FFCP PHASE1:Hg19::chr2:224849552..224849572,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5270|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8951|TSSclassifier=N|UniProt=|association_with_transcript=212bp_to_ENST00000478966_5end|coexpression_cluster_id=C354|description=CAGE_peak_11_at_SERPINE2_5end|id=chr2:224849552..224849572,-|ontology_enrichment_celltype=CL:0000055!1.75e-19!180;CL:0000057!1.71e-15!75;CL:0002620!2.03e-11!23;CL:0002334!2.44e-07!12|ontology_enrichment_celltype_v019=CL:0000153;2.02e-14;9!CL:0000447;2.02e-14;9!CL:0000499;8.61e-12;28!CL:0002620;1.71e-11;23!CL:0000138;1.86e-11;6!CL:1000306;3.71e-11;4!CL:0002547;3.71e-11;4!CL:0002579;1.04e-09;3!CL:0000135;1.13e-09;3!CL:0000388;1.13e-09;3!CL:0002541;2.07e-09;3!CL:0000327;3.42e-08;15!CL:0002334;5.36e-08;12|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-15,76;CL:0000153,1.28e-14,9;CL:0000447,1.28e-14,9;CL:0000499,7.77e-12,28;CL:0000058,1.24e-11,6;CL:0000138,1.24e-11,6;CL:0002620,1.58e-11,23;CL:1000306,2.25e-11,4;CL:0002547,2.25e-11,4;CL:0002579,1.05e-09,3;CL:0000135,1.17e-09,3;CL:0000388,1.17e-09,3;CL:0002541,2.36e-09,3;CL:0000048,4.51e-09,427;CL:0000723,9.44e-09,433;CL:0000134,2.26e-08,354;CL:0000034,2.44e-08,441;CL:0000327,2.64e-08,15;CL:0000219,3.51e-08,386;CL:0002334,4.89e-08,12;CL:0002320,5.63e-08,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.33e-13;5!DOID:450;2.33e-13;5!DOID:66;2.33e-13;5!DOID:423;2.33e-13;5!DOID:0080000;2.33e-13;5!DOID:11722;2.33e-13;5!DOID:0060084;1.13e-09;3!DOID:127;1.13e-09;3!DOID:0060072;2.51e-07;4|ontology_enrichment_disease_v019_2=DOID:17,1.62e-13,5;DOID:450,1.62e-13,5;DOID:66,1.62e-13,5;DOID:423,1.62e-13,5;DOID:0080000,1.62e-13,5;DOID:11722,1.62e-13,5;DOID:0060084,1.17e-09,3;DOID:127,1.17e-09,3;DOID:0060072,2.57e-07,4|ontology_enrichment_uberon=UBERON:0002097!4.82e-11!40;UBERON:0002199!1.94e-10!45;UBERON:0002416!1.94e-10!45;UBERON:0003102!1.19e-08!95|ontology_enrichment_uberon_v019=UBERON:0004457;8.38e-15;9!UBERON:0000042;8.38e-15;9!UBERON:0003688;7.19e-12;6!UBERON:0002358;7.19e-12;6!UBERON:0003684;7.19e-12;6!UBERON:0001178;7.19e-12;6!UBERON:0004797;3.71e-11;4!UBERON:0000415;3.71e-11;4!UBERON:0007240;3.71e-11;4!UBERON:0005742;3.71e-11;4!UBERON:0005734;3.71e-11;4!UBERON:0004664;3.71e-11;4!UBERON:0004663;3.71e-11;4!UBERON:0007846;1.13e-09;3!UBERON:0000043;1.13e-09;3!UBERON:0007845;1.13e-09;3!UBERON:0003124;2.07e-09;3!UBERON:0000920;2.07e-09;3!UBERON:0002097;6.97e-09;41!UBERON:0005406;7.55e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.29e-12,6;UBERON:0002358,9.29e-12,6;UBERON:0003684,9.29e-12,6;UBERON:0001178,9.29e-12,6;UBERON:0000415,2.25e-11,4;UBERON:0007240,2.25e-11,4;UBERON:0005742,2.25e-11,4;UBERON:0005734,2.25e-11,4;UBERON:0004664,2.25e-11,4;UBERON:0004663,2.25e-11,4;UBERON:0004923,2.63e-11,66;UBERON:0002097,7.78e-11,41;UBERON:0004457,9.37e-11,12;UBERON:0000042,9.37e-11,12;UBERON:0007846,1.17e-09,3;UBERON:0000043,1.17e-09,3;UBERON:0007845,1.17e-09,3;UBERON:0000920,2.36e-09,3;UBERON:0002199,2.82e-09,46;UBERON:0002416,2.82e-09,46;UBERON:0002384,4.94e-08,371;UBERON:0005406,6.48e-07,2|phase1_expression=1.09007027562334,0.642301571672949,1.12763523276777,3.00219895059391,0.893922188