FFCP PHASE1:Hg19::chr20:21502506..21502511,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C63|description=CAGE_peak_at_chr20:21502506..21502511,-|id=chr20:21502506..21502511,-|ontology_enrichment_celltype=CL:0000167!1.30e-07!1;CL:0000164!1.30e-07!1;CL:0000502!1.30e-07!1;CL:0000172!1.30e-07!1;CL:0000173!1.30e-07!1;CL:0002351!1.30e-07!1|ontology_enrichment_celltype_v019=CL:0002535;1.80e-10;2!CL:0000123;3.13e-10;2!CL:0000242;3.13e-10;2|ontology_enrichment_celltype_v019_2=CL:0002535,1.72e-10,2;CL:0000242,2.72e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!3.23e-16!10;DOID:4430!1.30e-07!1;DOID:3095!3.10e-07!22;DOID:2994!3.10e-07!22|ontology_enrichment_disease_v019=DOID:171;3.69e-17;10!DOID:4362;1.75e-15;5!DOID:3193;1.57e-10;2!DOID:962;1.57e-10;2!DOID:3095;3.89e-08;22!DOID:2994;3.89e-08;22!DOID:1192;1.93e-07;3|ontology_enrichment_disease_v019_2=DOID:171,3.79e-17,10;DOID:4362,1.75e-15,5;DOID:3193,1.57e-10,2;DOID:962,1.57e-10,2;DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22;DOID:1192,1.93e-07,3|ontology_enrichment_uberon=UBERON:0001049!2.74e-27!57;UBERON:0005068!2.74e-27!57;UBERON:0006241!2.74e-27!57;UBERON:0007135!2.74e-27!57;UBERON:0002346!2.54e-23!90;UBERON:0002616!4.95e-23!59;UBERON:0006331!4.54e-19!3;UBERON:0002780!4.74e-19!41;UBERON:0001890!4.74e-19!41;UBERON:0006240!4.74e-19!41;UBERON:0000955!5.80e-19!69;UBERON:0006238!5.80e-19!69;UBERON:0002298!7.04e-19!8;UBERON:0000988!1.08e-18!3;UBERON:0003080!1.48e-18!42;UBERON:0001017!8.99e-18!82;UBERON:0003075!4.85e-17!86;UBERON:0007284!4.85e-17!86;UBERON:0000073!4.94e-17!94;UBERON:0001016!4.94e-17!94;UBERON:0005743!8.29e-17!86;UBERON:0000007!4.26e-14!2;UBERON:0002148!3.94e-13!2;UBERON:0009662!3.94e-13!2;UBERON:0001893!6.53e-13!34;UBERON:0002020!6.63e-13!34;UBERON:0003528!6.63e-13!34;UBERON:0000924!8.28e-13!173;UBERON:0006601!8.28e-13!173;UBERON:0003056!3.55e-12!61;UBERON:0000153!1.59e-11!129;UBERON:0007811!1.59e-11!129;UBERON:0002308!3.62e-11!9;UBERON:0000125!3.62e-11!9;UBERON:0000033!8.79e-11!123;UBERON:0002791!1.31e-10!33;UBERON:0007023!1.94e-10!115;UBERON:0003076!4.96e-10!15;UBERON:0003057!4.96e-10!15;UBERON:0000200!8.54e-10!6;UBERON:0004121!3.51e-09!169;UBERON:0001894!1.00e-08!7;UBERON:0006222!1.00e-08!7;UBERON:0001869!2.29e-08!32;UBERON:0004733!3.09e-08!12;UBERON:0002028!3.09e-08!12;UBERON:0007277!3.09e-08!12;UBERON:0002038!1.15e-07!1;UBERON:0009661!1.15e-07!1;UBERON:0001871!1.25e-07!7;UBERON:0004732!1.30e-07!13;UBERON:0002336!1.39e-07!1;UBERON:0001018!1.39e-07!1;UBERON:0002473!1.39e-07!1;UBERON:0005340!1.39e-07!1;UBERON:0002316!1.39e-07!1;UBERON:0003544!1.39e-07!1;UBERON:0001020!1.39e-07!1;UBERON:0005970!1.39e-07!1;UBERON:0002437!1.39e-07!1;UBERON:0002581!1.48e-07!1;UBERON:0001882!1.58e-07!1;UBERON:0005403!1.58e-07!1;UBERON:0002022!1.69e-07!1;UBERON:0003112!1.80e-07!1;UBERON:0000032!1.80e-07!1;UBERON:0005253!1.80e-07!1;UBERON:0003128!1.80e-07!1;UBERON:0002241!1.80e-07!1;UBERON:0001703!1.80e-07!1;UBERON:0004761!1.80e-07!1;