25;CL:0000223,2.79e-07,20;CL:0000682,5.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.03e-17!43;UBERON:0005409!2.83e-17!59;UBERON:0000344!7.98e-16!15;UBERON:0001242!1.31e-13!13;UBERON:0000060!1.31e-13!13;UBERON:0001262!1.31e-13!13;UBERON:0004786!1.31e-13!13;UBERON:0004923!3.84e-11!24;UBERON:0003350!1.47e-09!9;UBERON:0004808!1.47e-09!9;UBERON:0001277!1.47e-09!9;UBERON:0000485!2.66e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-43,31;UBERON:0000344,2.03e-31,15;UBERON:0005409,1.93e-28,47;UBERON:0001242,9.24e-27,13;UBERON:0001262,9.24e-27,13;UBERON:0004786,9.24e-27,13;UBERON:0003350,2.84e-18,9;UBERON:0004808,2.84e-18,9;UBERON:0001277,2.84e-18,9;UBERON:0004923,3.17e-18,24;UBERON:0000485,1.24e-14,11;UBERON:0002108,1.19e-09,4;UBERON:0001007,1.24e-09,116;UBERON:0001555,1.24e-09,116;UBERON:0007026,1.24e-09,116;UBERON:0004119,2.36e-09,118;UBERON:0000925,2.36e-09,118;UBERON:0006595,2.36e-09,118;UBERON:0004921,6.18e-08,114;UBERON:0000331,1.05e-07,3;UBERON:0002116,1.05e-07,3;UBERON:0001204,1.05e-07,3;UBERON:0001168,1.05e-07,3|phase1_expression=0,7.67745896806594,5.0049916332849,11.7961042409664,10.5188103288733,2.01455126294268,3.27057696833736,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.18764069921526,0,0,20.3190376947626,13.535147582963,2.29692785646008,1.7230479846363,11.635446565038,15.5819203954227,7.05684363327806,3.32595765982957,0,0,0,1.73310971850765,2.1610503896604,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0.432982082022428,0,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,13.5471701023357,6.87571473325215,0,0,0.515469845288373,0.403367049246685,1.55664630691409,0.760902504450237,13.2868137232463,3.12928013975621,3.77002813200404,3.18330355265841,3.11942539390592,8.08937467788799,7.13255564586491,5.97423819763102,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,6.41257840585672,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0.523511883968059,1.16653475962614,0,26.4935681181569,0.149516546043979,0,0,0,0.168956125490778,0,0,0,8.21386010808421,10.0810502190253,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:80857655..80857669,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1255 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:80857655..80857669,+ | |||
|id=chr10:80857655..80857669,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.47e-09!9;CL:0002251!1.47e-09!9;CL:0000239!3.65e-07!6;CL:0000677!3.65e-07!6;CL:0000212!3.65e-07!6;CL:0000584!3.65e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.84e-18,9;CL:0002251,2.84e-18,9;CL:0000239,2.79e-13,6;CL:0000677,2.79e-13,6;CL:0000584,2.79e-13,6;CL:0000075,2.84e-11,7;CL:0002076,2.87e-10,15;CL:0000066,5.03e-10,25;CL:0000223,2.79e-07,20;CL:0000682,5.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.03e-17!43;UBERON:0005409!2.83e-17!59;UBERON:0000344!7.98e-16!15;UBERON:0001242!1.31e-13!13;UBERON:0000060!1.31e-13!13;UBERON:0001262!1.31e-13!13;UBERON:0004786!1.31e-13!13;UBERON:0004923!3.84e-11!24;UBERON:0003350!1.47e-09!9;UBERON:0004808!1.47e-09!9;UBERON:0001277!1.47e-09!9;UBERON:0000485!2.66e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.29e-43,31;UBERON:0000344,2.03e-31,15;UBERON:0005409,1.93e-28,47;UBERON:0001242,9.24e-27,13;UBERON:0001262,9.24e-27,13;UBERON:0004786,9.24e-27,13;UBERON:0003350,2.84e-18,9;UBERON:0004808,2.84e-18,9;UBERON:0001277,2.84e-18,9;UBERON:0004923,3.17e-18,24;UBERON:0000485,1.24e-14,11;UBERON:0002108,1.19e-09,4;UBERON:0001007,1.24e-09,116;UBERON:0001555,1.24e-09,116;UBERON:0007026,1.24e-09,116;UBERON:0004119,2.36e-09,118;UBERON:0000925,2.36e-09,118;UBERON:0006595,2.36e-09,118;UBERON:0004921,6.18e-08,114;UBERON:0000331,1.05e-07,3;UBERON:0002116,1.05e-07,3;UBERON:0001204,1.05e-07,3;UBERON:0001168,1.05e-07,3 | |||
|phase1_expression=0,7.67745896806594,5.0049916332849,11.7961042409664,10.5188103288733,2.01455126294268,3.27057696833736,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,5.18764069921526,0,0,20.3190376947626,13.535147582963,2.29692785646008,1.7230479846363,11.635446565038,15.5819203954227,7.05684363327806,3.32595765982957,0,0,0,1.73310971850765,2.1610503896604,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0.432982082022428,0,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,13.5471701023357,6.87571473325215,0,0,0.515469845288373,0.403367049246685,1.55664630691409,0.760902504450237,13.2868137232463,3.12928013975621,3.77002813200404,3.18330355265841,3.11942539390592,8.08937467788799,7.13255564586491,5.97423819763102,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,6.41257840585672,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.218362563746178,0.404593039154462,0.165306911450672,0.523511883968059,1.16653475962614,0,26.4935681181569,0.149516546043979,0,0,0,0.168956125490778,0,0,0,8.21386010808421,10.0810502190253,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:80857655..80857669,+ | |||
}} |
Revision as of 17:43, 12 September 2013
Short description: | p@chr10:80857655..80857669, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80857655..80857669, + |
Coexpression cluster: | MCL_coexpression_mm9:1255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.84e-18 | 9 |
epithelial cell of alimentary canal | 2.84e-18 | 9 |
brush border epithelial cell | 2.79e-13 | 6 |
gut absorptive cell | 2.79e-13 | 6 |
enterocyte | 2.79e-13 | 6 |
columnar/cuboidal epithelial cell | 2.84e-11 | 7 |
endo-epithelial cell | 2.87e-10 | 15 |
epithelial cell | 5.03e-10 | 25 |
endodermal cell | 2.79e-07 | 20 |
M cell of gut | 5.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.29e-43 | 31 |
mucosa | 2.03e-31 | 15 |
gastrointestinal system | 1.93e-28 | 47 |
intestinal mucosa | 9.24e-27 | 13 |
wall of intestine | 9.24e-27 | 13 |
gastrointestinal system mucosa | 9.24e-27 | 13 |
epithelium of mucosa | 2.84e-18 | 9 |
gastrointestinal system epithelium | 2.84e-18 | 9 |
intestinal epithelium | 2.84e-18 | 9 |
organ component layer | 3.17e-18 | 24 |
simple columnar epithelium | 1.24e-14 | 11 |
small intestine | 1.19e-09 | 4 |
digestive system | 1.24e-09 | 116 |
digestive tract | 1.24e-09 | 116 |
primitive gut | 1.24e-09 | 116 |
endoderm-derived structure | 2.36e-09 | 118 |
endoderm | 2.36e-09 | 118 |
presumptive endoderm | 2.36e-09 | 118 |
subdivision of digestive tract | 6.18e-08 | 114 |
ileal mucosa | 1.05e-07 | 3 |
ileum | 1.05e-07 | 3 |
mucosa of small intestine | 1.05e-07 | 3 |
wall of small intestine | 1.05e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.