FFCP PHASE1:Hg19::chr20:48530230..48530244,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9825|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14681|TSSclassifier=S|UniProt=Q9UM82,A8K0S9|association_with_transcript=31bp_to_ENST00000422556,NM_001135773,uc010gie.2_5end|coexpression_cluster_id=C4|description=CAGE_peak_7_at_SPATA2_5end|id=chr20:48530230..48530244,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;8.98e-23;3!UBERON:0003057;8.98e-23;3!UBERON:0006601;8.08e-11;82!UBERON:0006215;9.11e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.73e-104!57;UBERON:0005068!3.73e-104!57;UBERON:0006241!3.73e-104!57;UBERON:0007135!3.73e-104!57;UBERON:0002616!2.32e-83!59;UBERON:0000955!1.33e-78!69;UBERON:0006238!1.33e-78!69;UBERON:0001017!2.76e-78!82;UBERON:0005743!2.10e-74!86;UBERON:0003075!4.17e-67!86;UBERON:0007284!4.17e-67!86;UBERON:0000073!7.72e-67!94;UBERON:0001016!7.72e-67!94;UBERON:0002346!7.58e-64!90;UBERON:0002780!3.36e-62!41;UBERON:0001890!3.36e-62!41;UBERON:0006240!3.36e-62!41;UBERON:0003080!1.26e-60!42;UBERON:0007023!1.97e-58!115;UBERON:0001893!6.42e-57!34;UBERON:0002020!1.09e-56!34;UBERON:0003528!1.09e-56!34;UBERON:0002791!4.67e-53!33;UBERON:0001869!9.11e-49!32;UBERON:0003076!4.52e-46!15;UBERON:0003057!4.52e-46!15;UBERON:0000033!2.55e-44!123;UBERON:0000153!5.80e-42!129;UBERON:0007811!5.80e-42!129;UBERON:0003056!2.25e-40!61;UBERON:0002619!2.54e-38!22;UBERON:0001950!1.79e-36!20;UBERON:0004121!1.53e-34!169;UBERON:0000924!1.37e-33!173;UBERON:0006601!1.37e-33!173;UBERON:0000956!1.50e-33!25;UBERON:0000203!1.50e-33!25;UBERON:0004733!1.33e-32!12;UBERON:0002028!1.33e-32!12;UBERON:0007277!1.33e-32!12;UBERON:0002298!1.20e-30!8;UBERON:0004732!5.65e-30!13;UBERON:0002308!3.72e-26!9;UBERON:0000125!3.72e-26!9;UBERON:0000025!5.60e-26!194;UBERON:0000200!1.93e-20!6;UBERON:0004111!1.61e-19!241;UBERON:0002680!1.83e-19!9;UBERON:0001895!1.83e-19!9;UBERON:0010092!1.83e-19!9;UBERON:0002420!2.70e-19!9;UBERON:0007245!2.70e-19!9;UBERON:0010009!2.70e-19!9;UBERON:0010011!2.70e-19!9;UBERON:0000454!2.70e-19!9;UBERON:0000477!1.08e-17!286;UBERON:0009663!1.29e-17!7;UBERON:0001896!2.82e-16!3;UBERON:0005290!2.82e-16!3;UBERON:0010096!2.82e-16!3;UBERON:0002240!6.66e-16!3;UBERON:0006331!7.37e-16!3;UBERON:0000988!1.05e-15!3;UBERON:0000475!3.16e-14!365;UBERON:0000064!1.19e-13!219;UBERON:0000483!1.26e-13!309;UBERON:0000119!2.00e-13!312;UBERON:0001897!1.81e-11!2;UBERON:0000369!2.13e-11!4;UBERON:0002435!2.13e-11!4;UBERON:0000204!2.13e-11!4;UBERON:0010082!2.13e-11!4;UBERON:0001870!6.75e-11!2;UBERON:0002148!6.75e-11!2;UBERON:0009662!6.75e-11!2;UBERON:0001873!9.55e-11!2;UBERON:0010122!9.55e-11!2;UBERON:0001871!5.47e-10!7;UBERON:0005174!9.86e-10!5;UBERON:0001137!9.86e-10!5;UBERON:0001872!2.05e-09!5;UBERON:0002021!2.59e-09!5;UBERON:0000349!4.72e-09!5;UBERON:0002037!5.31e-08!6;UBERON:0006215!5.31e-08!6;UBERON:0000062!6.73e-08!511;UBERON:0002771!1.81e