FFCP PHASE1:Hg19::chr1:155292811..155292840,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23623|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17153|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_ENST00000484664_5end|coexpression_cluster_id=C146|description=CAGE_peak_9_at_RUSC1_5end|id=chr1:155292811..155292840,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;2.65e-09;1!CL:0002591;2.65e-09;1!CL:0002188;1.26e-07;5!CL:0002595;2.76e-07;5|ontology_enrichment_celltype_v019_2=CL:0002553,1.99e-09,1;CL:0002591,3.00e-09,1;CL:0002188,1.24e-07,5;CL:0002595,2.43e-07,5|ontology_enrichment_development_v019=UBERON:0003099;2.65e-09;1!UBERON:0003852;2.65e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003513;5.76e-11;7!UBERON:0003104;8.36e-11;7!UBERON:0009142;8.36e-11;7!UBERON:0005795;2.65e-09;1!UBERON:0005705;2.65e-09;1!UBERON:0002426;2.65e-09;1!UBERON:0003831;2.65e-09;1!UBERON:0003898;2.65e-09;1!UBERON:0004830;2.65e-09;1!UBERON:0008193;2.65e-09;1!UBERON:0010912;2.65e-09;1!UBERON:0002514;2.65e-09;1!UBERON:0003457;2.65e-09;1!UBERON:0008907;2.65e-09;1!UBERON:0008001;2.65e-09;1!UBERON:0003830;2.65e-09;1!UBERON:0005175;2.65e-09;1!UBERON:0007213;2.65e-09;1!UBERON:0009891;2.65e-09;1!UBERON:0007914;2.65e-09;1!UBERON:0001774;2.65e-09;1!UBERON:0007375;2.65e-09;1!UBERON:0003323;2.65e-09;1!UBERON:0010258;2.65e-09;1!UBERON:0005253;2.65e-09;1!UBERON:0007842;2.65e-09;1!UBERON:0001103;2.65e-09;1!UBERON:0002397;2.65e-09;1!UBERON:0003113;2.65e-09;1!UBERON:0003277;2.65e-09;1!UBERON:0001709;2.65e-09;1!UBERON:0002244;2.65e-09;1!UBERON:0005620;2.65e-09;1!UBERON:0010364;2.65e-09;1!UBERON:0004288;2.65e-09;1!UBERON:0003834;2.76e-07;5!UBERON:0001533;2.76e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003513,5.13e-11,7;UBERON:0002426,1.84e-09,1;UBERON:0003831,1.84e-09,1;UBERON:0003898,1.84e-09,1;UBERON:0004830,1.84e-09,1;UBERON:0003830,1.84e-09,1;UBERON:0005175,1.84e-09,1;UBERON:0001774,1.84e-09,1;UBERON:0001103,1.84e-09,1;UBERON:0010084,1.84e-09,1;UBERON:0005705,4.87e-09,1;UBERON:0008193,4.87e-09,1;UBERON:0010912,4.87e-09,1;UBERON:0002514,4.87e-09,1;UBERON:0003457,4.87e-09,1;UBERON:0008907,4.87e-09,1;UBERON:0008001,4.87e-09,1;UBERON:0007213,4.87e-09,1;UBERON:0009891,4.87e-09,1;UBERON:0007914,4.87e-09,1;UBERON:0009292,4.87e-09,1;UBERON:0003099,4.87e-09,1;UBERON:0007375,4.87e-09,1;UBERON:0003323,4.87e-09,1;UBERON:0010258,4.87e-09,1;UBERON:0007842,4.87e-09,1;UBERON:0009494,4.87e-09,1;UBERON:0010042,4.87e-09,1;UBERON:0010045,4.87e-09,1;UBERON:0010259,4.87e-09,1;UBERON:0010359,4.87e-09,1;UBERON:0009526,4.87e-09,1;UBERON:0002397,4.87e-09,1;UBERON:0003113,4.87e-09,1;UBERON:0003277,4.87e-09,1;UBERON:0001709,4.87e-09,1;UBERON:0004066,4.87e-09,1;UBERON:0002244,4.87e-09,1;UBERON:0005620,4.87e-09,1;UBERON:0004362,4.87e-09,1;UBERON:0010364,4.87e-09,1;UBERON:0010046,4.87e-09,1;UBERON:0005868,4.87e-09,1;UBERON:0007238,4.87e-09,1;UBERON:0004288,4.87e-09,1;UBERON:0004068,4.87e-09,1;UBERON:0010334,4.87e-09,1;UBERON:0003852,4.87e-09,1;UBERON:0010253,4.87e-09,1;UBERON:0003834,2.43e-07,5;UBERON:0001533,2.43e-07,5|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.369363174230364,1.63200552995402,0.626909442956176,0,0.273748850145768,0.376627918784408,0,0,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0.189069634328136,0.665188192387692,1.31752178539689,0.327447688744282,0.728590576585084,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0,0.337834441449967,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0.326923806226917,0.302714855289863,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.567160915800105,0,0.213557388818567,0.211931901159562,0,0,0,0.558350568994769,0,0,0,0.276149695926898,0.161646056818812,1.06502877754984,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,2.21446636387394,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.70445216541493,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000484664_5end | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_9_at_RUSC1_5end | |||
|id=chr1:155292811..155292840,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.65e-09;1!CL:0002591;2.65e-09;1!CL:0002188;1.26e-07;5!CL:0002595;2.76e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.99e-09,1;CL:0002591,3.00e-09,1;CL:0002188,1.24e-07,5;CL:0002595,2.43e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.65e-09;1!UBERON:0003852;2.65e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;5.76e-11;7!UBERON:0003104;8.36e-11;7!UBERON:0009142;8.36e-11;7!UBERON:0005795;2.65e-09;1!UBERON:0005705;2.65e-09;1!UBERON:0002426;2.65e-09;1!UBERON:0003831;2.65e-09;1!UBERON:0003898;2.65e-09;1!UBERON:0004830;2.65e-09;1!UBERON:0008193;2.65e-09;1!UBERON:0010912;2.65e-09;1!UBERON:0002514;2.65e-09;1!UBERON:0003457;2.65e-09;1!UBERON:0008907;2.65e-09;1!UBERON:0008001;2.65e-09;1!UBERON:0003830;2.65e-09;1!UBERON:0005175;2.65e-09;1!UBERON:0007213;2.65e-09;1!UBERON:0009891;2.65e-09;1!UBERON:0007914;2.65e-09;1!UBERON:0001774;2.65e-09;1!UBERON:0007375;2.65e-09;1!UBERON:0003323;2.65e-09;1!UBERON:0010258;2.65e-09;1!UBERON:0005253;2.65e-09;1!UBERON:0007842;2.65e-09;1!UBERON:0001103;2.65e-09;1!UBERON:0002397;2.65e-09;1!UBERON:0003113;2.65e-09;1!UBERON:0003277;2.65e-09;1!UBERON:0001709;2.65e-09;1!UBERON:0002244;2.65e-09;1!UBERON:0005620;2.65e-09;1!UBERON:0010364;2.65e-09;1!UBERON:0004288;2.65e-09;1!UBERON:0003834;2.76e-07;5!UBERON:0001533;2.76e-07;5 | |||
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| |||
|short_description=p9@RUSC1 | |||
}} |
Revision as of 00:45, 12 September 2013
Short description: | p9@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RUSC1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 4bp_to_ENST00000484664_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.99e-09 | 1 |
smooth muscle cell of the pulmonary artery | 3.00e-09 | 1 |
glomerular endothelial cell | 1.24e-07 | 5 |
smooth muscle cell of the subclavian artery | 2.43e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.