FFCP PHASE1:Hg19::chr1:70032805..70032831,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=18531|TSSclassifier=S|UniProt=Q96NW7|association_with_transcript=-36bp_to_uc001deo.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_6_at_LRRC7_5end|id=chr1:70032805..70032831,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;7.38e-10;82!UBERON:0010122;4.19e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!3.87e-45!86;UBERON:0001017!2.08e-43!82;UBERON:0000073!4.62e-43!94;UBERON:0001016!4.62e-43!94;UBERON:0001049!3.15e-40!57;UBERON:0005068!3.15e-40!57;UBERON:0006241!3.15e-40!57;UBERON:0007135!3.15e-40!57;UBERON:0000955!6.41e-36!69;UBERON:0006238!6.41e-36!69;UBERON:0002780!1.97e-35!41;UBERON:0001890!1.97e-35!41;UBERON:0006240!1.97e-35!41;UBERON:0001893!3.34e-35!34;UBERON:0002020!8.09e-35!34;UBERON:0003528!8.09e-35!34;UBERON:0003075!1.91e-34!86;UBERON:0007284!1.91e-34!86;UBERON:0003080!2.82e-34!42;UBERON:0002791!5.45e-34!33;UBERON:0001869!3.02e-33!32;UBERON:0002616!6.60e-33!59;UBERON:0002346!4.99e-32!90;UBERON:0007023!9.22e-30!115;UBERON:0002619!4.03e-29!22;UBERON:0001950!8.67e-27!20;UBERON:0003056!5.50e-26!61;UBERON:0000956!1.03e-24!25;UBERON:0000203!1.03e-24!25;UBERON:0004121!1.03e-22!169;UBERON:0000153!1.10e-21!129;UBERON:0007811!1.10e-21!129;UBERON:0000924!1.20e-21!173;UBERON:0006601!1.20e-21!173;UBERON:0000033!6.42e-21!123;UBERON:0000064!1.29e-12!219;UBERON:0002420!4.89e-12!9;UBERON:0007245!4.89e-12!9;UBERON:0010009!4.89e-12!9;UBERON:0010011!4.89e-12!9;UBERON:0000454!4.89e-12!9;UBERON:0002308!1.56e-11!9;UBERON:0000125!1.56e-11!9;UBERON:0001871!4.55e-11!7;UBERON:0000025!9.42e-11!194;UBERON:0009663!1.10e-09!7;UBERON:0000200!1.07e-08!6;UBERON:0000062!3.03e-08!511;UBERON:0000475!4.00e-08!365;UBERON:0002021!9.69e-08!5;UBERON:0000349!1.50e-07!5;UBERON:0003076!1.56e-07!15;UBERON:0003057!1.56e-07!15;UBERON:0001872!1.67e-07!5;UBERON:0000481!1.75e-07!347;UBERON:0000483!1.95e-07!309;UBERON:0004111!3.51e-07!241;UBERON:0000119!3.57e-07!312;UBERON:0000369!9.45e-07!4;UBERON:0002435!9.45e-07!4;UBERON:0000204!9.45e-07!4;UBERON:0010082!9.45e-07!4|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-63;32!UBERON:0001893;5.20e-61;34!UBERON:0002619;1.69e-60;22!UBERON:0002791;6.83e-60;32!UBERON:0001950;1.88e-55;20!UBERON:0003528;3.86e-54;34!UBERON:0002020;3.86e-54;34!UBERON:0000956;9.68e-53;25!UBERON:0000203;9.68e-53;25!UBERON:0002780;1.78e-48;41!UBERON:0001890;1.78e-48;41!UBERON:0000073;2.73e-29;53!UBERON:0002616;2.73e-29;53!UBERON:0001017;7.87e-23;75!UBERON:0000955;1.15e-21;68!UBERON:0002420;2.44e-19;9!UBERON:0007245;2.44e-19;9!UBERON:0010009;2.44e-19;9!UBERON:0010011;2.44e-19;9!UBERON:0000454;2.44e-19;9!UBERON:0001871;2.99e-19;6!UBERON:0001016;1.71e-17;83!UBERON:0000200