FFCP PHASE1:Mm9::chr10:115624741..115624744,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:115624741..115624744,+|id=chr10:115624741..115624744,+|ontology_enrichment_celltype=CL:0000239!2.97e-24!6;CL:0000677!2.97e-24!6;CL:0000212!2.97e-24!6;CL:0000584!2.97e-24!6;CL:0000075!1.01e-20!7;CL:0002563!5.28e-16!9;CL:0002251!5.28e-16!9;CL:0000473!7.86e-13!3;CL:0000627!7.86e-13!3;CL:0000682!7.86e-13!3;CL:0000066!6.54e-12!25;CL:0002076!2.22e-09!15;CL:0000223!6.90e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,9.90e-38,6;CL:0000677,9.90e-38,6;CL:0000584,9.90e-38,6;CL:0000075,2.51e-32,7;CL:0002563,4.11e-25,9;CL:0002251,4.11e-25,9;CL:0000066,1.31e-19,25;CL:0000682,1.72e-19,3;CL:0002076,5.57e-15,15;CL:0000223,3.65e-11,20;CL:0000473,1.09e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.49e-37!15;UBERON:0001242!3.04e-29!13;UBERON:0000060!3.04e-29!13;UBERON:0001262!3.04e-29!13;UBERON:0004786!3.04e-29!13;UBERON:0004923!5.29e-26!24;UBERON:0003350!5.28e-16!9;UBERON:0004808!5.28e-16!9;UBERON:0001277!5.28e-16!9;UBERON:0000160!3.35e-13!43;UBERON:0000485!5.37e-13!11;UBERON:0005409!3.24e-12!59;UBERON:0000331!5.59e-12!3;UBERON:0002116!5.59e-12!3;UBERON:0001204!5.59e-12!3;UBERON:0001168!5.59e-12!3;UBERON:0001962!1.51e-09!2;UBERON:0001961!1.51e-09!2;UBERON:0001744!1.51e-09!2;UBERON:0004119!1.42e-07!130;UBERON:0000925!1.42e-07!130;UBERON:0006595!1.42e-07!130;UBERON:0007023!2.65e-07!51;UBERON:0001007!9.13e-07!128;UBERON:0001555!9.13e-07!128;UBERON:0007026!9.13e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-49,15;UBERON:0001242,5.37e-38,13;UBERON:0001262,5.37e-38,13;UBERON:0004786,5.37e-38,13;UBERON:0004923,1.10e-30,24;UBERON:0003350,4.11e-25,9;UBERON:0004808,4.11e-25,9;UBERON:0001277,4.11e-25,9;UBERON:0000485,1.63e-20,11;UBERON:0000160,1.83e-15,31;UBERON:0001962,2.90e-14,2;UBERON:0001961,2.90e-14,2;UBERON:0001744,2.90e-14,2;UBERON:0005409,6.97e-10,47;UBERON:0002465,8.19e-10,3;UBERON:0000331,6.18e-09,3;UBERON:0002116,6.18e-09,3;UBERON:0001204,6.18e-09,3;UBERON:0001168,6.18e-09,3;UBERON:0003199,5.41e-08,1;UBERON:0002108,6.45e-07,4|phase1_expression=0,3.14077866875425,8.18998630901165,1.20985684522732,2.50447864973174,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,6.65286915094793,2.29692785646008,1.7230479846363,3.66301095566011,1.14014051673824,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:115624741..115624744,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:115624741..115624744,+ | |||
|id=chr10:115624741..115624744,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.97e-24!6;CL:0000677!2.97e-24!6;CL:0000212!2.97e-24!6;CL:0000584!2.97e-24!6;CL:0000075!1.01e-20!7;CL:0002563!5.28e-16!9;CL:0002251!5.28e-16!9;CL:0000473!7.86e-13!3;CL:0000627!7.86e-13!3;CL:0000682!7.86e-13!3;CL:0000066!6.54e-12!25;CL:0002076!2.22e-09!15;CL:0000223!6.90e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.90e-38,6;CL:0000677,9.90e-38,6;CL:0000584,9.90e-38,6;CL:0000075,2.51e-32,7;CL:0002563,4.11e-25,9;CL:0002251,4.11e-25,9;CL:0000066,1.31e-19,25;CL:0000682,1.72e-19,3;CL:0002076,5.57e-15,15;CL:0000223,3.65e-11,20;CL:0000473,1.09e