FFCP PHASE1:Mm9::chr10:22364927..22364943,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=353169|HGNC=|UniProt=Q8BFW9,B2RRB2|association_with_transcript=110bp_to_ENSMUST00000042261,NM_178934,uc007epo.2_5end|description=CAGE_peak_2_at_Slc2a12_5end|id=chr10:22364927..22364943,+|ontology_enrichment_celltype=CL:0000117!2.37e-08!23;CL:0000337!2.37e-08!23;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44;CL:0002319!5.13e-07!43|ontology_enrichment_celltype_v019_2=CL:0002319,3.13e-11,43;CL:0000221,7.37e-11,44;CL:0000133,7.37e-11,44;CL:0002453,9.01e-11,8;CL:0000117,2.02e-09,23;CL:0000337,2.02e-09,23;CL:0000333,2.34e-08,10;CL:0000095,2.34e-08,10;CL:0000243,2.34e-08,10;CL:0000123,2.34e-08,10;CL:0000125,2.34e-08,10;CL:0000030,2.34e-08,10;CL:0000339,2.34e-08,10;CL:0000128,7.84e-08,6;CL:0000126,7.84e-08,6;CL:0000127,7.84e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.55e-14!102;UBERON:0000924!4.55e-14!102;UBERON:0006601!4.55e-14!102;UBERON:0000033!5.55e-14!63;UBERON:0001017!4.80e-13!73;UBERON:0005743!4.80e-13!73;UBERON:0000073!1.44e-12!75;UBERON:0001016!1.44e-12!75;UBERON:0001049!3.31e-12!52;UBERON:0005068!3.31e-12!52;UBERON:0006241!3.31e-12!52;UBERON:0007135!3.31e-12!52;UBERON:0000955!3.90e-11!50;UBERON:0006238!3.90e-11!50;UBERON:0002616!8.10e-11!49;UBERON:0002346!6.05e-10!71;UBERON:0003075!6.05e-10!71;UBERON:0007284!6.05e-10!71;UBERON:0003056!3.74e-08!49;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12;UBERON:0003080!7.28e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-17,54;UBERON:0001017,7.00e-17,73;UBERON:0001016,3.32e-16,75;UBERON:0004121,2.99e-15,95;UBERON:0000924,2.99e-15,95;UBERON:0006601,2.99e-15,95;UBERON:0001049,6.85e-14,52;UBERON:0005068,6.85e-14,52;UBERON:0006241,6.85e-14,52;UBERON:0007135,6.85e-14,52;UBERON:0002346,2.74e-12,64;UBERON:0003075,2.74e-12,64;UBERON:0007284,2.74e-12,64;UBERON:0010371,4.42e-11,73;UBERON:0003076,2.30e-10,12;UBERON:0003057,2.30e-10,12;UBERON:0002616,1.49e-09,46;UBERON:0000955,3.03e-09,47;UBERON:0006238,3.03e-09,47;UBERON:0001948,1.65e-08,5;UBERON:0002315,1.65e-08,5;UBERON:0005795,2.26e-08,4;UBERON:0000995,2.26e-08,4;UBERON:0000007,1.62e-07,8;UBERON:0003296,1.62e-07,8;UBERON:0010133,1.62e-07,8;UBERON:0002020,3.71e-07,34;UBERON:0002240,5.17e-07,6;UBERON:0005174,5.17e-07,6;UBERON:0001137,5.17e-07,6;UBERON:0002780,5.81e-07,39;UBERON:0001890,5.81e-07,39;UBERON:0006240,5.81e-07,39|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,4.69434806608824,0.218025156380447,3.51497892375155,6.02732687130279,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,0.809265843438391,0.528990979272033,1.26766280701236,3.72728985276045,1.77858959222228,0,0,0,2.09720077362883,2.30530983192933,0.311068836925433,0.540023753326763,0.420649922702764,1.42825492201902,3.75476519617743,0,0.191690942036473,0,1.10115880999389,1.65993539510744,1.53606533256243,0.527545150920775,0.274462930807229,1.04182674111352,2.23346399201105,2.25105044012672,3.81995619442025,2.06240009831567,2.56269025438385,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,2.92780797011547,2.51336048176146,0,0,0,0,0.898743836428936,1.37250180845588,0,0,0.255715457330331,0.83115217823824,0.973447578406546,0,0.248813941220186,0.505445516867349,0.210441855886474,0.390361328888111,0,0.360124259610698,0.150704817835715,0.612328492361951,1.2811372028485,0.468508622798644,1.81092359517311,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,7.14985825118033,4.73361216944708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0.814605311381257,0.193952487167626,0.280543279561274,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.17211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0.162886959353576,5.44401405809367,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52085531643834,1.55230420539305,1.71469628025274,3.54680467284547,1.96205699362278,1.81003922662333,0.608929898229199,13.6109590676952,1.48282449604674,0.882113592219848,3.95727007059552,0,0.301564624640779,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