FFCP PHASE1:Hg19::chr2:21233008..21233017,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=603|TSSclassifier=N|UniProt=P04114|association_with_transcript=343bp_to_M19734_5end|coexpression_cluster_id=C5|description=CAGE_peak_63_at_APOB_5end|id=chr2:21233008..21233017,-|ontology_enrichment_celltype=CL:0000181!1.17e-42!12;CL:0000417!1.17e-42!12;CL:0000668!1.17e-42!12;CL:0000414!1.17e-42!12;CL:0000412!1.17e-42!12;CL:0000182!1.17e-42!12;CL:0000223!2.23e-11!59;CL:0002253!3.08e-08!2|ontology_enrichment_celltype_v019=CL:0000182;1.18e-51;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.18e-51,12;CL:0000223,5.62e-11,58|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.50e-20;31!CL:0000223;1.21e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.89e-47!19;UBERON:0006925!1.89e-47!19;UBERON:0008836!1.89e-47!19;UBERON:0008835!6.45e-41!22;UBERON:0003894!6.45e-41!22;UBERON:0009854!4.07e-39!23;UBERON:0007499!6.00e-36!25;UBERON:0009497!6.00e-36!25;UBERON:0000015!6.00e-36!25;UBERON:0002423!6.00e-36!25;UBERON:0006235!6.00e-36!25;UBERON:0004161!6.00e-36!25;UBERON:0005057!1.51e-34!26;UBERON:0009856!1.51e-34!26;UBERON:0002365!6.88e-29!31;UBERON:0002330!6.88e-29!31;UBERON:0002368!1.60e-25!35;UBERON:0003929!1.47e-20!54;UBERON:0000949!1.02e-19!45;UBERON:0005172!5.13e-16!55;UBERON:0005173!5.13e-16!55;UBERON:0002530!6.93e-15!59;UBERON:0004921!1.56e-14!129;UBERON:0004185!1.56e-14!129;UBERON:0002417!2.25e-14!61;UBERON:0000916!2.25e-14!61;UBERON:0005911!2.98e-13!82;UBERON:0001007!6.74e-12!155;UBERON:0001555!6.74e-12!155;UBERON:0007026!6.74e-12!155;UBERON:0004119!8.25e-11!169;UBERON:0000925!8.25e-11!169;UBERON:0006595!8.25e-11!169;UBERON:0001041!1.13e-08!98;UBERON:0000160!2.78e-08!27;UBERON:0000077!5.14e-08!130;UBERON:0005177!7.07e-08!107;UBERON:0000490!1.71e-07!138;UBERON:0009569!2.04e-07!113;UBERON:0002405!3.33e-07!115;UBERON:0001155!4.28e-07!9;UBERON:0003914!4.55e-07!118|ontology_enrichment_uberon_v019=UBERON:0002107;2.15e-63;19!UBERON:0006925;2.15e-63;19!UBERON:0002423;2.87e-48;25!UBERON:0002365;3.95e-37;31!UBERON:0002330;3.95e-37;31!UBERON:0002368;4.40e-33;33!UBERON:0000949;5.39e-24;43!UBERON:0005172;2.45e-14;52!UBERON:0005173;2.45e-14;52!UBERON:0002530;1.78e-13;57!UBERON:0002417;9.29e-12;58!UBERON:0000916;9.29e-12;58!UBERON:0001007;5.72e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.79e-63,19;UBERON:0006925,1.79e-63,19;UBERON:0008836,1.79e-63,19;UBERON:0008835,7.16e-55,22;UBERON:0003894,7.16e-55,22;UBERON:0009854,1.68e-52,23;UBERON:0007499,2.49e-48,25;UBERON:0009497,2.49e-48,25;UBERON:0000015,2.49e-48,25;UBERON:0002423,2.49e-48,25;UBERON:0006235,2.49e-48,25;UBERON:0004161,2.49e-48,25;UBERON:0009856,1.75e-46,26;UBERON:0002365,4.89e-39,31;UBERON:0002330,4.89e-39,31;UBERON:0002368,1.31e-34,35;UBERON:0000949,5.70e-27,45;UBERON:0003929,1.66e-22,54;UBERON:0005172,1.66e-22,54;UBERON:0005173,1.66e-22,54;UBERON:0002530,1.30e-20,59;UBERON:0002417,2.85e-20,60;UBERON:0000916,2.85e-20,60;UBERON:0005911,7.37e-15,82;UBERON:0001041,5.23e-14,87;UBERON:0004921,2.56e-13,118;UBERON:0005177,4.53e-12,101;UBERON:0009569,6.96e-11,112;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0003914,2.04e-10,117;UBERON:0005256,5.46e-10,122;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000490,3.20e-08,148;UBERON:0001048,1.35e-07,160;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160;UBERON:0011216,6.23e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=N | |||
|UniProt=P04114 | |||
|association_with_transcript=343bp_to_M19734_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_63_at_APOB_5end | |||