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.49e-37!15;UBERON:0001242!3.04e-29!13;UBERON:0000060!3.04e-29!13;UBERON:0001262!3.04e-29!13;UBERON:0004786!3.04e-29!13;UBERON:0004923!5.29e-26!24;UBERON:0003350!5.28e-16!9;UBERON:0004808!5.28e-16!9;UBERON:0001277!5.28e-16!9;UBERON:0000160!3.35e-13!43;UBERON:0000485!5.37e-13!11;UBERON:0005409!3.24e-12!59;UBERON:0000331!5.59e-12!3;UBERON:0002116!5.59e-12!3;UBERON:0001204!5.59e-12!3;UBERON:0001168!5.59e-12!3;UBERON:0001962!1.51e-09!2;UBERON:0001961!1.51e-09!2;UBERON:0001744!1.51e-09!2;UBERON:0004119!1.42e-07!130;UBERON:0000925!1.42e-07!130;UBERON:0006595!1.42e-07!130;UBERON:0007023!2.65e-07!51;UBERON:0001007!9.13e-07!128;UBERON:0001555!9.13e-07!128;UBERON:0007026!9.13e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-49,15;UBERON:0001242,5.37e-38,13;UBERON:0001262,5.37e-38,13;UBERON:0004786,5.37e-38,13;UBERON:0004923,1.10e-30,24;UBERON:0003350,4.11e-25,9;UBERON:0004808,4.11e-25,9;UBERON:0001277,4.11e-25,9;UBERON:0000485,1.63e-20,11;UBERON:0000160,1.83e-15,31;UBERON:0001962,2.90e-14,2;UBERON:0001961,2.90e-14,2;UBERON:0001744,2.90e-14,2;UBERON:0005409,6.97e-10,47;UBERON:0002465,8.19e-10,3;UBERON:0000331,6.18e-09,3;UBERON:0002116,6.18e-09,3;UBERON:0001204,6.18e-09,3;UBERON:0001168,6.18e-09,3;UBERON:0003199,5.41e-08,1;UBERON:0002108,6.45e-07,4 | |||
|phase1_expression=0,3.14077866875425,8.18998630901165,1.20985684522732,2.50447864973174,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,6.65286915094793,2.29692785646008,1.7230479846363,3.66301095566011,1.14014051673824,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:115624741..115624744,+ | |||
}} |
Revision as of 15:46, 12 September 2013
Short description: | p@chr10:115624741..115624744, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115624741..115624744, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.90e-38 | 6 |
gut absorptive cell | 9.90e-38 | 6 |
enterocyte | 9.90e-38 | 6 |
columnar/cuboidal epithelial cell | 2.51e-32 | 7 |
intestinal epithelial cell | 4.11e-25 | 9 |
epithelial cell of alimentary canal | 4.11e-25 | 9 |
epithelial cell | 1.31e-19 | 25 |
M cell of gut | 1.72e-19 | 3 |
endo-epithelial cell | 5.57e-15 | 15 |
endodermal cell | 3.65e-11 | 20 |
defensive cell | 1.09e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.10e-49 | 15 |
intestinal mucosa | 5.37e-38 | 13 |
wall of intestine | 5.37e-38 | 13 |
gastrointestinal system mucosa | 5.37e-38 | 13 |
organ component layer | 1.10e-30 | 24 |
epithelium of mucosa | 4.11e-25 | 9 |
gastrointestinal system epithelium | 4.11e-25 | 9 |
intestinal epithelium | 4.11e-25 | 9 |
simple columnar epithelium | 1.63e-20 | 11 |
intestine | 1.83e-15 | 31 |
gut-associated lymphoid tissue | 2.90e-14 | 2 |
mucosa-associated lymphoid tissue | 2.90e-14 | 2 |
lymphoid tissue | 2.90e-14 | 2 |
gastrointestinal system | 6.97e-10 | 47 |
lymphoid system | 8.19e-10 | 3 |
ileal mucosa | 6.18e-09 | 3 |
ileum | 6.18e-09 | 3 |
mucosa of small intestine | 6.18e-09 | 3 |
wall of small intestine | 6.18e-09 | 3 |
egg chamber | 5.41e-08 | 1 |
small intestine | 6.45e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.