.539457385539283,0.330613822901344,0.26175594198403,0.388844919875379,1.24267862617385,0.56369293868419,0.299033092087958,0,0,0,0,0,0,0.838874755405687,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,1.10992976687032,0.0897138566094757,0,3.09103350451505,8.63339387075437,8.42497471629419,0.857473516316263,1.50471631210609,0,0,0.572895513439397,0,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0,0,0.37456602987953,0.320125762024346,0.631790158511746,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.735994600671987,0,0.70990322463735,0.953744759789284,0.872078499793971,0.376437521661322,0.761531471025089,0.73171189149109,0.526139422875686,0.135804113845862,1.12228454331548,0.949080144993393,0.394017929502254,0.409231043169689,0.309873682371932,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,1.53030665655075,0.661774257358546,0.927471342481686|short_description=p2@Slc2a12}} | ||
|EntrezGene=353169 | |||
|HGNC= | |||
|UniProt=Q8BFW9,B2RRB2 | |||
|association_with_transcript=110bp_to_ENSMUST00000042261,NM_178934,uc007epo.2_5end | |||
|description=CAGE_peak_2_at_Slc2a12_5end | |||
|id=chr10:22364927..22364943,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.37e-08!23;CL:0000337!2.37e-08!23;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44;CL:0002319!5.13e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.13e-11,43;CL:0000221,7.37e-11,44;CL:0000133,7.37e-11,44;CL:0002453,9.01e-11,8;CL:0000117,2.02e-09,23;CL:0000337,2.02e-09,23;CL:0000333,2.34e-08,10;CL:0000095,2.34e-08,10;CL:0000243,2.34e-08,10;CL:0000123,2.34e-08,10;CL:0000125,2.34e-08,10;CL:0000030,2.34e-08,10;CL:0000339,2.34e-08,10;CL:0000128,7.84e-08,6;CL:0000126,7.84e-08,6;CL:0000127,7.84e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.55e-14!102;UBERON:0000924!4.55e-14!102;UBERON:0006601!4.55e-14!102;UBERON:0000033!5.55e-14!63;UBERON:0001017!4.80e-13!73;UBERON:0005743!4.80e-13!73;UBERON:0000073!1.44e-12!75;UBERON:0001016!1.44e-12!75;UBERON:0001049!3.31e-12!52;UBERON:0005068!3.31e-12!52;UBERON:0006241!3.31e-12!52;UBERON:0007135!3.31e-12!52;UBERON:0000955!3.90e-11!50;UBERON:0006238!3.90e-11!50;UBERON:0002616!8.10e-11!49;UBERON:0002346!6.05e-10!71;UBERON:0003075!6.05e-10!71;UBERON:0007284!6.05e-10!71;UBERON:0003056!3.74e-08!49;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12;UBERON:0003080!7.28e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-17,54;UBERON:0001017,7.00e-17,73;UBERON:0001016,3.32e-16,75;UBERON:0004121,2.99e-15,95;UBERON:0000924,2.99e-15,95;UBERON:0006601,2.99e-15,95;UBERON:0001049,6.85e-14,52;UBERON:0005068,6.85e-14,52;UBERON:0006241,6.85e-14,52;UBERON:0007135,6.85e-14,52;UBERON:0002346,2.74e-12,64;UBERON:0003075,2.74e-12,64;UBERON:0007284,2.74e-12,64;UBERON:0010371,4.42e-11,73;UBERON:0003076,2.30e-10,12;UBERON:0003057,2.30e-10,12;UBERON:0002616,1.49e-09,46;UBERON:0000955,3.03e-09,47;UBERON:0006238,3.03e-09,47;UBERON:0001948,1.65e-08,5;UBERON:0002315,1.65e-08,5;UBERON:0005795,2.26e-08,4;UBERON:0000995,2.26e-08,4;UBERON:0000007,1.62e-07,8;UBERON:0003296,1.62e-07,8;UBERON:0010133,1.62e-07,8;UBERON:0002020,3.71e-07,34;UBERON:0002240,5.17e-07,6;UBERON:0005174,5.17e-07,6;UBERON:0001137,5.17e-07,6;UBERON:0002780,5.81e-07,39;UBERON:0001890,5.81e-07,39;UBERON:0006240,5.81e-07,39 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,4.69434806608824,0.218025156380447,3.51497892375155,6.02732687130279,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,0.809265843438391,0.528990979272033,1.26766280701236,3.72728985276045,1.77858959222228,0,0,0,2.09720077362883,2.30530983192933,0.311068836925433,0.540023753326763,0.420649922702764,1.42825492201902,3.75476519617743,0,0.191690942036473,0,1.10115880999389,1.65993539510744,1.53606533256243,0.527545150920775,0.274462930807229,1.04182674111352,2.23346399201105,2.25105044012672,3.81995619442025,2.06240009831567,2.56269025438385,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,2.92780797011547,2.51336048176146,0,0,0,0,0.898743836428936,1.37250180845588,