;7.99e-17;6!UBERON:0002021;1.05e-14;5!UBERON:0009663;1.45e-14;7!UBERON:0001872;3.24e-14;5!UBERON:0000349;3.99e-14;5!UBERON:0000369;1.36e-12;4!UBERON:0002435;1.36e-12;4!UBERON:0000204;1.36e-12;4!UBERON:0000125;3.73e-11;9!UBERON:0002308;3.73e-11;9!UBERON:0005383;6.40e-10;3!UBERON:0005382;6.40e-10;3!UBERON:0001870;2.73e-09;3!UBERON:0011216;1.65e-08;132!UBERON:0001873;4.19e-07;2!UBERON:0002771;5.78e-07;2!UBERON:0007023;7.08e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001893,3.92e-71,34;UBERON:0001869,4.39e-71,32;UBERON:0002791,3.80e-66,32;UBERON:0002780,4.89e-66,41;UBERON:0001890,4.89e-66,41;UBERON:0003080,4.89e-66,41;UBERON:0006240,4.89e-66,41;UBERON:0003528,7.04e-62,34;UBERON:0002020,7.04e-62,34;UBERON:0002619,1.93e-60,22;UBERON:0001950,1.96e-55,20;UBERON:0001017,2.88e-53,81;UBERON:0000956,1.09e-52,25;UBERON:0000203,1.09e-52,25;UBERON:0000073,2.07e-52,53;UBERON:0002616,2.07e-52,53;UBERON:0001049,3.94e-52,56;UBERON:0005068,3.94e-52,56;UBERON:0006241,3.94e-52,56;UBERON:0007135,3.94e-52,56;UBERON:0001016,2.51e-49,89;UBERON:0000955,1.44e-46,68;UBERON:0006238,1.44e-46,68;UBERON:0003056,1.15e-41,61;UBERON:0003075,1.05e-32,82;UBERON:0007284,1.05e-32,82;UBERON:0002346,9.40e-31,86;UBERON:0010371,2.13e-25,104;UBERON:0011216,2.08e-23,223;UBERON:0004121,1.06e-21,171;UBERON:0000924,1.06e-21,171;UBERON:0006601,1.06e-21,171;UBERON:0007023,1.33e-19,114;UBERON:0002420,1.45e-19,9;UBERON:0007245,1.45e-19,9;UBERON:0010009,1.45e-19,9;UBERON:0010011,1.45e-19,9;UBERON:0000454,1.45e-19,9;UBERON:0010314,1.96e-19,132;UBERON:0001871,2.77e-19,6;UBERON:0000200,9.90e-17,6;UBERON:0002021,1.06e-14,5;UBERON:0009663,1.26e-14,7;UBERON:0000349,2.68e-14,5;UBERON:0001872,3.35e-14,5;UBERON:0000369,1.31e-12,4;UBERON:0002435,1.31e-12,4;UBERON:0000204,1.31e-12,4;UBERON:0010082,1.31e-12,4;UBERON:0000025,5.04e-12,192;UBERON:0000125,3.36e-11,9;UBERON:0002308,3.36e-11,9;UBERON:0005383,6.51e-10,3;UBERON:0005382,6.51e-10,3;UBERON:0001870,2.90e-09,3;UBERON:0004111,8.84e-08,240;UBERON:0001873,4.26e-07,2;UBERON:0010122,4.26e-07,2;UBERON:0002771,6.79e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=18531 | |||
|TSSclassifier=S | |||
|UniProt=Q96NW7 | |||
|association_with_transcript=-36bp_to_uc001deo.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_LRRC7_5end | |||
|id=chr1:70032805..70032831,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.38e-10;82!UBERON:0010122;4.19e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@LRRC7 | |||
}} |
Revision as of 06:38, 12 September 2013
Short description: | p6@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -36bp_to_uc001deo.1_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | Q96NW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.