FFCP PHASE1:Hg19::chr21:42519981..42519997,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=284835|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=19720|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_NR_024100,uc002yyv.1_5end|coexpression_cluster_id=C162|description=CAGE_peak_1_at_LINC00323_5end|id=chr21:42519981..42519997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;2.09e-27;3!UBERON:0003057;2.09e-27;3!UBERON:0006601;1.54e-12;82!UBERON:0005425;2.07e-10;1!UBERON:0006222;2.97e-10;1!UBERON:0002532;8.64e-07;206!UBERON:0010316;8.64e-07;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.42e-79!57;UBERON:0005068!3.42e-79!57;UBERON:0006241!3.42e-79!57;UBERON:0007135!3.42e-79!57;UBERON:0001017!7.05e-64!82;UBERON:0002616!1.91e-61!59;UBERON:0005743!1.19e-60!86;UBERON:0000955!6.50e-59!69;UBERON:0006238!6.50e-59!69;UBERON:0000073!5.67e-58!94;UBERON:0001016!5.67e-58!94;UBERON:0003075!5.87e-54!86;UBERON:0007284!5.87e-54!86;UBERON:0002346!2.80e-51!90;UBERON:0002780!7.32e-50!41;UBERON:0001890!7.32e-50!41;UBERON:0006240!7.32e-50!41;UBERON:0003080!1.39e-48!42;UBERON:0007023!1.42e-47!115;UBERON:0002020!1.53e-44!34;UBERON:0003528!1.53e-44!34;UBERON:0001893!2.14e-44!34;UBERON:0002791!7.34e-41!33;UBERON:0001869!2.83e-37!32;UBERON:0002308!1.98e-33!9;UBERON:0000125!1.98e-33!9;UBERON:0000033!8.44e-33!123;UBERON:0003056!3.89e-32!61;UBERON:0003076!4.27e-32!15;UBERON:0003057!4.27e-32!15;UBERON:0000153!5.56e-31!129;UBERON:0007811!5.56e-31!129;UBERON:0002298!2.04e-30!8;UBERON:0004121!1.67e-29!169;UBERON:0000924!1.15e-28!173;UBERON:0006601!1.15e-28!173;UBERON:0002420!5.19e-25!9;UBERON:0007245!5.19e-25!9;UBERON:0010009!5.19e-25!9;UBERON:0010011!5.19e-25!9;UBERON:0000454!5.19e-25!9;UBERON:0001950!9.29e-25!20;UBERON:0009663!3.83e-24!7;UBERON:0004732!7.85e-24!13;UBERON:0002619!2.03e-22!22;UBERON:0000025!3.70e-20!194;UBERON:0004733!7.73e-20!12;UBERON:0002028!7.73e-20!12;UBERON:0007277!7.73e-20!12;UBERON:0000956!1.38e-19!25;UBERON:0000203!1.38e-19!25;UBERON:0002240!3.64e-16!3;UBERON:0004111!4.57e-16!241;UBERON:0001896!4.67e-16!3;UBERON:0005290!4.67e-16!3;UBERON:0010096!4.67e-16!3;UBERON:0000988!4.91e-16!3;UBERON:0006331!7.32e-16!3;UBERON:0000477!1.66e-14!286;UBERON:0005162!2.59e-11!2;UBERON:0000122!2.59e-11!2;UBERON:0002148!2.86e-11!2;UBERON:0009662!2.86e-11!2;UBERON:0000369!5.49e-11!4;UBERON:0002435!5.49e-11!4;UBERON:0000204!5.49e-11!4;UBERON:0010082!5.49e-11!4;UBERON:0001897!5.75e-11!2;UBERON:0001875!5.75e-11!2;UBERON:0006514!5.75e-11!2;UBERON:0000483!5.81e-11!309;UBERON:0000119!8.68e-11!312;UBERON:0000475!1.25e-10!365;UBERON:0000064!6.87e-10!219;UBERON:0005174!7.01e-10!5;UBERON:0001137!7.01e-10!5;UBERON:0001872!3.64e-09!5;UBERON:0002021!3.96e-09!5;UBERON:0002680!4.06e-09!9;UBERON:0001895!4.06e-09!9;UBERON:0010092!4.06e-09!9;UBERON:0000200!1.09e-07!6;UBERON:0000062!2.52e-07!511;UBERON:0005383!4.69e-07!3;UBERON:0005382!4.69e-07