|id=chr2:21233008..21233017,- | |||
|ontology_enrichment_celltype=CL:0000181!1.17e-42!12;CL:0000417!1.17e-42!12;CL:0000668!1.17e-42!12;CL:0000414!1.17e-42!12;CL:0000412!1.17e-42!12;CL:0000182!1.17e-42!12;CL:0000223!2.23e-11!59;CL:0002253!3.08e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.18e-51;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.18e-51,12;CL:0000223,5.62e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.50e-20;31!CL:0000223;1.21e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.89e-47!19;UBERON:0006925!1.89e-47!19;UBERON:0008836!1.89e-47!19;UBERON:0008835!6.45e-41!22;UBERON:0003894!6.45e-41!22;UBERON:0009854!4.07e-39!23;UBERON:0007499!6.00e-36!25;UBERON:0009497!6.00e-36!25;UBERON:0000015!6.00e-36!25;UBERON:0002423!6.00e-36!25;UBERON:0006235!6.00e-36!25;UBERON:0004161!6.00e-36!25;UBERON:0005057!1.51e-34!26;UBERON:0009856!1.51e-34!26;UBERON:0002365!6.88e-29!31;UBERON:0002330!6.88e-29!31;UBERON:0002368!1.60e-25!35;UBERON:0003929!1.47e-20!54;UBERON:0000949!1.02e-19!45;UBERON:0005172!5.13e-16!55;UBERON:0005173!5.13e-16!55;UBERON:0002530!6.93e-15!59;UBERON:0004921!1.56e-14!129;UBERON:0004185!1.56e-14!129;UBERON:0002417!2.25e-14!61;UBERON:0000916!2.25e-14!61;UBERON:0005911!2.98e-13!82;UBERON:0001007!6.74e-12!155;UBERON:0001555!6.74e-12!155;UBERON:0007026!6.74e-12!155;UBERON:0004119!8.25e-11!169;UBERON:0000925!8.25e-11!169;UBERON:0006595!8.25e-11!169;UBERON:0001041!1.13e-08!98;UBERON:0000160!2.78e-08!27;UBERON:0000077!5.14e-08!130;UBERON:0005177!7.07e-08!107;UBERON:0000490!1.71e-07!138;UBERON:0009569!2.04e-07!113;UBERON:0002405!3.33e-07!115;UBERON:0001155!4.28e-07!9;UBERON:0003914!4.55e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.15e-63;19!UBERON:0006925;2.15e-63;19!UBERON:0002423;2.87e-48;25!UBERON:0002365;3.95e-37;31!UBERON:0002330;3.95e-37;31!UBERON:0002368;4.40e-33;33!UBERON:0000949;5.39e-24;43!UBERON:0005172;2.45e-14;52!UBERON:0005173;2.45e-14;52!UBERON:0002530;1.78e-13;57!UBERON:0002417;9.29e-12;58!UBERON:0000916;9.29e-12;58!UBERON:0001007;5.72e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.79e-63,19;UBERON:0006925,1.79e-63,19;UBERON:0008836,1.79e-63,19;UBERON:0008835,7.16e-55,22;UBERON:0003894,7.16e-55,22;UBERON:0009854,1.68e-52,23;UBERON:0007499,2.49e-48,25;UBERON:0009497,2.49e-48,25;UBERON:0000015,2.49e-48,25;UBERON:0002423,2.49e-48,25;UBERON:0006235,2.49e-48,25;UBERON:0004161,2.49e-48,25;UBERON:0009856,1.75e-46,26;UBERON:0002365,4.89e-39,31;UBERON:0002330,4.89e-39,31;UBERON:0002368,1.31e-34,35;UBERON:0000949,5.70e-27,45;UBERON:0003929,1.66e-22,54;UBERON:0005172,1.66e-22,54;UBERON:0005173,1.66e-22,54;UBERON:0002530,1.30e-20,59;UBERON:0002417,2.85e-20,60;UBERON:0000916,2.85e-20,60;UBERON:0005911,7.37e-15,82;UBERON:0001041,5.23e-14,87;UBERON:0004921,2.56e-13,118;UBERON:0005177,4.53e-12,101;UBERON:0009569,6.96e-11,112;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0003914,2.04e-10,117;UBERON:0005256,5.46e-10,122;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000490,3.20e-08,148;UBERON:0001048,1.35e-07,160;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p63@APOB | |||
}} |
Revision as of 16:26, 12 September 2013
Short description: | p63@APOB |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_63_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 343bp_to_M19734_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.18e-51 | 12 |
endodermal cell | 5.62e-11 | 58 |
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