FFCP PHASE1:Hg19::chr1:207262150..207262161,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=725|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1328|TSSclassifier=S|UniProt=P20851|association_with_transcript=-25bp_to_ENST00000367078_5end|coexpression_cluster_id=C106|description=CAGE_peak_9_at_C4BPB_5end|id=chr1:207262150..207262161,+|ontology_enrichment_celltype=CL:0000077!5.29e-12!19;CL:0000066!1.09e-11!254;CL:0002150!6.41e-11!3;CL:0000861!6.41e-11!3;CL:0000181!8.30e-09!12;CL:0000417!8.30e-09!12;CL:0000668!8.30e-09!12;CL:0000414!8.30e-09!12;CL:0000412!8.30e-09!12;CL:0000182!8.30e-09!12;CL:0002097!1.61e-07!2;CL:1000415!7.67e-07!2|ontology_enrichment_celltype_v019=CL:0000077;1.80e-08;19|ontology_enrichment_celltype_v019_2=CL:0000066,3.29e-10,253;CL:0000077,1.75e-08,19|ontology_enrichment_development_v019=UBERON:0008947;2.63e-27;29|ontology_enrichment_disease=DOID:305!8.27e-18!106;DOID:162!1.27e-11!235;DOID:0050687!2.75e-11!143;DOID:14566!3.52e-11!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,4.02e-14,106;DOID:0050687,6.14e-10,143;DOID:162,9.20e-10,235;DOID:14566,1.67e-09,239|ontology_enrichment_uberon=UBERON:0001737!3.08e-30!9;UBERON:0001557!4.86e-16!19;UBERON:0000077!2.43e-15!130;UBERON:0004119!1.26e-13!169;UBERON:0000925!1.26e-13!169;UBERON:0006595!1.26e-13!169;UBERON:0004921!6.33e-13!129;UBERON:0004185!6.33e-13!129;UBERON:0009497!1.04e-12!25;UBERON:0000015!1.04e-12!25;UBERON:0002423!1.04e-12!25;UBERON:0006235!1.04e-12!25;UBERON:0004161!1.04e-12!25;UBERON:0001041!2.13e-11!98;UBERON:0001007!2.14e-11!155;UBERON:0001555!2.14e-11!155;UBERON:0007026!2.14e-11!155;UBERON:0003124!1.26e-10!7;UBERON:0008947!5.23e-10!38;UBERON:0003258!5.23e-10!38;UBERON:0008835!6.25e-10!22;UBERON:0003894!6.25e-10!22;UBERON:0009854!2.00e-09!23;UBERON:0003929!3.55e-09!54;UBERON:0005911!1.14e-08!82;UBERON:0007499!1.55e-08!25;UBERON:0009856!3.83e-08!26;UBERON:0001048!1.33e-07!168;UBERON:0000065!1.59e-07!53;UBERON:0001987!2.68e-07!4;UBERON:0004340!2.68e-07!4;UBERON:0005631!3.58e-07!14;UBERON:0000158!3.58e-07!14;UBERON:0002107!3.62e-07!19;UBERON:0006925!3.62e-07!19;UBERON:0008836!3.62e-07!19;UBERON:0002294!4.10e-07!7;UBERON:0001173!4.10e-07!7;UBERON:0004912!4.10e-07!7;UBERON:0002368!5.98e-07!35|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-90;9!UBERON:0001557;2.90e-90;9!UBERON:0000072;8.45e-20;37!UBERON:0000065;1.03e-16;44!UBERON:0001004;7.75e-09;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.91e-90,9;UBERON:0001557,3.03e-42,19;UBERON:0008947,1.43e-20,38;UBERON:0003258,1.43e-20,38;UBERON:0000072,2.08e-16,47;UBERON:0001041,7.88e-15,87;UBERON:0000065,3.98e-14,54;UBERON:0004921,2.41e-10,118;UBERON:0001004,5.58e-10,74;UBERON:0001007,4.38e-08,145;UBERON:0001555,4.38e-08,145;UBERON:0007026,4.38e-08,145;UBERON:0001048,3.27e-07,160;UBERON:0004119,3.72e-07,160;UBERON:0000925,3.72e-07,160;UBERON:0006595,3.72e-07,160|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7771344043031,13.8239445864043,13.2556066435915,16.5440959098591,10.0224544282507,16.8462139568879,11.5954925017741,11.7732879075208,11.1576675514453,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12010778539254,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,2.6124209448053,5.92023468398103,3.530964653288,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3808052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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |||
|TSSclassifier=S | |||
|UniProt=P20851 | |||
|association_with_transcript=-25bp_to_ENST00000367078_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_9_at_C4BPB_5end | |||
|id=chr1:207262150..207262161,+ | |||
|ontology_enrichment_celltype=CL:0000077!5.29e-12!19;CL:0000066!1.09e-11!254;CL:0002150!6.41e-11!3;CL:0000861!6.41e-11!3;CL:0000181!8.30e-09!12;CL:0000417!8.30e-09!12;CL:0000668!8.30e-09!12;CL:0000414!8.30e-09!12;CL:0000412!8.30e-09!12;CL:0000182!8.30e-09!12;CL:0002097!1.61e-07!2;CL:1000415!7.67e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.80e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.29e-10,253;CL:0000077,1.75e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.63e-27;29 | |||