854576,9.59572376510406,0,0.631719873426831,0,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,1.50401373190767,1.59331170856906,7.15757352345989,6.8128881842369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,5.4666914686485,2.65924074495618,1.72131935057184,16.92336062418,1.41867352879343,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0,1.34503812496621,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,1.18800285728205,0.741800787835671,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.45071417671979,0.113432183160021,2.69084453533293,1.70845911054854,1.48352330811693,4.20127534518163,2.06105058476878,1.54584324027377,0.930584281657949,0.506328996723799,1.65642908774038,0.757301322732344,1.10459878370759,0.80823028409406,8.16522062788213,1.0075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.72995471815166,1.56449532329816,2.57296375277154,0,0,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.548751427043128,0,0.402115889646523,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,1.14596527667483,0,0,1.54241239054985,1.8020583470635,0,0,0,0,0.775630294546667,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8951 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=212bp_to_ENST00000478966_5end | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_11_at_SERPINE2_5end | |||
|id=chr2:224849552..224849572,- | |||
|ontology_enrichment_celltype=CL:0000055!1.75e-19!180;CL:0000057!1.71e-15!75;CL:0002620!2.03e-11!23;CL:0002334!2.44e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.02e-14;9!CL:0000447;2.02e-14;9!CL:0000499;8.61e-12;28!CL:0002620;1.71e-11;23!CL:0000138;1.86e-11;6!CL:1000306;3.71e-11;4!CL:0002547;3.71e-11;4!CL:0002579;1.04e-09;3!CL:0000135;1.13e-09;3!CL:0000388;1.13e-09;3!CL:0002541;2.07e-09;3!CL:0000327;3.42e-08;15!CL:0002334;5.36e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-15,76;CL:0000153,1.28e-14,9;CL:0000447,1.28e-14,9;CL:0000499,7.77e-12,28;CL:0000058,1.24e-11,6;CL:0000138,1.24e-11,6;CL:0002620,1.58e-11,23;CL:1000306,2.25e-11,4;CL:0002547,2.25e-11,4;CL:0002579,1.05e-09,3;CL:0000135,1.17e-09,3;CL:0000388,1.17e-09,3;CL:0002541,2.36e-09,3;CL:0000048,4.51e-09,427;CL:0000723,9.44e-09,433;CL:0000134,2.26e-08,354;CL:0000034,2.44e-08,441;CL:0000327,2.64e-08,15;CL:0000219,3.51e-08,386;CL:0002334,4.89e-08,12;CL:0002320,5.63e-08,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.33e-13;5!DOID:450;2.33e-13;5!DOID:66;2.33e-13;5!DOID:423;2.33e-13;5!DOID:0080000;2.33e-13;5!DOID:11722;2.33e-13;5!DOID:0060084;1.13e-09;3!DOID:127;1.13e-09;3!DOID:0060072;2.51e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.62e-13,5;DOID:450,1.62e-13,5;DOID:66,1.62e-13,5;DOID:423,1.62e-13,5;DOID:0080000,1.62e-13,5;DOID:11722,1.62e-13,5;DOID:0060084,1.17e-09,3;DOID:127,1.17e-09,3;DOID:0060072,2.57e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.82e-11!40;UBERON:0002199!1.94e-10!45;UBERON:0002416!1.94e-10!45;UBERON:0003102!1.19e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.38e-15;9!UBERON:0000042;8.38e-15;9!UBERON:0003688;7.19e-12;6!UBERON:0002358;7.19e-12;6!UBERON:0003684;7.19e-12;6!UBERON:0001178;7.19e-12;6!UBERON:0004797;3.71e-11;4!UBERON:0000415;3.71e-11;4!UBERON:0007240;3.71e-11;4!UBERON:0005742;3.71e-11;4!UBERON:0005734;3.71e-11;4!UBERON:0004664;3.71e-11;4!UBERON:0004663;3.71e-11;4!UBERON:0007846;1.13e-09;3!UBERON:0000043;1.13e-09;3!UBERON:0007845;1.13e-09;3!UBERON:0003124;2.07e-09;3!UBERON:0000920;2.07e-09;3!UBERON:0002097;6.97e-09;41!UBERON:0005406;7.