FFCP PHASE1:Hg19::chr2:142888550..142888567,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53353|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6693|TSSclassifier=S|UniProt=E7ERG8|association_with_transcript=6bp_to_ENST00000434794_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_LRP1B_5end|id=chr2:142888550..142888567,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;1.00e-07;5|ontology_enrichment_celltype_v019_2=CL:0000097,9.71e-08,5;CL:0002028,9.71e-08,5|ontology_enrichment_development_v019=UBERON:0006601;9.37e-18;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!9.27e-45!86;UBERON:0000073!9.65e-45!94;UBERON:0001016!9.65e-45!94;UBERON:0001049!1.71e-44!57;UBERON:0005068!1.71e-44!57;UBERON:0006241!1.71e-44!57;UBERON:0007135!1.71e-44!57;UBERON:0001017!2.90e-44!82;UBERON:0002616!8.52e-42!59;UBERON:0000955!2.33e-40!69;UBERON:0006238!2.33e-40!69;UBERON:0002346!2.81e-39!90;UBERON:0003075!3.26e-36!86;UBERON:0007284!3.26e-36!86;UBERON:0002780!3.29e-35!41;UBERON:0001890!3.29e-35!41;UBERON:0006240!3.29e-35!41;UBERON:0003080!6.89e-34!42;UBERON:0007023!2.38e-33!115;UBERON:0000924!4.83e-31!173;UBERON:0006601!4.83e-31!173;UBERON:0002020!4.20e-30!34;UBERON:0003528!4.20e-30!34;UBERON:0001893!6.41e-30!34;UBERON:0002791!4.16e-29!33;UBERON:0004121!1.59e-28!169;UBERON:0000033!1.84e-28!123;UBERON:0000153!2.24e-28!129;UBERON:0007811!2.24e-28!129;UBERON:0001869!2.42e-28!32;UBERON:0003056!2.91e-27!61;UBERON:0000956!8.90e-23!25;UBERON:0000203!8.90e-23!25;UBERON:0002619!6.96e-21!22;UBERON:0001950!4.14e-19!20;UBERON:0000481!1.97e-14!347;UBERON:0000062!1.30e-12!511;UBERON:0000922!4.16e-12!612;UBERON:0003076!1.84e-11!15;UBERON:0003057!1.84e-11!15;UBERON:0000477!3.53e-11!286;UBERON:0000475!4.52e-11!365;UBERON:0002050!4.74e-11!605;UBERON:0005423!4.74e-11!605;UBERON:0000468!6.25e-11!659;UBERON:0000923!9.66e-11!604;UBERON:0005291!9.66e-11!604;UBERON:0006598!9.66e-11!604;UBERON:0002532!9.66e-11!604;UBERON:0004732!7.71e-10!13;UBERON:0000064!2.63e-09!219;UBERON:0004733!5.06e-09!12;UBERON:0002028!5.06e-09!12;UBERON:0007277!5.06e-09!12;UBERON:0002420!8.00e-09!9;UBERON:0007245!8.00e-09!9;UBERON:0010009!8.00e-09!9;UBERON:0010011!8.00e-09!9;UBERON:0000454!8.00e-09!9;UBERON:0002308!1.01e-08!9;UBERON:0000125!1.01e-08!9;UBERON:0001871!5.35e-08!7;UBERON:0004111!1.16e-07!241;UBERON:0000025!1.37e-07!194;UBERON:0000467!4.45e-07!625;UBERON:0009663!4.81e-07!7;UBERON:0000480!5.64e-07!626|ontology_enrichment_uberon_v019=UBERON:0003528;1.66e-43;34!UBERON:0002020;1.66e-43;34!UBERON:0002791;2.02e-43;32!UBERON:0001869;2.04e-43;32!UBERON:0001893;2.99e-43;34!UBERON:0002780;1.07e-42;41!UBERON:0001890;1.07e-42;41!UBERON:0000073;9.78e-39;53!UBERON:0002616;9.78e-39;53!UBERON:0000956;3.40e-38;25!UBERON:0000203;3.40e-38;25!UBERON:0002619;6.70e-35;22!UBERON:0001950;7.77e-32;20!UBERON:0000955;5.08e-28;68!UBERON:0001017;1.54e-26;75!UBERON:0001016;5.91e-26;83!UBERON:0002420;5.62e-14;9!UBERON:0007245;5.62e-14;9!UBERON:0010009;5.62e-14;9!UBERON:0010011;5.62e-14;9!UBERON:0000454;5.62e-14;9!UBERON:0000125;7.01e-14;9!UBERON:0002308;7.01e-14;9!UBERON:0007023;1.11e-13;114!UBERON:0004732;1.44e-11;13!UBERON:0001871;3.57e-11;6!UBERON:0009663;5.63e-11;7!UBERON:0001894;2.26e-10;7!UBERON:0000200;2.41e-10;6!UBERON:0004733;2.98e-10;12!UBERON:0002028;2.98e-10;12!UBERON:0002298;5.73e-10;6!UBERON:0011216;1.07e-09;132!UBERON:0002021;4.44e-09;5!UBERON:0000349;5.16e-09;5!UBERON:0001872;6.10e-09;5!UBERON:0002050;1.49e-07;5!UBERON:0005423;1.49e-07;5!UBERON:0000369;5.72e-07;4!UBERON:0002435;5.72e-07;4!UBERON:0000204;5.72e-07;4!UBERON:0002346;9.65e-07;4!UBERON:0000923;9.65e-07;4!UBERON:0010316;9.65e-07;4!UBERON:0005291;9.65e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.05e-73,56;UBERON:0005068,9.05e-73,56;UBERON:0006241,9.05e-73,56;UBERON:0007135,9.05e-73,56;UBERON:0000073,3.43e-68,53;UBERON:0002616,3.43e-68,53;UBERON:0001017,7.42e-65,81;UBERON:0001016,7.83e-63,89;UBERON:0000955,6.99e-60,68;UBERON:0006238,6.99e-60,68;UBERON:0002780,1.37e-59,41;UBERON:0001890,1.37e-59,41;UBERON:0003080,1.37e-59,41;UBERON:0006240,1.37e-59,41;UBERON:0002346,2.34e-54,86;UBERON:0003528,9.36e-51,34;UBERON:0002020,9.36e-51,34;UBERON:0001893,1.95e-50,34;UBERON:0003075,2.49e-49,82;UBERON:0007284,2.49e-49,82;UBERON:0002791,9.45e-48,32;UBERON:0001869,1.04e-47,32;UBERON:0007023,1.32e-40,114;UBERON:0003056,2.93e-39,61;UBERON:0000956,4.36e-38,25;UBERON:0000203,4.36e-38,25;UBERON:0010371,8.87e-38,104;UBERON:0004121,1.72e-35,171;UBERON:0000924,1.72e-35,171;UBERON:0006601,1.72e-35,171;UBERON:0002619,8.13e-35,22;UBERON:0011216,8.13e-32,223;UBERON:0001950,9.41e-32,20;UBERON:0010314,1.94e-28,132;UBERON:0000025,2.84e-15,192;UBERON:0003076,3.33e-14,15;UBERON:0003057,3.33e-14,15;UBERON:0002420,4.90e-14,9;UBERON:0007245,4.90e-14,9;UBERON:0010009,4.90e-14,9;UBERON:0010011,4.90e-14,9;UBERON:0000454,4.90e-14,9;UBERON:0000125,7.28e-14,9;UBERON:0002308,7.28e-14,9;UBERON:0004732,1.50e-11,13;UBERON:0004111,2.69e-11,240;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=53353 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6693 | |||
|TSSclassifier=S | |||
|UniProt=E7ERG8 | |||
|association_with_transcript=6bp_to_ENST00000434794_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LRP1B_5end | |||
|id=chr2:142888550..142888567,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.71e-08,5;CL:0002028,9.71e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.37e-18;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@LRP1B | |||
}} |
Revision as of 13:42, 12 September 2013
Short description: | p2@LRP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRP1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 6bp_to_ENST00000434794_5end |
EntrezGene: | LRP1B |
HGNC: | 6693 |
UniProt: | E7ERG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.71e-08 | 5 |
basophil mast progenitor cell | 9.71e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.