|ontology_enrichment_disease=DOID:305!8.27e-18!106;DOID:162!1.27e-11!235;DOID:0050687!2.75e-11!143;DOID:14566!3.52e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.02e-14,106;DOID:0050687,6.14e-10,143;DOID:162,9.20e-10,235;DOID:14566,1.67e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.08e-30!9;UBERON:0001557!4.86e-16!19;UBERON:0000077!2.43e-15!130;UBERON:0004119!1.26e-13!169;UBERON:0000925!1.26e-13!169;UBERON:0006595!1.26e-13!169;UBERON:0004921!6.33e-13!129;UBERON:0004185!6.33e-13!129;UBERON:0009497!1.04e-12!25;UBERON:0000015!1.04e-12!25;UBERON:0002423!1.04e-12!25;UBERON:0006235!1.04e-12!25;UBERON:0004161!1.04e-12!25;UBERON:0001041!2.13e-11!98;UBERON:0001007!2.14e-11!155;UBERON:0001555!2.14e-11!155;UBERON:0007026!2.14e-11!155;UBERON:0003124!1.26e-10!7;UBERON:0008947!5.23e-10!38;UBERON:0003258!5.23e-10!38;UBERON:0008835!6.25e-10!22;UBERON:0003894!6.25e-10!22;UBERON:0009854!2.00e-09!23;UBERON:0003929!3.55e-09!54;UBERON:0005911!1.14e-08!82;UBERON:0007499!1.55e-08!25;UBERON:0009856!3.83e-08!26;UBERON:0001048!1.33e-07!168;UBERON:0000065!1.59e-07!53;UBERON:0001987!2.68e-07!4;UBERON:0004340!2.68e-07!4;UBERON:0005631!3.58e-07!14;UBERON:0000158!3.58e-07!14;UBERON:0002107!3.62e-07!19;UBERON:0006925!3.62e-07!19;UBERON:0008836!3.62e-07!19;UBERON:0002294!4.10e-07!7;UBERON:0001173!4.10e-07!7;UBERON:0004912!4.10e-07!7;UBERON:0002368!5.98e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-90;9!UBERON:0001557;2.90e-90;9!UBERON:0000072;8.45e-20;37!UBERON:0000065;1.03e-16;44!UBERON:0001004;7.75e-09;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.91e-90,9;UBERON:0001557,3.03e-42,19;UBERON:0008947,1.43e-20,38;UBERON:0003258,1.43e-20,38;UBERON:0000072,2.08e-16,47;UBERON:0001041,7.88e-15,87;UBERON:0000065,3.98e-14,54;UBERON:0004921,2.41e-10,118;UBERON:0001004,5.58e-10,74;UBERON:0001007,4.38e-08,145;UBERON:0001555,4.38e-08,145;UBERON:0007026,4.38e-08,145;UBERON:0001048,3.27e-07,160;UBERON:0004119,3.72e-07,160;UBERON:0000925,3.72e-07,160;UBERON:0006595,3.72e-07,160 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7771344043031,13.8239445864043,13.2556066435915,16.5440959098591,10.0224544282507,16.8462139568879,11.5954925017741,11.7732879075208,11.1576675514453,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12010778539254,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,2.6124209448053,5.92023468398103,3.530964653288,0,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0,0,0,0.385239660814607,4.71771501024837,0,2.493765180635,0,1.22368352253234,0.358177682162975,0,1.31570429747224,0,0.38582807654183,0,0,0.690860683462397,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p9@C4BPB | |||
}} |
Revision as of 03:13, 12 September 2013
Short description: | p9@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -25bp_to_ENST00000367078_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | P20851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.29e-10 | 253 |
mesothelial cell | 1.75e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.91e-90 | 9 |
upper respiratory tract | 3.03e-42 | 19 |
respiratory primordium | 1.43e-20 | 38 |
endoderm of foregut | 1.43e-20 | 38 |
segment of respiratory tract | 2.08e-16 | 47 |
foregut | 7.88e-15 | 87 |
respiratory tract | 3.98e-14 | 54 |
subdivision of digestive tract | 2.41e-10 | 118 |
respiratory system | 5.58e-10 | 74 |
digestive system | 4.38e-08 | 145 |
digestive tract | 4.38e-08 | 145 |
primitive gut | 4.38e-08 | 145 |
primordium | 3.27e-07 | 160 |
endoderm-derived structure | 3.72e-07 | 160 |
endoderm | 3.72e-07 | 160 |
presumptive endoderm | 3.72e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.02e-14 | 106 |
cell type cancer | 6.14e-10 | 143 |
cancer | 9.20e-10 | 235 |
disease of cellular proliferation | 1.67e-09 | 239 |
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