FFCP PHASE1:Hg19::chr1:243858974..243858986,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=393|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_ENST00000491219_5end|coexpression_cluster_id=C10|description=CAGE_peak_21_at_AKT3_5end|id=chr1:243858974..243858986,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;3.35e-11;2|ontology_enrichment_celltype_v019_2=CL:0000047,7.30e-11,8|ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!2.27e-25!34;UBERON:0001869!8.93e-25!32;UBERON:0002780!3.09e-24!41;UBERON:0001890!3.09e-24!41;UBERON:0006240!3.09e-24!41;UBERON:0002791!5.19e-24!33;UBERON:0003080!1.65e-23!42;UBERON:0002020!3.78e-23!34;UBERON:0003528!3.78e-23!34;UBERON:0002619!1.65e-22!22;UBERON:0000956!7.86e-22!25;UBERON:0000203!7.86e-22!25;UBERON:0001049!8.78e-21!57;UBERON:0005068!8.78e-21!57;UBERON:0006241!8.78e-21!57;UBERON:0007135!8.78e-21!57;UBERON:0001950!5.31e-19!20;UBERON:0001017!9.46e-19!82;UBERON:0000073!1.71e-17!94;UBERON:0001016!1.71e-17!94;UBERON:0005743!1.74e-17!86;UBERON:0003056!3.12e-17!61;UBERON:0002616!2.05e-16!59;UBERON:0000955!1.89e-15!69;UBERON:0006238!1.89e-15!69;UBERON:0003075!5.91e-15!86;UBERON:0007284!5.91e-15!86;UBERON:0002346!6.15e-14!90;UBERON:0007023!7.62e-11!115;UBERON:0004121!2.30e-09!169;UBERON:0000200!4.56e-09!6;UBERON:0000924!6.17e-09!173;UBERON:0006601!6.17e-09!173;UBERON:0001872!4.51e-08!5;UBERON:0000153!6.51e-08!129;UBERON:0007811!6.51e-08!129;UBERON:0000033!7.01e-08!123;UBERON:0002771!7.71e-08!3;UBERON:0002021!8.28e-08!5;UBERON:0001871!1.62e-07!7;UBERON:0000349!1.67e-07!5|ontology_enrichment_uberon_v019=UBERON:0007195;8.53e-21;1!UBERON:0001872;5.67e-17;5!UBERON:0001950;1.26e-15;20!UBERON:0002619;2.65e-14;22!UBERON:0000956;1.07e-12;25!UBERON:0000203;1.07e-12;25!UBERON:0001869;9.99e-10;32!UBERON:0003528;2.06e-09;34!UBERON:0002020;2.06e-09;34!UBERON:0000922;2.21e-09;49!UBERON:0002791;5.65e-09;32!UBERON:0001893;2.10e-08;34!UBERON:0002114;4.52e-08;2!UBERON:0002780;2.80e-07;41!UBERON:0001890;2.80e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.43e-21,1;UBERON:0001872,5.91e-17,5;UBERON:0001950,1.26e-15,20;UBERON:0002619,2.65e-14,22;UBERON:0000956,1.07e-12,25;UBERON:0000203,1.07e-12,25;UBERON:0002791,4.42e-10,32;UBERON:0001869,4.42e-10,32;UBERON:0003528,1.60e-09,34;UBERON:0002020,1.60e-09,34;UBERON:0001893,1.60e-09,34;UBERON:0001017,1.44e-08,81;UBERON:0002114,4.52e-08,2;UBERON:0002780,5.48e-08,41;UBERON:0001890,5.48e-08,41;UBERON:0003080,5.48e-08,41;UBERON:0006240,5.48e-08,41;UBERON:0001016,1.03e-07,89|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,2.60279707715243,0.773288812777695,2.68026024534958,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,11.0186194186976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=393 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000491219_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_21_at_AKT3_5end | |||
|id=chr1:243858974..243858986,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.35e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.30e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.16e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.27e-25!34;UBERON:0001869!8.93e-25!32;UBERON:0002780!3.09e-24!41;UBERON:0001890!3.09e-24!41;UBERON:0006240!3.09e-24!41;UBERON:0002791!5.19e-24!33;UBERON:0003080!1.65e-23!42;UBERON:0002020!3.78e-23!34;UBERON:0003528!3.78e-23!34;UBERON:0002619!1.65e-22!22;UBERON:0000956!7.86e-22!25;UBERON:0000203!7.86e-22!25;UBERON:0001049!8.78e-21!57;UBERON:0005068!8.78e-21!57;UBERON:0006241!8.78e-21!57;UBERON:0007135!8.78e-21!57;UBERON:0001950!5.31e-19!20;UBERON:0001017!9.46e-19!82;UBERON:0000073!1.71e-17!94;UBERON:0001016!1.71e-17!94;UBERON:0005743!1.74e-17!86;UBERON:0003056!3.12e-17!61;UBERON:0002616!2.05e-16!59;UBERON:0000955!1.89e-15!69;UBERON:0006238!1.89e-15!69;UBERON:0003075!5.91e-15!86;UBERON:0007284!5.91e-15!86;UBERON:0002346!6.15e-14!90;UBERON:0007023!7.62e-11!115;UBERON:0004121!2.30e-09!169;UBERON:0000200!4.56e-09!6;UBERON:0000924!6.17e-09!173;UBERON:0006601!6.17e-09!173;UBERON:0001872!4.51e-08!5;UBERON:0000153!6.51e-08!129;UBERON:0007811!6.51e-08!129;UBERON:0000033!7.01e-08!123;UBERON:0002771!7.71e-08!3;UBERON:0002021!8.28e-08!5;UBERON:0001871!1.62e-07!7;UBERON:0000349!1.67e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.53e-21;1!UBERON:0001872;5.67e-17;5!UBERON:0001950;1.26e-15;20!UBERON:0002619;2.65e-14;22!UBERON:0000956;1.07e-12;25!UBERON:0000203;1.07e-12;25!UBERON:0001869;9.99e-10;32!UBERON:0003528;2.06e-09;34!UBERON:0002020;2.06e-09;34!UBERON:0000922;2.21e-09;49!UBERON:0002791;5.65e-09;32!UBERON:0001893;2.10e-08;34!UBERON:0002114;4.52e-08;2!UBERON:0002780;2.80e-07;41!UBERON:0001890;2.80e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.43e-21,1;UBERON:0001872,5.91e-17,5;UBERON:0001950,1.26e-15,20;UBERON:0002619,2.65e-14,22;UBERON:0000956,1.07e-12,25;UBERON:0000203,1.07e-12,25;UBERON:0002791,4.42e-10,32;UBERON:0001869,4.42e-10,32;UBERON:0003528,1.60e-09,34;UBERON:0002020,1.60e-09,34;UBERON:0001893,1.60e-09,34;UBERON:0001017,1.44e-08,81;UBERON:0002114,4.52e-08,2;UBERON:0002780,5.48e-08,41;UBERON:0001890,5.48e-08,41;UBERON:0003080,5.48e-08,41;UBERON:0006240,5.48e-08,41;UBERON:0001016,1.03e-07,89 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,2.60279707715243,0.773288812777695,2.68026024534958,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,11.0186194186976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.128458450192919,0,0.638535436228605,0.41023272848151,3.52900374710405,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,3.12431239445539,0.413373593002368,0,7.11067251723685,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,16.144975542594,0,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,2.34640942403454,0.244482888365733,0,0,0,0 | |||
|short_description=p21@AKT3 | |||
}} |
Revision as of 04:38, 12 September 2013
Short description: | p21@AKT3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_AKT3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 31bp_to_ENST00000491219_5end |
EntrezGene: | AKT3 |
HGNC: | 393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.30e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.43e-21 | 1 |
parietal lobe | 5.91e-17 | 5 |
neocortex | 1.26e-15 | 20 |
regional part of cerebral cortex | 2.65e-14 | 22 |
cerebral cortex | 1.07e-12 | 25 |
pallium | 1.07e-12 | 25 |
regional part of telencephalon | 4.42e-10 | 32 |
cerebral hemisphere | 4.42e-10 | 32 |
brain grey matter | 1.60e-09 | 34 |
gray matter | 1.60e-09 | 34 |
telencephalon | 1.60e-09 | 34 |
central nervous system | 1.44e-08 | 81 |
duodenum | 4.52e-08 | 2 |
regional part of forebrain | 5.48e-08 | 41 |
forebrain | 5.48e-08 | 41 |
anterior neural tube | 5.48e-08 | 41 |
future forebrain | 5.48e-08 | 41 |
nervous system | 1.03e-07 | 89 |
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