FFCP PHASE1:Hg19::chr19:45417574..45417589,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=341|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=607|TSSclassifier=S|UniProt=P02654|association_with_transcript=0bp_to_uc002pac.1,uc002pad.1_5end|coexpression_cluster_id=C126|description=CAGE_peak_1_at_APOC1_5end|id=chr19:45417574..45417589,+|ontology_enrichment_celltype=CL:0000147!4.81e-08!14;CL:0000148!8.61e-07!10;CL:0000541!8.61e-07!10|ontology_enrichment_celltype_v019=CL:0000235;1.27e-11;6!CL:0000148;8.54e-08;10!CL:0000147;8.82e-07;14|ontology_enrichment_celltype_v019_2=CL:0000235,1.08e-11,6;CL:0000148,8.42e-08,10;CL:0000541,8.42e-08,10;CL:0000147,8.31e-07,14|ontology_enrichment_development_v019=UBERON:0006601;1.27e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.36e-42!115;UBERON:0001049!1.88e-30!57;UBERON:0005068!1.88e-30!57;UBERON:0006241!1.88e-30!57;UBERON:0007135!1.88e-30!57;UBERON:0005743!1.27e-28!86;UBERON:0000073!3.19e-26!94;UBERON:0001016!3.19e-26!94;UBERON:0001017!7.00e-26!82;UBERON:0002780!1.74e-24!41;UBERON:0001890!1.74e-24!41;UBERON:0006240!1.74e-24!41;UBERON:0002616!6.01e-24!59;UBERON:0003080!1.26e-23!42;UBERON:0003075!6.91e-22!86;UBERON:0007284!6.91e-22!86;UBERON:0000955!1.02e-21!69;UBERON:0006238!1.02e-21!69;UBERON:0002346!2.55e-21!90;UBERON:0002020!2.32e-20!34;UBERON:0003528!2.32e-20!34;UBERON:0001893!5.80e-20!34;UBERON:0002791!2.77e-19!33;UBERON:0001869!6.39e-18!32;UBERON:0003056!6.14e-17!61;UBERON:0002619!2.17e-13!22;UBERON:0000033!1.14e-12!123;UBERON:0000153!1.19e-12!129;UBERON:0007811!1.19e-12!129;UBERON:0002308!3.55e-12!9;UBERON:0000125!3.55e-12!9;UBERON:0002420!5.78e-12!9;UBERON:0007245!5.78e-12!9;UBERON:0010009!5.78e-12!9;UBERON:0010011!5.78e-12!9;UBERON:0000454!5.78e-12!9;UBERON:0004121!1.04e-11!169;UBERON:0000924!1.17e-11!173;UBERON:0006601!1.17e-11!173;UBERON:0001950!1.61e-11!20;UBERON:0000956!3.69e-11!25;UBERON:0000203!3.69e-11!25;UBERON:0009663!5.53e-10!7;UBERON:0003076!5.77e-08!15;UBERON:0003057!5.77e-08!15;UBERON:0002298!1.53e-07!8;UBERON:0000349!8.57e-07!5|ontology_enrichment_uberon_v019=UBERON:0002780;3.25e-21;41!UBERON:0001890;3.25e-21;41!UBERON:0000073;1.34e-20;53!UBERON:0002616;1.34e-20;53!UBERON:0003528;2.15e-20;34!UBERON:0002020;2.15e-20;34!UBERON:0002791;6.64e-20;32!UBERON:0001893;6.50e-19;34!UBERON:0001869;1.43e-17;32!UBERON:0000125;1.92e-17;9!UBERON:0002308;1.92e-17;9!UBERON:0002420;4.48e-17;9!UBERON:0007245;4.48e-17;9!UBERON:0010009;4.48e-17;9!UBERON:0010011;4.48e-17;9!UBERON:0000454;4.48e-17;9!UBERON:0002619;2.73e-14;22!UBERON:0009663;3.59e-14;7!UBERON:0000955;3.60e-14;68!UBERON:0001017;3.90e-14;75!UBERON:0000956;3.62e-12;25!UBERON:0000203;3.62e-12;25!UBERON:0001950;9.66e-12;20!UBERON:0002298;1.60e-10;6!UBERON:0001016;2.36e