-07!3;UBERON:0005383!1.93e-07!3;UBERON:0005382!1.93e-07!3;UBERON:0001894!3.47e-07!7;UBERON:0006222!3.47e-07!7;UBERON:0000481!6.06e-07!347|ontology_enrichment_uberon_v019=UBERON:0002298;1.30e-44;6!UBERON:0004733;1.43e-34;12!UBERON:0002028;1.43e-34;12!UBERON:0001897;1.38e-33;2!UBERON:0010225;1.38e-33;2!UBERON:0004732;6.25e-32;13!UBERON:0001896;2.10e-23;3!UBERON:0005290;2.10e-23;3!UBERON:0000988;5.15e-23;3!UBERON:0000073;8.71e-23;53!UBERON:0002616;8.71e-23;53!UBERON:0002240;8.98e-23;3!UBERON:0005174;8.98e-23;3!UBERON:0001137;8.98e-23;3!UBERON:0002336;3.16e-18;1!UBERON:0011215;3.16e-18;1!UBERON:0001018;3.16e-18;1!UBERON:0002473;3.16e-18;1!UBERON:0005340;3.16e-18;1!UBERON:0003544;3.16e-18;1!UBERON:0005970;3.16e-18;1!UBERON:0002316;3.16e-18;1!UBERON:0001020;3.16e-18;1!UBERON:0002437;3.16e-18;1!UBERON:0002038;4.44e-18;1!UBERON:0009661;4.44e-18;1!UBERON:0002950;4.44e-18;1!UBERON:0001891;4.44e-18;1!UBERON:0002784;2.38e-17;4!UBERON:0000125;2.99e-17;9!UBERON:0002308;2.99e-17;9!UBERON:0002680;3.95e-17;9!UBERON:0001895;3.95e-17;9!UBERON:0001016;2.36e-12;83!UBERON:0009663;1.94e-10;7!UBERON:0001894;2.46e-10;7!UBERON:0001017;3.90e-10;75!UBERON:0005162;8.69e-10;2!UBERON:0000122;8.69e-10;2!UBERON:0002148;1.03e-09;2!UBERON:0006331;1.03e-09;2!UBERON:0009662;1.03e-09;2!UBERON:0001875;1.57e-09;2!UBERON:0006514;1.57e-09;2!UBERON:0000955;3.53e-09;68!UBERON:0002420;2.55e-08;9!UBERON:0007245;2.55e-08;9!UBERON:0010009;2.55e-08;9!UBERON:0010011;2.55e-08;9!UBERON:0000454;2.55e-08;9!UBERON:0007023;3.87e-08;114!UBERON:0002780;8.01e-08;41!UBERON:0001890;8.01e-08;41|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.05e-53,15;UBERON:0003057,2.05e-53,15;UBERON:0002298,1.63e-44,6;UBERON:0001049,9.38e-41,56;UBERON:0005068,9.38e-41,56;UBERON:0006241,9.38e-41,56;UBERON:0007135,9.38e-41,56;UBERON:0004733,1.77e-34,12;UBERON:0002028,1.77e-34,12;UBERON:0007277,1.77e-34,12;UBERON:0001897,1.17e-33,2;UBERON:0010225,1.17e-33,2;UBERON:0004732,7.58e-32,13;UBERON:0000073,8.91e-30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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14681 | |||
|TSSclassifier=S | |||
|UniProt=Q9UM82,A8K0S9 | |||
|association_with_transcript=31bp_to_ENST00000422556,NM_001135773,uc010gie.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_SPATA2_5end | |||
|id=chr20:48530230..48530244,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.98e-23;3!UBERON:0003057;8.98e-23;3!UBERON:0006601;8.08e-11;82!UBERON:0006215;9.11e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@SPATA2 | |||
}} |
Revision as of 09:01, 12 September 2013
Short description: | p7@SPATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPATA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 31bp_to_ENST00000422556, NM_001135773, uc010gie.2_5end |
EntrezGene: | SPATA2 |
HGNC: | 14681 |
UniProt: | Q9UM82A8K0S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.