0,0,0.255715457330331,0.83115217823824,0.973447578406546,0,0.248813941220186,0.505445516867349,0.210441855886474,0.390361328888111,0,0.360124259610698,0.150704817835715,0.612328492361951,1.2811372028485,0.468508622798644,1.81092359517311,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,7.14985825118033,4.73361216944708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0.814605311381257,0.193952487167626,0.280543279561274,0.505892296994058,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.17211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0.162886959353576,5.44401405809367,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52085531643834,1.55230420539305,1.71469628025274,3.54680467284547,1.96205699362278,1.81003922662333,0.608929898229199,13.6109590676952,1.48282449604674,0.882113592219848,3.95727007059552,0,0.301564624640779,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.539457385539283,0.330613822901344,0.26175594198403,0.388844919875379,1.24267862617385,0.56369293868419,0.299033092087958,0,0,0,0,0,0,0.838874755405687,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,1.10992976687032,0.0897138566094757,0,3.09103350451505,8.63339387075437,8.42497471629419,0.857473516316263,1.50471631210609,0,0,0.572895513439397,0,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,1.01078884705519,0,0,0.37456602987953,0.320125762024346,0.631790158511746,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.735994600671987,0,0.70990322463735,0.953744759789284,0.872078499793971,0.376437521661322,0.761531471025089,0.73171189149109,0.526139422875686,0.135804113845862,1.12228454331548,0.949080144993393,0.394017929502254,0.409231043169689,0.309873682371932,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,1.53030665655075,0.661774257358546,0.927471342481686 | |||
|short_description=p2@Slc2a12 | |||
}} |
Revision as of 16:27, 12 September 2013
Short description: | p2@Slc2a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc2a12_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_ENSMUST00000042261, NM_178934, uc007epo.2_5end |
EntrezGene: | Slc2a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.13e-11 | 43 |
ectodermal cell | 7.37e-11 | 44 |
neurectodermal cell | 7.37e-11 | 44 |
oligodendrocyte precursor cell | 9.01e-11 | 8 |
CNS neuron (sensu Vertebrata) | 2.02e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-09 | 23 |
migratory neural crest cell | 2.34e-08 | 10 |
neuron associated cell | 2.34e-08 | 10 |
glial cell (sensu Vertebrata) | 2.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.34e-08 | 10 |
glial cell | 2.34e-08 | 10 |
glioblast | 2.34e-08 | 10 |
glioblast (sensu Vertebrata) | 2.34e-08 | 10 |
oligodendrocyte | 7.84e-08 | 6 |
macroglial cell | 7.84e-08 | 6 |
astrocyte | 7.84e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.17e-17 | 54 |
central nervous system | 7.00e-17 | 73 |
nervous system | 3.32e-16 | 75 |
ectoderm-derived structure | 2.99e-15 | 95 |
ectoderm | 2.99e-15 | 95 |
presumptive ectoderm | 2.99e-15 | 95 |
neural tube | 6.85e-14 | 52 |
neural rod | 6.85e-14 | 52 |
future spinal cord | 6.85e-14 | 52 |
neural keel | 6.85e-14 | 52 |
neurectoderm | 2.74e-12 | 64 |
neural plate | 2.74e-12 | 64 |
presumptive neural plate | 2.74e-12 | 64 |
ecto-epithelium | 4.42e-11 | 73 |
posterior neural tube | 2.30e-10 | 12 |
chordal neural plate | 2.30e-10 | 12 |
regional part of brain | 1.49e-09 | 46 |
brain | 3.03e-09 | 47 |
future brain | 3.03e-09 | 47 |
regional part of spinal cord | 1.65e-08 | 5 |
gray matter of spinal cord | 1.65e-08 | 5 |
embryonic uterus | 2.26e-08 | 4 |
uterus | 2.26e-08 | 4 |
pituitary gland | 1.62e-07 | 8 |
gland of diencephalon | 1.62e-07 | 8 |
neuroendocrine gland | 1.62e-07 | 8 |
gray matter | 3.71e-07 | 34 |
spinal cord | 5.17e-07 | 6 |
dorsal region element | 5.17e-07 | 6 |
dorsum | 5.17e-07 | 6 |
regional part of forebrain | 5.81e-07 | 39 |
forebrain | 5.81e-07 | 39 |
future forebrain | 5.81e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.