UBERON:0009617!1.80e-07!1;UBERON:0003296!1.80e-07!4;UBERON:0010133!1.80e-07!4;UBERON:0001950!2.89e-07!20;UBERON:0007190!2.98e-07!1;UBERON:0002420!9.65e-07!9;UBERON:0007245!9.65e-07!9;UBERON:0010009!9.65e-07!9;UBERON:0010011!9.65e-07!9;UBERON:0000454!9.65e-07!9|ontology_enrichment_uberon_v019=UBERON:0000007;1.08e-36;2!UBERON:0002346;2.59e-19;4!UBERON:0000923;2.59e-19;4!UBERON:0010316;2.59e-19;4!UBERON:0005291;2.59e-19;4!UBERON:0003296;6.47e-19;4!UBERON:0010133;6.47e-19;4!UBERON:0002050;1.17e-15;5!UBERON:0005423;1.17e-15;5!UBERON:0000002;4.52e-13;6!UBERON:0001560;4.52e-13;6!UBERON:0001894;3.06e-11;7!UBERON:0003714;1.57e-10;2!UBERON:0006955;1.80e-10;2!UBERON:0004801;1.80e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.42e-36,2;UBERON:0003296,7.41e-19,4;UBERON:0010133,7.41e-19,4;UBERON:0000002,4.52e-13,6;UBERON:0001560,4.52e-13,6;UBERON:0001894,3.30e-11,7;UBERON:0006222,3.30e-11,7;UBERON:0003714,1.57e-10,2;UBERON:0006955,1.72e-10,2;UBERON:0004801,1.72e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr20:21502506..21502511,- | |||
|id=chr20:21502506..21502511,- | |||
|ontology_enrichment_celltype=CL:0000167!1.30e-07!1;CL:0000164!1.30e-07!1;CL:0000502!1.30e-07!1;CL:0000172!1.30e-07!1;CL:0000173!1.30e-07!1;CL:0002351!1.30e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.80e-10;2!CL:0000123;3.13e-10;2!CL:0000242;3.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.72e-10,2;CL:0000242,2.72e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.23e-16!10;DOID:4430!1.30e-07!1;DOID:3095!3.10e-07!22;DOID:2994!3.10e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;3.69e-17;10!DOID:4362;1.75e-15;5!DOID:3193;1.57e-10;2!DOID:962;1.57e-10;2!DOID:3095;3.89e-08;22!DOID:2994;3.89e-08;22!DOID:1192;1.93e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.79e-17,10;DOID:4362,1.75e-15,5;DOID:3193,1.57e-10,2;DOID:962,1.57e-10,2;DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22;DOID:1192,1.93e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.74e-27!57;UBERON:0005068!2.74e-27!57;UBERON:0006241!2.74e-27!57;UBERON:0007135!2.74e-27!57;UBERON:0002346!2.54e-23!90;UBERON:0002616!4.95e-23!59;UBERON:0006331!4.54e-19!3;UBERON:0002780!4.74e-19!41;UBERON:0001890!4.74e-19!41;UBERON:0006240!4.74e-19!41;UBERON:0000955!5.80e-19!69;UBERON:0006238!5.80e-19!69;UBERON:0002298!7.04e-19!8;UBERON:0000988!1.08e-18!3;UBERON:0003080!1.48e-18!42;UBERON:0001017!8.99e-18!82;UBERON:0003075!4.85e-17!86;UBERON:0007284!4.85e-17!86;UBERON:0000073!4.94e-17!94;UBERON:0001016!4.94e-17!94;UBERON:0005743!8.29e-17!86;UBERON:0000007!4.26e-14!2;UBERON:0002148!3.94e-13!2;UBERON:0009662!3.94e-13!2;UBERON:0001893!6.53e-13!34;UBERON:0002020!6.63e-13!34;UBERON:0003528!6.63e-13!34;UBERON:0000924!8.28e-13!173;UBERON:0006601!8.28e-13!173;UBERON:0003056!3.55e-12!61;UBERON:0000153!1.59e-11!129;UBERON:0007811!1.59e-11!129;UBERON:0002308!3.62e-11!9;UBERON:0000125!3.62e-11!9;UBERON:0000033!8.79e-11!123;UBERON:0002791!1.31e-10!33;UBERON