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.29e-12,6;UBERON:0002358,9.29e-12,6;UBERON:0003684,9.29e-12,6;UBERON:0001178,9.29e-12,6;UBERON:0000415,2.25e-11,4;UBERON:0007240,2.25e-11,4;UBERON:0005742,2.25e-11,4;UBERON:0005734,2.25e-11,4;UBERON:0004664,2.25e-11,4;UBERON:0004663,2.25e-11,4;UBERON:0004923,2.63e-11,66;UBERON:0002097,7.78e-11,41;UBERON:0004457,9.37e-11,12;UBERON:0000042,9.37e-11,12;UBERON:0007846,1.17e-09,3;UBERON:0000043,1.17e-09,3;UBERON:0007845,1.17e-09,3;UBERON:0000920,2.36e-09,3;UBERON:0002199,2.82e-09,46;UBERON:0002416,2.82e-09,46;UBERON:0002384,4.94e-08,371;UBERON:0005406,6.48e-07,2 | |||
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| |||
|short_description=p11@SERPINE2 | |||
}} |
Revision as of 17:07, 12 September 2013
Short description: | p11@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 212bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.05e-15 | 76 |
GAG secreting cell | 1.28e-14 | 9 |
carbohydrate secreting cell | 1.28e-14 | 9 |
stromal cell | 7.77e-12 | 28 |
chondroblast | 1.24e-11 | 6 |
chondrocyte | 1.24e-11 | 6 |
skin fibroblast | 1.58e-11 | 23 |
fibroblast of tunica adventitia of artery | 2.25e-11 | 4 |
fibroblast of the aortic adventitia | 2.25e-11 | 4 |
omentum preadipocyte | 1.05e-09 | 3 |
fibrocyte | 1.17e-09 | 3 |
tendon cell | 1.17e-09 | 3 |
chorionic membrane mesenchymal stem cell | 2.36e-09 | 3 |
multi fate stem cell | 4.51e-09 | 427 |
somatic stem cell | 9.44e-09 | 433 |
mesenchymal cell | 2.26e-08 | 354 |
stem cell | 2.44e-08 | 441 |
extracellular matrix secreting cell | 2.64e-08 | 15 |
motile cell | 3.51e-08 | 386 |
preadipocyte | 4.89e-08 | 12 |
connective tissue cell | 5.63e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.29e-12 | 6 |
peritoneum | 9.29e-12 | 6 |
abdominal cavity | 9.29e-12 | 6 |
visceral peritoneum | 9.29e-12 | 6 |
artery wall | 2.25e-11 | 4 |
tunica adventitia of artery | 2.25e-11 | 4 |
adventitia | 2.25e-11 | 4 |
tunica adventitia of blood vessel | 2.25e-11 | 4 |
aorta tunica adventitia | 2.25e-11 | 4 |
aorta wall | 2.25e-11 | 4 |
organ component layer | 2.63e-11 | 66 |
skin of body | 7.78e-11 | 41 |
cavity lining | 9.37e-11 | 12 |
serous membrane | 9.37e-11 | 12 |
dense regular connective tissue | 1.17e-09 | 3 |
tendon | 1.17e-09 | 3 |
regular connective tissue | 1.17e-09 | 3 |
egg chorion | 2.36e-09 | 3 |
integument | 2.82e-09 | 46 |
integumental system | 2.82e-09 | 46 |
connective tissue | 4.94e-08 | 371 |
perirenal fat | 6.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.62e-13 | 5 |
myotonic disease | 1.62e-13 | 5 |
muscle tissue disease | 1.62e-13 | 5 |
myopathy | 1.62e-13 | 5 |
muscular disease | 1.62e-13 | 5 |
myotonic dystrophy | 1.62e-13 | 5 |
cell type benign neoplasm | 1.17e-09 | 3 |
leiomyoma | 1.17e-09 | 3 |
benign neoplasm | 2.57e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.