!3;UBERON:0001894!5.35e-07!7;UBERON:0006222!5.35e-07!7|ontology_enrichment_uberon_v019=UBERON:0002298;1.32e-52;6!UBERON:0004732;1.02e-32;13!UBERON:0002240;2.09e-27;3!UBERON:0005174;2.09e-27;3!UBERON:0001137;2.09e-27;3!UBERON:0001896;3.12e-27;3!UBERON:0005290;3.12e-27;3!UBERON:0000988;3.40e-27;3!UBERON:0004733;3.71e-26;12!UBERON:0002028;3.71e-26;12!UBERON:0000073;3.48e-25;53!UBERON:0002616;3.48e-25;53!UBERON:0000125;4.75e-24;9!UBERON:0002308;4.75e-24;9!UBERON:0001017;2.91e-20;75!UBERON:0005162;7.68e-19;2!UBERON:0000122;7.68e-19;2!UBERON:0002148;1.00e-18;2!UBERON:0006331;1.00e-18;2!UBERON:0009662;1.00e-18;2!UBERON:0001897;3.45e-18;2!UBERON:0010225;3.45e-18;2!UBERON:0001875;3.76e-18;2!UBERON:0006514;3.76e-18;2!UBERON:0001016;3.85e-18;83!UBERON:0002780;7.41e-18;41!UBERON:0001890;7.41e-18;41!UBERON:0000955;1.91e-15;68!UBERON:0001894;8.92e-12;7!UBERON:0001893;1.01e-11;34!UBERON:0009663;1.18e-11;7!UBERON:0007023;1.61e-11;114!UBERON:0000941;2.07e-10;1!UBERON:0001785;2.07e-10;1!UBERON:0002464;2.07e-10;1!UBERON:0004904;2.07e-10;1!UBERON:0001021;2.07e-10;1!UBERON:0002336;3.55e-10;1!UBERON:0011215;3.55e-10;1!UBERON:0001018;3.55e-10;1!UBERON:0002473;3.55e-10;1!UBERON:0005340;3.55e-10;1!UBERON:0003544;3.55e-10;1!UBERON:0005970;3.55e-10;1!UBERON:0002316;3.55e-10;1!UBERON:0001020;3.55e-10;1!UBERON:0002437;3.55e-10;1!UBERON:0002038;5.30e-10;1!UBERON:0009661;5.30e-10;1!UBERON:0002950;5.30e-10;1!UBERON:0001891;5.30e-10;1!UBERON:0003528;5.52e-10;34!UBERON:0002020;5.52e-10;34!UBERON:0002581;9.40e-10;1!UBERON:0007190;9.40e-10;1!UBERON:0002784;1.46e-09;4!UBERON:0002680;1.90e-09;9!UBERON:0001895;1.90e-09;9!UBERON:0002420;3.50e-09;9!UBERON:0007245;3.50e-09;9!UBERON:0010009;3.50e-09;9!UBERON:0010011;3.50e-09;9!UBERON:0000454;3.50e-09;9!UBERON:0002791;2.99e-08;32!UBERON:0001869;4.18e-08;32!UBERON:0001872;1.17e-07;5!UBERON:0011216;1.23e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-57,56;UBERON:0005068,1.05e-57,56;UBERON:0006241,1.05e-57,56;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=284835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19720 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_024100,uc002yyv.1_5end | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_1_at_LINC00323_5end | |||
|id=chr21:42519981..42519997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.09e-27;3!UBERON:0003057;2.09e-27;3!UBERON:0006601;1.54e-12;82!UBERON:0005425;2.07e-10;1!UBERON:0006222;2.97e-10;1!UBERON:0002532;8.64e-07;206!UBERON:0010316;8.64e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@LINC00323 | |||
}} |
Revision as of 10:27, 12 September 2013
Short description: | p1@LINC00323 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LINC00323_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | 0bp_to_NR_024100, uc002yyv.1_5end |
EntrezGene: | LINC00323 |
HGNC: | 19720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.