:0007023!1.94e-10!115;UBERON:0003076!4.96e-10!15;UBERON:0003057!4.96e-10!15;UBERON:0000200!8.54e-10!6;UBERON:0004121!3.51e-09!169;UBERON:0001894!1.00e-08!7;UBERON:0006222!1.00e-08!7;UBERON:0001869!2.29e-08!32;UBERON:0004733!3.09e-08!12;UBERON:0002028!3.09e-08!12;UBERON:0007277!3.09e-08!12;UBERON:0002038!1.15e-07!1;UBERON:0009661!1.15e-07!1;UBERON:0001871!1.25e-07!7;UBERON:0004732!1.30e-07!13;UBERON:0002336!1.39e-07!1;UBERON:0001018!1.39e-07!1;UBERON:0002473!1.39e-07!1;UBERON:0005340!1.39e-07!1;UBERON:0002316!1.39e-07!1;UBERON:0003544!1.39e-07!1;UBERON:0001020!1.39e-07!1;UBERON:0005970!1.39e-07!1;UBERON:0002437!1.39e-07!1;UBERON:0002581!1.48e-07!1;UBERON:0001882!1.58e-07!1;UBERON:0005403!1.58e-07!1;UBERON:0002022!1.69e-07!1;UBERON:0003112!1.80e-07!1;UBERON:0000032!1.80e-07!1;UBERON:0005253!1.80e-07!1;UBERON:0003128!1.80e-07!1;UBERON:0002241!1.80e-07!1;UBERON:0001703!1.80e-07!1;UBERON:0004761!1.80e-07!1;UBERON:0009617!1.80e-07!1;UBERON:0003296!1.80e-07!4;UBERON:0010133!1.80e-07!4;UBERON:0001950!2.89e-07!20;UBERON:0007190!2.98e-07!1;UBERON:0002420!9.65e-07!9;UBERON:0007245!9.65e-07!9;UBERON:0010009!9.65e-07!9;UBERON:0010011!9.65e-07!9;UBERON:0000454!9.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.08e-36;2!UBERON:0002346;2.59e-19;4!UBERON:0000923;2.59e-19;4!UBERON:0010316;2.59e-19;4!UBERON:0005291;2.59e-19;4!UBERON:0003296;6.47e-19;4!UBERON:0010133;6.47e-19;4!UBERON:0002050;1.17e-15;5!UBERON:0005423;1.17e-15;5!UBERON:0000002;4.52e-13;6!UBERON:0001560;4.52e-13;6!UBERON:0001894;3.06e-11;7!UBERON:0003714;1.57e-10;2!UBERON:0006955;1.80e-10;2!UBERON:0004801;1.80e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.42e-36,2;UBERON:0003296,7.41e-19,4;UBERON:0010133,7.41e-19,4;UBERON:0000002,4.52e-13,6;UBERON:0001560,4.52e-13,6;UBERON:0001894,3.30e-11,7;UBERON:0006222,3.30e-11,7;UBERON:0003714,1.57e-10,2;UBERON:0006955,1.72e-10,2;UBERON:0004801,1.72e-10,2 | |||
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|short_description=p@chr20:21502506..21502511,- | |||
}} |
Revision as of 07:44, 12 September 2013
Short description: | p@chr20:21502506..21502511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:21502506..21502511, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.72e-10 | 2 |
Merkel cell | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.42e-36 | 2 |
gland of diencephalon | 7.41e-19 | 4 |
neuroendocrine gland | 7.41e-19 | 4 |
uterine cervix | 4.52e-13 | 6 |
neck of organ | 4.52e-13 | 6 |
diencephalon | 3.30e-11 | 7 |
future diencephalon | 3.30e-11 | 7 |
neural tissue | 1.57e-10 | 2 |
uterine epithelium | 1.72e-10 | 2 |
cervix epithelium | 1.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.79e-17 | 10 |
cervical cancer | 1.75e-15 | 5 |
peripheral nerve sheath neoplasm | 1.57e-10 | 2 |
neurofibroma | 1.57e-10 | 2 |
germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |
peripheral nervous system neoplasm | 1.93e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.