FFCP PHASE1:Hg19::chr1:153517473..153517536,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6275|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10494|TSSclassifier=S|UniProt=P26447|association_with_transcript=2bp_to_ENST00000368715_5end|description=CAGE_peak_2_at_S100A4_5end|id=chr1:153517473..153517536,-|ontology_enrichment_celltype=CL:0000057!3.04e-14!75;CL:0002620!9.76e-09!23;CL:0000055!7.00e-08!180;CL:0000063!8.48e-07!578|ontology_enrichment_celltype_v019=CL:0002620;8.64e-10;23!CL:0000057;7.37e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,3.95e-15,76;CL:0002620,5.87e-10,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.59e-12!95;UBERON:0002199!4.29e-08!45;UBERON:0002416!4.29e-08!45;UBERON:0002097!1.30e-07!40;UBERON:0004923!7.28e-07!57;UBERON:0005631!9.83e-07!14;UBERON:0000158!9.83e-07!14|ontology_enrichment_uberon_v019=UBERON:0002199;9.45e-08;46!UBERON:0002416;9.45e-08;46!UBERON:0002097;1.07e-07;41!UBERON:0003102;2.22e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.46e-13,99;UBERON:0002199,1.30e-10,46;UBERON:0002416,1.30e-10,46;UBERON:0002097,7.87e-10,41;UBERON:0004923,1.84e-09,66;UBERON:0005631,1.28e-07,14;UBERON:0000158,1.28e-07,14|phase1_expression=3.27021082687002,7.27941781229343,2.96004248601539,15.0109947529696,4.02264984984559,10.4680622892044,0,3.79031924056099,1.82829939739887,0,2.09340350391728,1.96597234917155,1.05506791291381,4.70312141248177,3.64537113300707,0,0.602694528023977,1.46062018077475,0,0.738726348460727,1.42800483870977,0.313454721478088,0.572471974262113,0.410623275218653,1.00434111675842,0,0,0,0.393364276848904,0,0.464448369948228,3.67768489791571,0.90361775633475,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,4.21654892460738,2.64513160582167,4.36651310138069,1.62700325833979,0.411167888021826,0.619412741790207,0,1.2808035326455,1.18241114944293,0.344745680736619,0,4.06279459783025,2.44715041405386,0.818718450173537,2.24723484445085,2.14258724659632,0.962787081228281,1.27867425159808,2.30895910130701,1.99463657621632,2.55734850319616,0.870627715885752,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.368277635987565,0.632924774881769,1.05627643155971,1.4882300997553,1.04829322754188,0.112328631146495,0.150176892841506,0.32145117339416,6.55529310604872,1.79025009479181,2.00930569141097,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,1.05353633910031,1.7703879310245,0.786021525498329,0.822405995998037,1.17030546773475,3.58514493296949,0.946895611469467,0,1.11410456885174,0,0.664601683750863,1.62482318259009,2.30564375506215,1.8208308658383,0.986627427622057,0.276350017785848,0.579606171470105,2.07601188426885,1.33770414044857,3.1360657141493,1.35971211237079,1.14966148080576,1.37450978193052,0.506039384039006,0.95569624297229,0,1.90090408889675,0.903450714466637,1.66382594500744,0,0.473554504088034,2.46338399076314,0.403213486449465,0.802320587350522,0,2.43806866313962,0,0.383587685530591,9.03597880961416,3.00802746381534,6.37324683427624,0,3.89307896242109,0.567208902984407,1.55210578223795,0.790513071238134,0.392937226493138,2.91436230634034,5.56176664176644,0.324547393654683,0.348259474598534,0.531831842075461,0,0.571994910780128,0.74291500265913,0,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0.225222960966644,0,0,0.366403487860815,1.31780417436063,0,2.18047026071267,6.95760732373446,2.02608818663328,0.529636723252875,0.286836620748814,1.06400514659507,3.92474320099615,0,3.7000132262574,1.55605517699883,0.269421344139376,0.980771418680752,0,0,2.57753575017176,5.30672130611545,2.85235910772225,9.56471555531527,2.46612447151906,5.01806127541208,3.51127016755621,5.71631679513701,4.29920110591188,5.3729406211398,3.56400857184616,9.39614331258516,0.910161361938026,0,3.03005005117319,1.50142223846357,3.04770527032601,1.31693286264251,5.21029252858333,5.40857012063748,0.907457465280168,1.25572744982203,5.76604949810132,4.4505699243508,4.20127534518163,8.75946498526731,2.31876486041066,7.07244054060041,1.35021065793013,4.77441325289873,2.52433774244115,9.75728925608373,7.92065678412178,1.77504796258307,4.23158812556089,1.52604533079439,1.93260853163297,1.36373060295417,2.29443676311203,0.487894824518382,0,0,1.0366105501537,0.504641701751257,0,6.25798129319264,5.14592750554308,5.52539685409922,2.78620756819187,10.1063127433742,4.37735160147422,2.52877035117153,3.37415441836875,3.19852520923942,2.61455332910887,2.60997681022206,5.39325232640658,4.90553662813365,2.69323009862473,0,2.80483547606892,1.6462960453256,2.94017422771084,0,0,0,1.32438929824395,0.737930631258681,1.20097467208968,3.07300799144152,2.24803506515239,1.00528972411631,1.38882667737794,1.3032332212413,3.11980435583874,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0.468008530278475,0.148631162288728,6.56136837907439,0.335964256397719,1.8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6275 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10494 | |||
|TSSclassifier=S | |||
|UniProt=P26447 | |||
|association_with_transcript=2bp_to_ENST00000368715_5end | |||
|description=CAGE_peak_2_at_S100A4_5end | |||
|id=chr1:153517473..153517536,- | |||
|ontology_enrichment_celltype=CL:0000057!3.04e-14!75;CL:0002620!9.76e-09!23;CL:0000055!7.00e-08!180;CL:0000063!8.48e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.64e-10;23!CL:0000057;7.37e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.95e-15,76;CL:0002620,5.87e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.59e-12!95;UBERON:0002199!4.29e-08!45;UBERON:0002416!4.29e-08!45;UBERON:0002097!1.30e-07!40;UBERON:0004923!7.28e-07!57;UBERON:0005631!9.83e-07!14;UBERON:0000158!9.83e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;9.45e-08;46!UBERON:0002416;9.45e-08;46!UBERON:0002097;1.07e-07;41!UBERON:0003102;2.22e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.46e-13,99;UBERON:0002199,1.30e-10,46;UBERON:0002416,1.30e-10,46;UBERON:0002097,7.87e-10,41;UBERON:0004923,1.84e-09,66;UBERON:0005631,1.28e-07,14;UBERON:0000158,1.28e-07,14 | |||
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| |||
|short_description=p2@S100A4 | |||
}} |
Revision as of 00:30, 12 September 2013
Short description: | p2@S100A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_S100A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000368715_5end |
EntrezGene: | S100A4 |
HGNC: | 10494 |
UniProt: | P26447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.95e-15 | 76 |
skin fibroblast | 5.87e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.46e-13 | 99 |
integument | 1.30e-10 | 46 |
integumental system | 1.30e-10 | 46 |
skin of body | 7.87e-10 | 41 |
organ component layer | 1.84e-09 | 66 |
extraembryonic membrane | 1.28e-07 | 14 |
membranous layer | 1.28e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.