-10;83!UBERON:0000349;2.42e-09;5!UBERON:0000369;6.99e-09;4!UBERON:0002435;6.99e-09;4!UBERON:0000204;6.99e-09;4!UBERON:0007023;1.25e-08;114!UBERON:0001894;2.32e-08;7!UBERON:0004732;2.61e-07;13!UBERON:0005383;3.48e-07;3!UBERON:0005382;3.48e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.05e-38,56;UBERON:0005068,1.05e-38,56;UBERON:0006241,1.05e-38,56;UBERON:0007135,1.05e-38,56;UBERON:0000073,1.88e-34,53;UBERON:0002616,1.88e-34,53;UBERON:0001017,2.05e-30,81;UBERON:0007023,1.61e-29,114;UBERON:0002780,1.85e-29,41;UBERON:0001890,1.85e-29,41;UBERON:0003080,1.85e-29,41;UBERON:0006240,1.85e-29,41;UBERON:0000955,6.49e-29,68;UBERON:0006238,6.49e-29,68;UBERON:0001016,1.72e-27,89;UBERON:0003075,5.81e-27,82;UBERON:0007284,5.81e-27,82;UBERON:0002346,1.24e-26,86;UBERON:0003528,4.07e-25,34;UBERON:0002020,4.07e-25,34;UBERON:0001893,1.07e-22,34;UBERON:0002791,3.25e-22,32;UBERON:0010371,2.61e-21,104;UBERON:0003056,3.02e-21,61;UBERON:0001869,7.34e-20,32;UBERON:0000125,1.91e-17,9;UBERON:0002308,1.91e-17,9;UBERON:0002420,3.97e-17,9;UBERON:0007245,3.97e-17,9;UBERON:0010009,3.97e-17,9;UBERON:0010011,3.97e-17,9;UBERON:0000454,3.97e-17,9;UBERON:0011216,2.28e-14,223;UBERON:0002619,2.38e-14,22;UBERON:0009663,3.65e-14,7;UBERON:0004121,1.63e-13,171;UBERON:0000924,1.63e-13,171;UBERON:0006601,1.63e-13,171;UBERON:0010314,2.87e-12,132;UBERON:0000956,3.22e-12,25;UBERON:0000203,3.22e-12,25;UBERON:0001950,8.53e-12,20;UBERON:0002298,1.09e-10,6;UBERON:0003076,3.16e-10,15;UBERON:0003057,3.16e-10,15;UBERON:0000025,4.72e-10,192;UBERON:0000349,2.11e-09,5;UBERON:0000369,6.95e-09,4;UBERON:0002435,6.95e-09,4;UBERON:0000204,6.95e-09,4;UBERON:0010082,6.95e-09,4;UBERON:0001894,2.07e-08,7;UBERON:0006222,2.07e-08,7;UBERON:0004732,1.95e-07,13;UBERON:0005383,3.46e-07,3;UBERON:0005382,3.46e-07,3;UBERON:0002784,9.31e-07,4|phase1_expression=0.363356758541113,13.9165340529139,0,0,0,0,0,4.42203911398782,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3153510831958,6.15397965436061,5.6666624879521,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=341 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=607 | |||
|TSSclassifier=S | |||
|UniProt=P02654 | |||
|association_with_transcript=0bp_to_uc002pac.1,uc002pad.1_5end | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_1_at_APOC1_5end | |||
|id=chr19:45417574..45417589,+ | |||
|ontology_enrichment_celltype=CL:0000147!4.81e-08!14;CL:0000148!8.61e-07!10;CL:0000541!8.61e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.27e-11;6!CL:0000148;8.54e-08;10!CL:0000147;8.82e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.08e-11,6;CL:0000148,8.42e-08,10;CL:0000541,8.42e-08,10;CL:0000147,8.31e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.36e-42!115;UBERON:0001049!1.88e-30!57;UBERON:0005068!1.88e-30!57;UBERON:0006241!1.88e-30!57;UBERON:0007135!1.88e-30!57;UBERON:0005743!1.27e-28!86;UBERON:0000073!3.19e-26!94;UBERON:0001016!3.19e-26!94;UBERON:0001017!7.00e-26!82;UBERON:0002780!1.74e-24!41;UBERON:0001890!1.74e-24!41;UBERON:0006240!1.74e-24!41;UBERON:0002616!6.01e-24!59;UBERON:0003080!1.26e-23!42;UBERON:0003075!6.91e-22!86;UBERON:0007284!6.91e-22!86;UBERON:0000955!1.02e-21!69;UBERON:0006238!1.02e-21!69;UBERON:0002346!2.55e-21!90;UBERON:0002020!2.32e-20!34;UBERON:0003528!2.32e-20!34;UBERON:0001893!5.80e-20!34;UBERON:0002791!2.77e-19!33;UBERON:0001869!6.39e-18!32;UBERON:0003056!6.14e-17!61;UBERON:0002619!2.17e-13!22;UBERON:0000033!1.14e-12!123;UBERON:0000153!1.19e-12!129;UBERON:0007811!1.19e-12!129;UBERON:0002308!3.55e-12!9;UBERON:0000125!3.55e-12!9;UBERON:0002420!5.78e-12!9;UBERON:0007245!5.78e-12!9;UBERON:0010009!5.78e-12!9;UBERON:0010011!5.78e-12!9;UBERON:0000454!5.78e-12!9;UBERON:0004121!1.04e-11!169;UBERON:0000924!1.17e-11!173;UBERON:0006601!1.17e-11!173;UBERON:0001950!1.61e-11!20;UBERON:0000956!3.69e-11!25;UBERON:0000203!3.69e-11!25;UBERON:0009663!5.53e-10!7;UBERON:0003076!5.77e-08!15;UBERON:0003057!5.77e-08!15;UBERON:0002298!1.53e-07!8;UBERON:0000349!8.57e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.25e-21;41!UBERON:0001890;3.25e-21;41!UBERON:0000073;1.34e-20;53!UBERON:0002616;1.34e-20;53!UBERON:0003528;2.15e-20;34!UBERON:0002020;2.15e-20;34!UBERON:0002791;6.64e-20;32!UBERON:0001893;6.50e-19;34!UBERON:0001869;1.43e-17;32!UBERON:0000125;1.92e-17;9!UBERON:0002308;1.92e-17;9!UBERON:0002420;4.48e-17;9!UBERON:0007245;4.48e-17;9!UBERON:0010009;4.48e-17;9!UBERON:0010011;4.48e-17;9!UBERON:0000454;4.48e-17;9!UBERON:0002619;2.73e-14;22!UBERON:0009663;3.59e-14;7!UBERON:0000955;3.60e-14;68!UBERON:0001017;3.90e-14;75!UBERON:0000956;3.62e-12;25!UBERON:0000203;3.62e-12;25!UBERON:0001950;9.66e-12;20!UBERON:0002298;1.60e-10;6!UBERON:0001016;2.36e-10;83!UBERON:0000349;2.42e-09;5!UBERON:0000369;6.99e-09;4!UBERON:0002435;6.99e-09;4!UBERON:0000204;6.99e-09;4!UBERON:0007023;1.25e-08;114!UBERON:0001894;2.32e-08;7!UBERON:0004732;2.61e-07;13!UBERON:0005383;3.48e-07;3!UBERON:0005382;3.48e-07;3 | |||
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|short_description=p1@APOC1 | |||
}} |
Revision as of 21:09, 11 September 2013
Short description: | p1@APOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_APOC1_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | 0bp_to_uc002pac.1, uc002pad.1_5end |
EntrezGene: | APOC1 |
HGNC: | 607 |
UniProt: | P02654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.08e-11 | 6 |
melanocyte | 8.42e-08 | 10 |
melanoblast | 8.42e-08 | 10 |
pigment cell | 8.31e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.